Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 9.3e-139 496.9 254 100.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 2.5e-19 100.1 194 32.5
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 5.6e-19 99.0 220 34.1
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 3.6e-18 96.3 198 31.8
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 3.1e-17 93.2 204 31.9
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 9.0e-17 91.7 201 30.8
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.2e-16 91.3 247 28.7
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.5e-16 90.9 224 30.8
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.0e-16 90.5 198 33.3
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 2.6e-16 90.1 201 33.3
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 4.5e-16 89.4 197 33.5
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 5.8e-16 89.0 245 30.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 7.6e-16 88.6 262 26.7
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 7.6e-16 88.6 204 29.4
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 9.9e-16 88.2 249 31.3
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.7e-15 87.4 198 31.3
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.7e-15 87.4 217 32.7
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.9e-15 86.7 198 30.8
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 2.9e-15 86.7 210 32.9
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 2.9e-15 86.7 202 31.2
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.8e-15 86.3 260 28.5
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.9e-15 85.9 260 28.1
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.9e-15 85.9 269 27.9
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 4.9e-15 85.9 210 30.5
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 6.4e-15 85.5 247 30.0
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 8.4e-15 85.1 210 30.5
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 1.1e-14 84.7 217 30.4
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.9e-14 84.0 203 31.5
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 2.4e-14 83.6 200 30.0
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 2.4e-14 83.6 201 28.4
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.2e-14 83.2 215 31.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.2e-14 83.2 204 30.9
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 3.2e-14 83.2 226 29.6
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.2e-14 82.8 202 30.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 4.2e-14 82.8 198 29.8
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 7.1e-14 82.0 198 31.3
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 7.1e-14 82.0 200 31.5
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 9.3e-14 81.6 201 31.8
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.2e-13 81.3 236 27.5
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.2e-13 81.3 204 31.4
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-13 81.3 202 29.7
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.6e-13 80.9 204 30.9
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.6e-13 80.9 236 29.7
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.6e-13 80.9 223 29.6
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.1e-13 80.5 196 31.1
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 2.1e-13 80.5 202 31.7
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 2.1e-13 80.5 201 31.8
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 2.7e-13 80.1 198 30.8
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 2.7e-13 80.1 200 29.0
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 2.7e-13 80.1 201 30.3
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 3.5e-13 79.7 245 27.8
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 3.5e-13 79.7 236 27.1
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 3.5e-13 79.7 202 31.7
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 3.5e-13 79.7 241 30.3
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 4.6e-13 79.3 243 26.7
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 4.6e-13 79.3 204 29.9
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 4.6e-13 79.3 197 33.0
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 6.0e-13 79.0 193 30.6
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 6.0e-13 79.0 199 28.1
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 7.9e-13 78.6 209 29.2
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 7.9e-13 78.6 194 32.0
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 7.9e-13 78.6 200 29.0
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.0e-12 78.2 276 26.4
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.0e-12 78.2 205 28.8
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 1.0e-12 78.2 196 30.1
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.3e-12 77.8 200 29.5
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 2.3e-12 77.0 162 29.0
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 2.3e-12 77.0 203 31.0
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.3e-12 77.0 206 29.1
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.0e-12 76.6 143 32.2
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 3.0e-12 76.6 198 29.3
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.0e-12 76.6 240 30.0
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 3.0e-12 76.6 261 27.2
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 3.9e-12 76.3 202 30.2
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 5.1e-12 75.9 198 29.8
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 6.7e-12 75.5 272 26.1
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 8.7e-12 75.1 222 25.7
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 8.7e-12 75.1 201 30.3
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 8.7e-12 75.1 249 28.1
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.5e-11 74.3 199 31.7
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.9e-11 73.9 198 29.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 3.3e-11 73.2 200 29.5
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 3.3e-11 73.2 199 30.2
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 4.3e-11 72.8 192 27.6
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.6e-11 72.4 199 29.6
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 5.6e-11 72.4 205 28.8
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.3e-10 71.2 176 29.5
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.3e-10 71.2 184 32.1
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.6e-10 70.9 203 30.5
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 2.1e-10 70.5 200 27.5
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 2.1e-10 70.5 199 29.6
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.1e-10 70.5 235 27.2
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 3.6e-10 69.7 197 30.5
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 3.6e-10 69.7 212 29.2
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 4.8e-10 69.3 196 28.6
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 4.8e-10 69.3 271 25.1
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 4.8e-10 69.3 236 25.4
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 8.1e-10 68.6 198 26.8
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.8e-09 67.4 198 26.8
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.8e-09 67.4 255 26.7
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 5.3e-09 65.9 206 26.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.5e-08 64.3 194 27.8
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.5e-08 64.3 165 30.9
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 3.4e-08 63.2 203 27.1
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 7.6e-08 62.0 225 26.7
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 7.6e-08 62.0 213 26.8
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 9.9e-08 61.6 234 24.8
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 9.9e-08 61.6 177 29.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 1.3e-07 61.2 161 28.6
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 1.1e-06 58.2 194 29.9


User provided reference genes

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