Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.2e-278 962.6 493 100.0
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.0e-275 951.8 493 98.4
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 8.6e-165 584.3 479 59.9
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 1.6e-163 580.1 478 59.6
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 7.0e-151 538.1 454 58.8
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 1.6e-134 483.8 482 52.5
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 5.1e-133 478.8 475 51.2
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 2.5e-132 476.5 469 52.5
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 2.1e-131 473.4 470 52.1
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 4.0e-130 469.2 470 50.6
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 3.4e-129 466.1 470 51.1
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 7.6e-129 464.9 482 50.0
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 9.9e-129 464.5 483 50.5
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 2.9e-128 463.0 477 50.1
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 3.8e-128 462.6 476 50.2
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 4.2e-127 459.1 487 49.3
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 4.2e-127 459.1 467 50.7
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 9.2e-127 458.0 484 49.8
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 5.1e-125 452.2 470 49.1
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 5.1e-125 452.2 470 49.1
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.9e-124 450.3 474 50.6
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 2.5e-124 449.9 489 49.1
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 7.3e-124 448.4 476 48.9
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 2.9e-120 436.4 462 49.1
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 9.3e-119 431.4 546 44.9
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 2.8e-115 419.9 471 46.5
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 2.0e-113 413.7 476 47.1
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 9.9e-113 411.4 479 46.8
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 5.6e-108 395.6 445 47.2
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 4.0e-106 389.4 486 45.5
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 9.6e-100 368.2 370 50.0
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 3.1e-98 363.2 477 44.4
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 2.2e-96 357.1 470 43.2
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.4e-90 337.8 367 49.0
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 9.0e-90 335.1 507 38.7
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.2e-88 330.5 519 40.8
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.8e-82 310.8 368 44.0
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 5.1e-77 292.7 400 42.5
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.2e-75 287.3 308 49.7
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 5.3e-74 282.7 384 43.5
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 5.0e-72 276.2 242 59.9
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 1.0e-64 251.9 268 49.6
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 1.2e-38 165.2 182 45.6
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 3.4e-28 130.6 152 44.1
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 7.5e-28 129.4 158 39.9
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 4.3e-23 113.6 127 54.3
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 3.4e-20 104.0 95 50.5
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.4e-18 98.6 99 48.5
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-18 98.2 95 54.7
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.1e-15 89.0 71 56.3
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 3.1e-13 80.9 63 55.6
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 3.1e-13 80.9 79 49.4
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.7e-11 75.1 61 62.3
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 5.6e-07 60.1 276 25.7
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 1.3e-06 58.9 265 25.3
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 1.6e-06 58.5 55 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 2.1e-06 58.2 267 25.5
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 8.1e-06 56.2 335 24.2


User provided reference genes

Program Settings