Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0489 Selaginella moellendorffii HOM05D005223 ORTHO05D006449 0.0e+00 1798.9 909 100.0
Pp3c24_17160 Physcomitrium patens HOM05D005223 ORTHO05D006449 5.4e-157 559.3 1029 36.2
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 4.2e-149 533.1 985 36.4
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 3.5e-148 530.0 938 36.6
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 1.1e-146 525.0 902 37.0
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 9.6e-146 521.9 965 37.3
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 5.3e-144 516.2 973 36.6
Mapoly0075s0016 Marchantia polymorpha HOM05D005223 ORTHO05D006449 5.3e-144 516.2 979 35.1
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 6.9e-144 515.8 907 36.7
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 3.4e-143 513.5 978 36.6
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 1.7e-142 511.1 905 37.0
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 2.9e-142 510.4 900 37.9
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 1.4e-141 508.1 963 36.4
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 1.9e-141 507.7 970 36.2
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 2.5e-141 507.3 965 36.3
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 2.5e-141 507.3 883 38.3
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 4.2e-141 506.5 974 35.9
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 7.1e-141 505.8 902 37.4
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 7.1e-141 505.8 964 36.0
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 9.3e-141 505.4 961 36.1
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 2.7e-140 503.8 967 36.1
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 3.5e-140 503.4 901 37.5
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 7.9e-140 502.3 894 36.4
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 1.0e-139 501.9 951 35.3
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 8.7e-139 498.8 897 36.6
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 1.5e-138 498.0 974 35.6
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 1.5e-138 498.0 891 36.9
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 1.9e-138 497.7 907 36.9
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 2.5e-138 497.3 955 35.7
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 2.5e-138 497.3 958 35.0
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 2.5e-138 497.3 905 36.6
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 3.3e-138 496.9 977 36.3
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 4.3e-138 496.5 905 35.4
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 5.6e-138 496.1 903 36.8
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 7.4e-138 495.7 890 37.5
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 1.6e-137 494.6 907 35.6
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.6e-137 494.6 951 35.1
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 2.1e-137 494.2 963 35.6
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 2.8e-137 493.8 907 35.6
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 3.7e-137 493.4 902 36.5
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 6.2e-137 492.7 900 36.3
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 8.2e-137 492.3 893 36.6
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 8.2e-137 492.3 905 36.7
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 1.8e-136 491.1 911 36.4
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 2.4e-136 490.7 959 35.5
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 4.0e-136 490.0 910 36.5
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 5.3e-136 489.6 958 35.3
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 6.9e-136 489.2 946 35.8
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 9.0e-136 488.8 906 36.1
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 1.2e-135 488.4 953 35.0
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 2.6e-135 487.3 951 34.5
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 3.4e-135 486.9 915 36.9
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 2.2e-134 484.2 954 35.3
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 2.2e-134 484.2 900 37.3
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 2.9e-134 483.8 903 37.1
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 3.8e-134 483.4 955 35.0
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 4.9e-134 483.0 893 36.8
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 4.9e-134 483.0 907 36.2
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 4.9e-134 483.0 901 36.7
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 8.4e-134 482.3 956 35.4
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 1.4e-133 481.5 894 37.0
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 2.5e-133 480.7 905 34.5
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 3.2e-133 480.3 906 36.1
