Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 3.2e-110 401.7 201 100.0
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 1.1e-28 131.0 173 41.0
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 2.4e-28 129.8 187 41.2
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 7.1e-25 118.2 158 43.7
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 2.1e-24 116.7 108 53.7
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 2.1e-24 116.7 161 44.1
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 3.5e-24 115.9 116 53.4
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 4.6e-24 115.5 167 42.5
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 7.8e-24 114.8 110 52.7
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 1.3e-23 114.0 162 43.8
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 1.7e-23 113.6 108 53.7
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 2.3e-23 113.2 103 55.3
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 3.0e-23 112.8 108 52.8
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 3.0e-23 112.8 108 51.9
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 3.9e-23 112.5 162 41.4
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 3.9e-23 112.5 103 54.4
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 3.9e-23 112.5 117 52.1
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 3.9e-23 112.5 103 54.4
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 3.9e-23 112.5 108 53.7
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 3.9e-23 112.5 108 53.7
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 3.9e-23 112.5 103 54.4
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 5.1e-23 112.1 108 53.7
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 6.6e-23 111.7 103 53.4
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 6.6e-23 111.7 109 53.2
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 6.6e-23 111.7 109 52.3
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 6.6e-23 111.7 162 42.0
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 8.7e-23 111.3 111 52.3
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 8.7e-23 111.3 108 50.9
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 8.7e-23 111.3 103 54.4
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 8.7e-23 111.3 120 48.3
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 8.7e-23 111.3 112 50.9
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 8.7e-23 111.3 108 54.6
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 8.7e-23 111.3 99 54.5
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 8.7e-23 111.3 109 53.2
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 8.7e-23 111.3 103 54.4
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 1.1e-22 110.9 109 55.0
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 1.1e-22 110.9 108 53.7
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 1.1e-22 110.9 110 51.8
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-22 110.9 110 51.8
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.1e-22 110.9 110 51.8
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 1.5e-22 110.5 105 53.3
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 1.5e-22 110.5 103 54.4
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 1.5e-22 110.5 103 55.3
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.5e-22 110.5 108 50.9
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 1.5e-22 110.5 103 53.4
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 1.5e-22 110.5 169 40.8
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.9e-22 110.2 109 50.5
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.9e-22 110.2 120 48.3
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.9e-22 110.2 153 41.8
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 1.9e-22 110.2 109 53.2
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.5e-22 109.8 175 42.3
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 2.5e-22 109.8 108 51.9
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 2.5e-22 109.8 103 53.4
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 2.5e-22 109.8 99 53.5
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 3.3e-22 109.4 164 40.9
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.3e-22 109.4 110 51.8
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 3.3e-22 109.4 109 52.3
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 3.3e-22 109.4 108 52.8
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 3.3e-22 109.4 92 56.5
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 4.3e-22 109.0 92 57.6
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 4.3e-22 109.0 92 57.6
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 4.3e-22 109.0 92 57.6
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 4.3e-22 109.0 110 51.8
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 4.3e-22 109.0 110 51.8
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 4.3e-22 109.0 163 41.1
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 5.6e-22 108.6 108 49.1
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 5.6e-22 108.6 99 54.5
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 5.6e-22 108.6 108 52.8
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 5.6e-22 108.6 119 51.3
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 5.6e-22 108.6 161 40.4
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 7.3e-22 108.2 98 52.0
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 9.6e-22 107.8 105 53.3
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.2e-21 107.5 92 56.5
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 1.2e-21 107.5 92 56.5
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.2e-21 107.5 98 54.1
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 1.2e-21 107.5 163 41.1
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.2e-21 107.5 109 48.6
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.2e-21 107.5 120 47.5
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 1.6e-21 107.1 205 38.0
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 1.6e-21 107.1 120 45.8
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 2.1e-21 106.7 105 52.4
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 2.1e-21 106.7 105 52.4
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 2.1e-21 106.7 161 40.4
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.1e-21 106.7 110 50.9
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 2.8e-21 106.3 159 38.4
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 3.6e-21 105.9 108 51.9
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 3.6e-21 105.9 102 51.0
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 4.7e-21 105.5 120 45.0
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 4.7e-21 105.5 105 52.4
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 4.7e-21 105.5 97 52.6
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 4.7e-21 105.5 92 55.4
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.7e-21 105.5 92 55.4
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.7e-21 105.5 92 55.4
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 6.2e-21 105.1 136 41.9
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 6.2e-21 105.1 170 40.0
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 8.1e-21 104.8 110 50.0
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.1e-20 104.4 92 55.4
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.4e-20 104.0 92 54.3
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 2.4e-20 103.2 162 39.5
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 2.4e-20 103.2 101 52.5
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 4.0e-20 102.4 92 54.3
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 5.3e-20 102.1 109 47.7
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 9.0e-20 101.3 111 47.7
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.5e-19 100.5 109 48.6
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 1.5e-19 100.5 158 41.1
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 2.6e-19 99.8 103 48.5
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 3.4e-19 99.4 92 52.2
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 1.4e-17 94.0 99 47.5
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 1.9e-17 93.6 90 52.2
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.6e-13 80.5 98 44.9
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 6.9e-12 75.1 142 35.9
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 2.1e-08 63.5 71 43.7
Oeu010083.1 Olea europaea HOM05D003094 ORTHO05D003482 4.6e-08 62.4 141 30.5
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 8.7e-07 58.2 90 41.1
MCO03G327 Micromonas commoda HOM05D003094 ORTHO05D003482 4.3e-06 55.8 115 33.0


User provided reference genes

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