Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 0.0e+00 1686.0 875 100.0
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 1.2e-185 654.4 920 42.2
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 1.0e-176 624.8 921 40.4
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 8.6e-176 621.7 922 39.2
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 4.3e-175 619.4 921 40.3
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 5.6e-175 619.0 948 39.2
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 2.8e-174 616.7 915 40.9
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 4.7e-174 615.9 918 40.1
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 8.0e-174 615.1 932 39.9
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 1.4e-173 614.4 883 41.3
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 5.2e-173 612.5 916 40.9
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 2.0e-172 610.5 920 38.8
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 1.1e-170 604.7 919 39.1
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 4.1e-170 602.8 928 39.3
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 9.2e-170 601.7 926 39.7
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 9.2e-170 601.7 918 38.3
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 2.7e-169 600.1 922 39.9
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.3e-168 597.8 921 39.0
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.7e-168 597.4 906 40.1
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.3e-168 597.0 920 39.5
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 2.3e-168 597.0 924 38.9
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 3.0e-168 596.7 926 39.0
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 1.1e-167 594.7 926 39.6
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 1.1e-167 594.7 926 38.6
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 1.9e-167 594.0 925 38.7
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 5.6e-167 592.4 927 38.3
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 7.3e-167 592.0 924 38.4
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.2e-166 591.3 918 39.2
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 1.2e-166 591.3 921 38.8
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 3.6e-166 589.7 931 39.2
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 1.1e-165 588.2 926 38.4
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 2.3e-165 587.0 932 38.9
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 2.3e-165 587.0 926 38.8
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 4.0e-165 586.3 916 39.4
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 2.0e-164 583.9 927 38.8
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 2.6e-164 583.6 922 38.6
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 5.8e-164 582.4 911 39.0
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 5.8e-164 582.4 911 39.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 1.3e-163 581.3 948 39.0
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 1.7e-163 580.9 914 39.5
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 2.2e-163 580.5 911 39.3
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 8.3e-163 578.6 916 38.9
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 2.4e-162 577.0 911 38.0
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 2.4e-162 577.0 903 38.4
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 4.1e-162 576.2 918 39.1
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 1.2e-161 574.7 918 39.2
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.2e-161 574.7 939 38.0
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 2.1e-161 573.9 920 38.5
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 4.6e-161 572.8 928 39.2
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 6.0e-161 572.4 933 37.8
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 7.8e-161 572.0 927 38.3
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.0e-160 571.6 928 37.6
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 1.0e-160 571.6 918 38.8
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 1.3e-160 571.2 923 37.7
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 3.9e-160 569.7 920 37.5
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 3.9e-160 569.7 926 39.6
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 5.1e-160 569.3 917 38.2
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 1.5e-159 567.8 934 37.2
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.9e-159 567.4 954 36.9
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 9.5e-159 565.1 925 37.5
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 1.2e-158 564.7 914 38.3
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 1.2e-158 564.7 922 37.5
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.2e-158 564.7 921 38.1
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 2.8e-158 563.5 914 38.3
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 8.1e-158 562.0 915 38.7
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 8.1e-158 562.0 910 37.5
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.8e-157 560.8 923 38.2
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 6.8e-157 558.9 921 37.6
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 8.9e-157 558.5 926 38.4
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 8.9e-157 558.5 925 37.7
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 1.5e-156 557.8 913 38.8
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 2.0e-156 557.4 934 37.2
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 2.6e-156 557.0 939 37.5
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 4.4e-156 556.2 928 38.1
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 5.8e-156 555.8 934 37.3
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 7.6e-156 555.4 911 39.0
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 1.4e-154 551.2 926 37.9
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.4e-154 550.4 915 37.9
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 5.4e-154 549.3 949 37.3
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 9.2e-154 548.5 783 40.7
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 6.0e-153 545.8 922 36.9
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 3.0e-152 543.5 919 37.3
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 4.3e-151 539.7 922 38.2
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 2.8e-150 537.0 922 38.3
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 3.6e-150 536.6 946 37.3
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 2.4e-149 533.9 1031 34.7
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 3.8e-147 526.6 907 35.7
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 3.2e-146 523.5 926 36.5
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 2.8e-142 510.4 761 41.1
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.6e-142 510.0 928 36.7
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 8.1e-142 508.8 921 37.2
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 2.7e-137 493.8 738 41.6
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 2.8e-134 483.8 737 39.1
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 3.9e-128 463.4 730 39.0
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 1.5e-127 461.5 891 35.8
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 3.3e-127 460.3 742 38.7
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 4.3e-127 459.9 743 38.9
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 1.4e-122 444.9 1070 30.4
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 7.6e-116 422.5 604 40.9
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 2.9e-115 420.6 601 41.8
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 1.0e-112 412.1 913 31.8
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 5.7e-111 406.4 541 43.8
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 3.4e-108 397.1 902 31.8
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.4e-106 391.7 606 38.8
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 7.0e-93 346.3 561 36.7
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 1.5e-90 338.6 565 38.4
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 1.2e-68 265.8 326 46.6
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-68 263.1 443 37.0
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 4.4e-63 247.3 771 28.9
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 6.4e-62 243.4 546 33.0
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.4e-61 242.3 394 36.0
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 2.4e-61 241.5 945 26.9
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 5.2e-40 170.6 249 41.4
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 1.3e-38 166.0 673 27.0
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 2.2e-38 165.2 268 37.7
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 3.2e-37 161.4 264 35.2
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 9.2e-37 159.8 196 45.4
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 8.6e-35 153.3 227 39.2
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 1.5e-31 142.5 219 40.2
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 1.0e-27 129.8 332 31.0
MBI19_g43231_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 1.7e-27 129.0 241 36.5
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 4.3e-26 124.4 195 35.9
Cfa023924 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.4e-24 119.4 800 21.0
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 2.8e-17 95.1 175 36.6
SGA_v2.0_scaffold45G17196 Striga asiatica HOM05D005365 ORTHO05D006910 5.3e-16 90.9 105 47.6
GSVIVG01030692001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.9e-14 85.1 124 42.7
HPP92_006139 Vanilla planifolia HOM05D005365 ORTHO05D006910 7.1e-13 80.5 171 31.6
Psat1g154520 Pisum sativum HOM05D005365 ORTHO05D006910 4.0e-08 64.7 84 46.4
Nn1g00453 Nelumbo nucifera HOM05D005365 ORTHO05D006910 1.0e-06 60.1 64 42.2


User provided reference genes

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