Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0516 Selaginella moellendorffii HOM05D001153 ORTHO05D000949 5.7e-52 207.2 98 100.0
SMO356G0317 Selaginella moellendorffii HOM05D001153 ORTHO05D000949 4.5e-09 64.7 93 37.6
THA.LOC104819034 Tarenaya hassleriana HOM05D001153 ORTHO05D000949 1.7e-08 62.8 89 36.0
Manes.12G063600 Manihot esculenta HOM05D001153 ORTHO05D000949 6.5e-08 60.8 93 35.5
BcaB08g34467 Brassica carinata HOM05D001153 ORTHO05D000949 1.1e-07 60.1 72 43.1
C03p54720 Brassica napus HOM05D001153 ORTHO05D000949 2.5e-07 58.9 89 36.0
LjContig00081g0013704 Lotus japonicus HOM05D007947 ORTHO05D010018 2.5e-07 58.9 94 39.4
Aa31sc202G20 Aethionema arabicum HOM05D001153 ORTHO05D000949 3.2e-07 58.5 90 37.8
HanXRQChr03g0075021 Helianthus annuus HOM05D001153 ORTHO05D000949 4.2e-07 58.2 94 37.2
Nitab4.5_0006992g0080 Nicotiana tabacum HOM05D001153 ORTHO05D000949 4.2e-07 58.2 76 43.4
Peaxi162Scf00652g00120 Petunia axillaris HOM05D002186 ORTHO05D002225 5.5e-07 57.8 60 46.7
SalBow8G5236 Salvia bowleyana HOM05D001153 ORTHO05D000949 5.5e-07 57.8 95 35.8
Manes.13G061000 Manihot esculenta HOM05D001153 ORTHO05D000949 7.2e-07 57.4 96 40.6
Carub.0003s2606 Capsella rubella HOM05D001153 ORTHO05D000949 9.4e-07 57.0 89 36.0
AL3G42050 Arabidopsis lyrata HOM05D001153 ORTHO05D000949 1.2e-06 56.6 89 36.0
AT2G04410 Arabidopsis thaliana HOM05D001153 ORTHO05D000949 1.2e-06 56.6 89 36.0
Dinv38201 Davidia involucrata HOM05D002186 ORTHO05D002225 1.2e-06 56.6 36 66.7
Thhalv10002884m.g Eutrema salsugineum HOM05D001153 ORTHO05D000949 1.2e-06 56.6 89 36.0
Thhalv10015980m.g Eutrema salsugineum HOM05D001153 ORTHO05D000949 1.2e-06 56.6 61 45.9
Sp3g23220 Schrenkiella parvula HOM05D001153 ORTHO05D000949 1.2e-06 56.6 89 36.0
Thecc.01G197300 Theobroma cacao HOM05D001153 ORTHO05D000949 1.2e-06 56.6 89 38.2
AL8G31420 Arabidopsis lyrata HOM05D001153 ORTHO05D000949 1.6e-06 56.2 59 45.8
A03p44310 Brassica napus HOM05D001153 ORTHO05D000949 1.6e-06 56.2 82 46.3
BraA03t10682Z Brassica rapa HOM05D001153 ORTHO05D000949 1.6e-06 56.2 61 45.9
BraA03t13560Z Brassica rapa HOM05D001153 ORTHO05D000949 1.6e-06 56.2 82 46.3
CARHR102270 Cardamine hirsuta HOM05D001153 ORTHO05D000949 1.6e-06 56.2 53 52.8
ECA236G3499 Erigeron canadensis HOM05D001153 ORTHO05D000949 1.6e-06 56.2 94 37.2
Sed0001295 Sechium edule HOM05D001153 ORTHO05D000949 1.6e-06 56.2 48 52.1
Sed0006284 Sechium edule HOM05D001153 ORTHO05D000949 1.6e-06 56.2 58 48.3
ECA240G1767 Erigeron canadensis HOM05D001153 ORTHO05D000949 2.1e-06 55.8 94 37.2
Nitab4.5_0009864g0050 Nicotiana tabacum HOM05D001153 ORTHO05D000949 2.1e-06 55.8 46 58.7
Aqoxy1G04269 Aquilegia oxysepala HOM05D001153 ORTHO05D000949 2.7e-06 55.5 56 50.0
A10p13070 Brassica napus HOM05D001153 ORTHO05D000949 2.7e-06 55.5 59 45.8
CAN.G437.16 Capsicum annuum HOM05D001153 ORTHO05D000949 2.7e-06 55.5 95 38.9
MELO3C025943.2 Cucumis melo HOM05D001153 ORTHO05D000949 2.7e-06 55.5 41 58.5
Gohir.A11G148400 Gossypium hirsutum HOM05D001153 ORTHO05D000949 2.7e-06 55.5 42 61.9
Gohir.D11G155200 Gossypium hirsutum HOM05D001153 ORTHO05D000949 2.7e-06 55.5 42 61.9
Gorai.007G165500 Gossypium raimondii HOM05D001153 ORTHO05D000949 2.7e-06 55.5 42 61.9
MD09G1128500 Malus domestica HOM05D001153 ORTHO05D000949 2.7e-06 55.5 66 47.0
