Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.0e-204 714.9 352 100.0
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 2.7e-80 303.1 356 44.1
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 3.5e-80 302.8 346 44.8
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 5.1e-79 298.9 351 45.9
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 5.1e-79 298.9 356 43.8
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-78 297.4 353 45.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-78 297.4 353 45.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-78 296.2 350 43.1
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 3.3e-78 296.2 352 45.2
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-77 294.3 351 43.0
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.8e-77 293.1 350 45.4
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.7e-77 292.7 351 44.2
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 8.2e-77 291.6 352 45.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.1e-76 291.2 352 44.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.8e-76 290.4 354 46.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.8e-76 290.4 349 44.1
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-76 290.0 356 45.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-76 290.0 356 45.2
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 6.9e-76 288.5 377 44.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 9.0e-76 288.1 349 44.1
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.2e-75 287.7 349 43.6
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.2e-75 287.7 349 42.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.2e-75 287.7 352 42.9
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.0e-75 287.0 354 44.4
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.5e-75 285.8 352 42.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 4.5e-75 285.8 353 43.1
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.9e-75 285.4 349 44.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 5.9e-75 285.4 354 42.9
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 7.7e-75 285.0 376 42.8
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.7e-74 283.9 353 44.5
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.9e-74 283.1 352 44.6
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 8.5e-74 281.6 354 44.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.1e-73 281.2 351 44.7
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.4e-73 280.8 351 43.6
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.4e-73 280.8 358 44.1
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.9e-73 280.4 351 44.4
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.5e-73 280.0 358 43.6
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.2e-73 279.3 351 43.0
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 5.5e-73 278.9 351 43.6
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 7.2e-73 278.5 352 42.3
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 9.4e-73 278.1 354 41.8
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.2e-72 277.7 354 43.2
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-72 276.9 332 42.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.1e-72 275.4 358 44.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 7.9e-72 275.0 356 44.1
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 7.9e-72 275.0 356 43.5
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 7.9e-72 275.0 358 41.9
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.0e-71 274.6 352 42.0
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.4e-71 274.2 354 44.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.8e-71 273.9 354 42.7
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.3e-71 273.5 356 43.8
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 3.0e-71 273.1 354 41.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 5.1e-71 272.3 358 43.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 8.8e-71 271.6 352 42.3
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.1e-70 271.2 350 43.7
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 2.0e-70 270.4 355 43.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 2.0e-70 270.4 359 42.1
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.5e-70 270.0 355 42.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.3e-70 269.6 358 43.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.3e-70 269.6 353 40.8
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.3e-70 269.2 354 44.6
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 7.4e-70 268.5 360 41.9
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.3e-69 267.7 349 42.7
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.7e-69 267.3 355 40.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.2e-69 266.9 367 42.0
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.8e-69 266.5 354 41.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.8e-69 266.5 354 41.5
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 3.7e-69 266.2 371 41.8
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 6.3e-69 265.4 354 40.7
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.2e-69 265.0 349 39.8
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.1e-68 264.6 358 42.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.1e-68 264.6 352 42.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.1e-68 264.6 348 40.5
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.1e-68 262.7 353 41.6
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.0e-67 260.4 354 39.3
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.0e-67 260.4 370 41.1
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 3.4e-67 259.6 352 42.9
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.9e-67 258.8 355 40.6
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 7.7e-67 258.5 353 40.8
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 7.7e-67 258.5 352 42.6
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-66 258.1 349 39.3
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.3e-66 257.7 339 41.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.7e-66 257.3 355 41.7
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.1e-65 254.6 353 40.5
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 2.1e-64 250.4 353 38.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 3.6e-64 249.6 335 41.5
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 2.3e-63 246.9 333 43.8
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.0e-62 243.8 358 41.6
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.3e-61 241.1 334 42.8
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.3e-61 241.1 334 42.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 3.7e-61 239.6 334 42.5
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.8e-61 239.2 378 38.9
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 8.2e-61 238.4 354 39.3
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.2e-59 234.6 328 41.2
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.0e-59 233.8 339 39.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 5.0e-58 229.2 352 40.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 5.0e-58 229.2 356 39.0
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.1e-57 228.0 233 48.5
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.5e-57 227.6 235 47.7
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.2e-51 208.0 359 36.5
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 4.4e-46 189.5 298 39.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 2.8e-45 186.8 164 56.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.0e-42 178.3 165 52.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.5e-41 174.5 136 59.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 2.5e-41 173.7 306 37.3
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-38 164.5 231 38.1
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.0e-38 164.1 233 39.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.6e-35 154.5 142 52.8
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.1e-33 148.3 208 41.8
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 8.9e-31 138.7 207 37.2
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 7.5e-30 135.6 243 34.2
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.2e-27 128.3 206 35.4
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-27 127.9 207 34.8
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.7e-27 127.1 118 50.0
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-26 123.2 206 33.5
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-24 116.7 208 34.1
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.1e-17 95.1 237 25.7
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.3e-13 79.0 60 60.0
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-11 74.7 130 35.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-10 72.0 63 50.8
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.1e-08 62.4 45 64.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 5.8e-06 56.2 164 28.0


User provided reference genes

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