Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0458 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 3.0e-193 678.3 341 100.0
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 2.2e-74 283.5 337 43.6
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.7e-71 273.9 309 46.3
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 2.5e-70 270.0 335 43.6
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 6.1e-69 265.4 330 42.1
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 6.1e-69 265.4 329 43.5
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.2e-68 262.3 343 41.1
FAN18G3563 Fragaria x ananassa HOM05D002875 ORTHO05D003215 6.7e-68 261.9 338 41.4
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 4.4e-67 259.2 320 41.6
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 5.7e-67 258.8 312 42.0
SMO351G0397 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 5.7e-67 258.8 316 44.3
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 7.4e-67 258.5 311 41.5
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 9.7e-67 258.1 337 42.1
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 9.7e-67 258.1 338 40.8
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.7e-66 257.3 330 40.6
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 2.8e-66 256.5 311 41.2
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 3.7e-66 256.1 311 41.2
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 3.7e-66 256.1 336 40.5
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 6.3e-66 255.4 335 41.2
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.1e-65 254.6 337 41.2
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 2.4e-65 253.4 319 40.4
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 5.3e-65 252.3 315 40.3
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 5.3e-65 252.3 320 42.2
FAN08G3091 Fragaria x ananassa HOM05D002875 ORTHO05D003215 7.0e-65 251.9 338 40.2
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 9.1e-65 251.5 361 39.3
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 9.1e-65 251.5 336 39.0
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 1.6e-64 250.8 335 41.5
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 2.0e-64 250.4 312 41.7
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 2.0e-64 250.4 337 39.8
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 2.6e-64 250.0 338 42.0
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 5.9e-64 248.8 333 40.2
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 5.9e-64 248.8 336 40.2
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.7e-63 247.3 336 41.7
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.7e-63 247.3 336 39.6
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 3.8e-63 246.1 338 39.1
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 3.8e-63 246.1 340 39.1
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.8e-63 246.1 311 40.2
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 3.8e-63 246.1 313 40.3
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 1.5e-62 244.2 332 40.7
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.9e-62 243.8 335 41.2
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 3.2e-62 243.0 336 37.5
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 3.2e-62 243.0 337 38.3
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 4.2e-62 242.7 343 38.2
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 9.4e-62 241.5 338 38.5
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 9.4e-62 241.5 314 38.9
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 9.4e-62 241.5 323 39.6
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 1.6e-61 240.7 323 39.6
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 1.6e-61 240.7 343 37.9
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 2.1e-61 240.4 315 39.0
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 2.1e-61 240.4 336 38.7
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 6.1e-61 238.8 311 38.9
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 8.0e-61 238.4 312 39.7
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 8.0e-61 238.4 333 38.4
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 1.0e-60 238.0 277 43.7
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 1.8e-60 237.3 333 38.7
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 1.8e-60 237.3 317 41.3
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 2.3e-60 236.9 335 40.0
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.3e-60 236.9 335 39.7
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 2.3e-60 236.9 335 38.8
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 2.3e-60 236.9 330 38.8
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 3.0e-60 236.5 314 38.2
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 3.0e-60 236.5 323 39.6
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 3.0e-60 236.5 339 38.3
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 3.0e-60 236.5 324 39.2
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 4.0e-60 236.1 323 39.0
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 4.0e-60 236.1 323 39.0
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 5.2e-60 235.7 311 40.2
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 6.7e-60 235.3 338 37.9
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 6.7e-60 235.3 330 38.8
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.2e-59 234.6 338 37.0
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.0e-59 233.8 312 39.1
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 2.6e-59 233.4 339 38.6
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 3.3e-59 233.0 337 37.4
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 3.3e-59 233.0 323 38.4
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 4.4e-59 232.6 330 38.2
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 5.7e-59 232.3 313 40.9
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 5.7e-59 232.3 313 42.2
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 5.7e-59 232.3 323 37.8
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 5.7e-59 232.3 337 37.4
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 7.5e-59 231.9 323 37.8
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 9.7e-59 231.5 306 38.6
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.3e-58 231.1 310 40.3
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.3e-58 231.1 334 37.7
Pp3c1_22410 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.3e-58 231.1 341 37.8
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 2.8e-58 229.9 332 38.0
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 3.7e-58 229.6 312 36.9
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 3.7e-58 229.6 339 38.1
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 8.2e-58 228.4 335 38.5
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 8.2e-58 228.4 335 38.5
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.1e-57 228.0 334 38.3