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 5.5e-133 479.6 899 36.7
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 7.1e-133 479.2 953 35.0
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 7.1e-133 479.2 993 34.3
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 7.1e-133 479.2 953 35.5
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 9.3e-133 478.8 901 35.4
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 1.6e-132 478.0 959 34.6
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 6.0e-132 476.1 965 35.0
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 1.8e-131 474.6 895 36.5
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 3.0e-131 473.8 907 36.1
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 6.7e-131 472.6 880 36.6
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 1.1e-130 471.9 894 36.0
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 1.5e-130 471.5 894 35.9
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 4.3e-130 469.9 925 34.4
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 7.4e-130 469.2 899 34.9
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 3.7e-129 466.8 905 35.4
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 3.7e-129 466.8 881 36.8
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 3.1e-128 463.8 909 35.6
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 3.1e-128 463.8 923 35.1
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 2.9e-126 457.2 905 34.9
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 1.9e-125 454.5 975 33.7
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 2.7e-124 450.7 893 34.2
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 7.9e-124 449.1 928 33.4
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.0e-123 448.7 904 34.0
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 1.4e-123 448.4 878 35.3
COL.COLO4_09267 Corchorus olitorius HOM05D005223 ORTHO05D006449 6.7e-123 446.0 762 38.7
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 2.0e-122 444.5 844 35.9
Glyma.06G172900 Glycine max HOM05D005223 ORTHO05D006449 1.1e-120 438.7 731 38.7
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 6.9e-120 436.0 846 35.0
SGA_v2.0_scaffold50G18602 Striga asiatica HOM05D005223 ORTHO05D006449 9.1e-120 435.6 819 36.8
arahy.Tifrunner.gnm1.ann1.9N92ER Arachis hypogaea HOM05D005223 ORTHO05D006449 5.9e-119 433.0 726 38.3
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 2.5e-117 427.6 930 33.9
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 1.6e-116 424.9 891 34.3
Os02g0599100 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 1.6e-108 398.3 612 40.8
Os02g0598400 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 8.0e-108 396.0 612 41.0
CBR_g45764 Chara braunii HOM05D005223 ORTHO05D006449 1.4e-88 332.0 1113 27.3
CBR_g52378 Chara braunii HOM05D005223 ORTHO05D006449 7.7e-87 326.2 1126 27.4
Aa31LG4G17060 Aethionema arabicum HOM05D005223 ORTHO05D006449 1.5e-82 312.0 576 36.6
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 2.8e-81 307.8 852 30.5
SHI10647 Sapria himalayana HOM05D005223 ORTHO05D006449 8.0e-68 263.1 514 37.4
Cpa.g.sc52.35 Carica papaya HOM05D005223 ORTHO05D006449 2.7e-63 248.1 516 36.6
Oeu007006.1 Olea europaea HOM05D005223 ORTHO05D006449 3.0e-62 244.6 306 46.1
CSS0005553 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 3.9e-62 244.2 629 30.8
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 9.2e-56 223.0 524 30.2
FvH4_5g07461 Fragaria vesca HOM05D005223 ORTHO05D006449 2.7e-31 141.7 309 34.3
Cre03.g186550 Chlamydomonas reinhardtii HOM05D005223 ORTHO05D006449 9.6e-29 133.3 426 29.1
Oeu057221.1 Olea europaea HOM05D005223 ORTHO05D006449 1.1e-27 129.8 372 27.7
Aa31LG4G17050 Aethionema arabicum HOM05D005223 ORTHO05D006449 3.1e-27 128.3 371 27.5
MCO03G522 Micromonas commoda HOM05D005223 ORTHO05D006449 5.7e-21 107.5 1032 21.1
PRCOL_00001784 Prasinoderma coloniale HOM05D005223 ORTHO05D006449 7.4e-21 107.1 315 31.1
FvH4_3g25520 Fragaria vesca HOM05D005223 ORTHO05D006449 5.3e-19 100.9 247 27.9
MD06G1153900 Malus domestica HOM05D005223 ORTHO05D006449 8.4e-17 93.6 117 47.0
Nn8g40428 Nelumbo nucifera HOM05D005223 ORTHO05D006449 8.4e-17 93.6 100 51.0
MBI11_g36316_MAGBIO Magnolia biondii HOM05D005223 ORTHO05D006449 1.9e-16 92.4 137 35.8
AagrBONN_evm.TU.Sc2ySwM_228.970 Anthoceros agrestis HOM05D005223 ORTHO05D006449 5.5e-16 90.9 205 29.8
Cpa.g.sc52.34 Carica papaya HOM05D005223 ORTHO05D006449 2.1e-15 89.0 225 25.8
SEGI_02888 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 7.9e-15 87.0 126 39.7
SalBow5G3736 Salvia bowleyana HOM05D005223 ORTHO05D006449 7.7e-10 70.5 78 47.4
SEGI_05777 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 5.0e-09 67.8 116 33.6
Nn7g38107 Nelumbo nucifera HOM05D005223 ORTHO05D006449 3.6e-07 61.6 104 41.3
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 1.0e-06 60.1 125 39.2


User provided reference genes

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