Zm00001eb210800 Zea mays HOM05D002186 ORTHO05D002225 2.7e-06 55.5 33 69.7
Zm00001eb380850 Zea mays HOM05D001153 ORTHO05D000949 2.7e-06 55.5 46 52.2
Aa31sc762G20 Aethionema arabicum HOM05D001153 ORTHO05D000949 3.6e-06 55.1 45 55.6
AT5G55850 Arabidopsis thaliana HOM05D001153 ORTHO05D000949 3.6e-06 55.1 59 45.8
CAN.G767.9 Capsicum annuum HOM05D002186 ORTHO05D002225 3.6e-06 55.1 61 44.3
Duzib133G1150 Durio zibethinus HOM05D001153 ORTHO05D000949 3.6e-06 55.1 44 56.8
HanXRQChr08g0225911 Helianthus annuus HOM05D001153 ORTHO05D000949 3.6e-06 55.1 69 44.9
HanXRQChr10g0306831 Helianthus annuus HOM05D001153 ORTHO05D000949 3.6e-06 55.1 40 60.0
Solyc12g098440.2 Solanum lycopersicum HOM05D002186 ORTHO05D002225 3.6e-06 55.1 61 44.3
Sopen12g033220 Solanum pennellii HOM05D002186 ORTHO05D002225 3.6e-06 55.1 61 44.3
PGSC0003DMG400004571 Solanum tuberosum HOM05D002186 ORTHO05D002225 3.6e-06 55.1 61 44.3
BcaC01g03299 Brassica carinata HOM05D001153 ORTHO05D000949 4.7e-06 54.7 89 34.8
A03p13790 Brassica napus HOM05D001153 ORTHO05D000949 4.7e-06 54.7 59 45.8
C03p16220 Brassica napus HOM05D001153 ORTHO05D000949 4.7e-06 54.7 59 45.8
BolC2t07686H Brassica oleracea HOM05D001153 ORTHO05D000949 4.7e-06 54.7 62 46.8
BolC3t14045H Brassica oleracea HOM05D001153 ORTHO05D000949 4.7e-06 54.7 59 45.8
BolC3t17664H Brassica oleracea HOM05D001153 ORTHO05D000949 4.7e-06 54.7 89 34.8
Carub.0008s1620 Capsella rubella HOM05D001153 ORTHO05D000949 4.7e-06 54.7 59 45.8
Sp6g17730 Schrenkiella parvula HOM05D001153 ORTHO05D000949 4.7e-06 54.7 59 45.8
Solyc07g045340.4 Solanum lycopersicum HOM05D001153 ORTHO05D000949 4.7e-06 54.7 46 60.9
Sopen07g023880 Solanum pennellii HOM05D001153 ORTHO05D000949 4.7e-06 54.7 46 60.9
PGSC0003DMG402017380 Solanum tuberosum HOM05D001153 ORTHO05D000949 4.7e-06 54.7 46 60.9
THA.LOC104808840 Tarenaya hassleriana HOM05D001153 ORTHO05D000949 4.7e-06 54.7 50 50.0
BcaC01g03207 Brassica carinata HOM05D001153 ORTHO05D000949 6.1e-06 54.3 50 54.0
CSS0016091 Camellia sinensis var. sinensis HOM05D002186 ORTHO05D002225 6.1e-06 54.3 59 44.1
Cpa.g.sc211.36 Carica papaya HOM05D001153 ORTHO05D000949 6.1e-06 54.3 48 52.1
Duzib138G0703 Durio zibethinus HOM05D001153 ORTHO05D000949 6.1e-06 54.3 32 71.9
Medtr8g089560 Medicago truncatula HOM05D001153 ORTHO05D000949 6.1e-06 54.3 38 60.5
THA.LOC104822437 Tarenaya hassleriana HOM05D001153 ORTHO05D000949 6.1e-06 54.3 53 52.8
TWI18G0320 Tripterygium wilfordii HOM05D001153 ORTHO05D000949 6.1e-06 54.3 32 71.9
VMungo0331G2000 Vigna mungo HOM05D002186 ORTHO05D002225 6.1e-06 54.3 51 52.9
BcaB08g35954 Brassica carinata HOM05D001827 ORTHO05D001790 8.0e-06 53.9 63 42.9
CSS0005019 Camellia sinensis var. sinensis HOM05D001153 ORTHO05D000949 8.0e-06 53.9 38 63.2
ClCG02G009120 Citrullus lanatus HOM05D001153 ORTHO05D000949 8.0e-06 53.9 48 52.1
Sed0003830 Sechium edule HOM05D001153 ORTHO05D000949 8.0e-06 53.9 96 35.4
SMO143G0047 Selaginella moellendorffii HOM05D001153 ORTHO05D000949 8.0e-06 53.9 35 65.7
THA.LOC104826632 Tarenaya hassleriana HOM05D001153 ORTHO05D000949 8.0e-06 53.9 59 50.8
unitig_747.g21637 Utricularia gibba HOM05D001153 ORTHO05D000949 8.0e-06 53.9 54 51.9


User provided reference genes

Program Settings