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.4e-57 227.6 338 35.5
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.8e-57 227.3 337 36.5
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 1.8e-57 227.3 330 37.9
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 4.1e-57 226.1 315 39.4
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.1e-57 226.1 339 35.7
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 2.0e-56 223.8 323 36.2
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 2.7e-56 223.4 339 35.7
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 4.5e-56 222.6 311 38.3
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 4.5e-56 222.6 338 38.2
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 4.5e-56 222.6 314 36.9
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 5.9e-56 222.2 307 38.8
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 5.9e-56 222.2 337 36.2
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 7.7e-56 221.9 340 38.2
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 1.0e-55 221.5 311 37.9
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 1.0e-55 221.5 330 36.7
MBI07_g16947_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 1.0e-55 221.5 278 39.2
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.3e-55 221.1 339 36.0
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 1.7e-55 220.7 341 36.7
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 2.2e-55 220.3 352 35.8
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.2e-55 220.3 314 37.9
RcHm_v2.0_Chr2g0175571 Rosa chinensis HOM05D002875 ORTHO05D003215 2.9e-55 219.9 339 35.4
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 5.0e-55 219.2 343 36.7
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 8.5e-55 218.4 313 37.7
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.1e-54 218.0 315 36.5
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 9.4e-54 214.9 313 38.7
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 9.4e-54 214.9 305 38.4
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.2e-53 214.5 338 36.4
Gohir.A05G338300 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.2e-53 214.5 293 39.2
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 1.6e-53 214.2 335 36.1
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 1.6e-53 214.2 328 35.7
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 3.6e-53 213.0 317 36.9
Hma1.2p1_0046F.1_g026650 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 8.0e-53 211.8 268 39.2
QL10p009910 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-52 211.5 350 36.9
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-52 211.5 351 36.2
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.8e-52 210.7 315 37.1
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 3.0e-52 209.9 340 36.2
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 3.0e-52 209.9 329 35.9
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 5.2e-52 209.1 351 35.9
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 6.8e-52 208.8 337 38.0
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 8.8e-52 208.4 254 40.9
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.5e-51 207.6 317 36.6
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 3.4e-51 206.5 308 35.7
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 4.4e-51 206.1 315 37.8
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 9.8e-51 204.9 314 36.6
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 2.8e-50 203.4 334 34.7
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-50 203.0 349 37.2
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 8.3e-50 201.8 315 35.6
PSO017G1731 Papaver somniferum HOM05D002875 ORTHO05D003215 8.3e-50 201.8 283 35.7
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 5.4e-49 199.1 317 35.6
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 9.1e-49 198.4 275 36.0
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 1.2e-48 198.0 341 34.6
QL10p009146 Quercus lobata HOM05D002875 ORTHO05D003215 2.0e-48 197.2 354 34.2
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 2.7e-48 196.8 349 37.5
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 1.7e-47 194.1 349 32.4
Duzib187G0424 Durio zibethinus HOM05D002875 ORTHO05D003215 5.0e-47 192.6 305 36.4
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 6.5e-47 192.2 349 34.7
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 3.2e-46 189.9 344 36.6
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 1.2e-45 188.0 325 33.5
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 3.6e-45 186.4 285 33.3
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 3.6e-45 186.4 349 34.1
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 4.7e-45 186.0 339 33.3
CSS0041826 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 6.1e-45 185.7 317 35.0
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 1.8e-44 184.1 351 34.2
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 3.0e-44 183.3 350 34.0
QL10p009307 Quercus lobata HOM05D002875 ORTHO05D003215 4.0e-44 183.0 355 34.4
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 4.4e-43 179.5 318 31.1
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 1.3e-42 177.9 323 35.6
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 7.8e-40 168.7 215 41.9
PSO017G4267 Papaver somniferum HOM05D002875 ORTHO05D003215 1.5e-38 164.5 242 34.7
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.3e-38 163.3 334 30.8
GSVIVG01033092001 Vitis vinifera HOM05D002875 ORTHO05D003215 8.0e-37 158.7 176 43.8
TPR.G14262 Trifolium pratense HOM05D002875 ORTHO05D003215 2.2e-34 150.6 225 39.1
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 2.4e-33 147.1 181 41.4
SEGI_10049 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 3.2e-33 146.7 169 40.2
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 5.6e-30 136.0 150 44.0
QL10p009356 Quercus lobata HOM05D002875 ORTHO05D003215 5.2e-28 129.4 196 37.8
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 9.8e-27 125.2 236 30.9
Lj5A126T83 Lonicera japonica HOM05D002875 ORTHO05D003215 6.4e-26 122.5 266 29.3
QL10p010149 Quercus lobata HOM05D002875 ORTHO05D003215 2.4e-25 120.6 190 35.8
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 5.4e-25 119.4 143 42.7
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 3.5e-24 116.7 340 28.2
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 7.8e-24 115.5 143 42.0
Atru.chr9.2509 Acer truncatum HOM05D002875 ORTHO05D003215 1.0e-23 115.2 205 36.1
Cpa.g.sc171.14 Carica papaya HOM05D002875 ORTHO05D003215 7.5e-19 99.0 176 32.4
SEGI_02753 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 3.1e-12 77.0 134 32.8
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 2.6e-11 73.9 126 38.9
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 9.9e-11 72.0 93 38.7
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 4.9e-10 69.7 101 36.6
Actinidia30873 Actinidia chinensis HOM05D002875 ORTHO05D003215 2.5e-06 57.4 110 30.9


User provided reference genes

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