Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 8.1e-34 146.4 67 100.0
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.3e-15 85.9 62 56.5
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.2e-13 79.3 59 50.8
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.6e-13 79.0 59 50.8
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 2.7e-13 78.2 58 50.0
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 2.7e-13 78.2 59 52.5
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 4.6e-13 77.4 59 50.8
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 7.9e-13 76.6 60 45.0
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 7.9e-13 76.6 59 50.8
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 7.9e-13 76.6 59 49.2
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.3e-12 75.9 63 47.6
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.3e-12 75.9 63 47.6
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.3e-12 75.9 56 55.4
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.3e-12 75.9 59 49.2
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.3e-12 75.9 60 53.3
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.8e-12 75.5 63 47.6
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.8e-12 75.5 63 47.6
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.8e-12 75.5 60 51.7
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 2.3e-12 75.1 61 47.5
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 3.0e-12 74.7 59 47.5
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 3.0e-12 74.7 56 51.8
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 3.0e-12 74.7 56 51.8
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 3.9e-12 74.3 59 49.2
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 3.9e-12 74.3 59 47.5
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 3.9e-12 74.3 58 48.3
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 5.1e-12 73.9 59 45.8
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 5.1e-12 73.9 59 45.8
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 6.7e-12 73.6 59 45.8
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 6.7e-12 73.6 59 45.8
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 6.7e-12 73.6 59 45.8
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 6.7e-12 73.6 57 50.9
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 6.7e-12 73.6 59 49.2
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 8.7e-12 73.2 59 45.8
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 8.7e-12 73.2 63 49.2
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 8.7e-12 73.2 60 46.7
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.1e-11 72.8 56 55.4
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.1e-11 72.8 61 49.2
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 1.1e-11 72.8 60 51.7
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 1.5e-11 72.4 58 44.8
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.9e-11 72.0 60 50.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.9e-11 72.0 60 50.0
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 1.9e-11 72.0 57 49.1
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.5e-11 71.6 59 47.5
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 4.3e-11 70.9 55 50.9
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 4.3e-11 70.9 57 49.1
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 5.6e-11 70.5 54 51.9
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 9.6e-11 69.7 57 45.6
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 9.6e-11 69.7 56 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 2.1e-10 68.6 58 43.1
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.8e-10 68.2 62 48.4
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 4.8e-10 67.4 62 48.4
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 4.8e-10 67.4 67 40.3
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 6.2e-10 67.0 55 49.1
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 6.2e-10 67.0 57 49.1
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 4.0e-09 64.3 69 42.0
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.2e-08 62.8 57 47.4
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.6e-08 61.6 58 41.4
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 5.8e-08 60.5 57 45.6
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.3e-07 59.3 67 37.3
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 9.3e-06 53.1 60 40.0


User provided reference genes

Program Settings