Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 1.3e-183 646.4 358 100.0
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.2e-70 271.2 179 79.9
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 5.8e-70 268.9 179 79.3
SMO343G0070 Selaginella moellendorffii HOM05D012767 ORTHO05D375838 2.0e-62 243.8 163 87.7
SMO367G0082 Selaginella moellendorffii HOM05D012767 ORTHO05D373751 7.3e-57 225.3 166 82.5
SMO367G0157 Selaginella moellendorffii HOM05D012767 ORTHO05D374658 8.1e-56 221.9 173 85.0
SMO367G1295 Selaginella moellendorffii HOM05D012767 ORTHO05D375871 8.1e-56 221.9 173 85.0
SMO134G0050 Selaginella moellendorffii HOM05D012767 ORTHO05D378333 3.8e-53 213.0 176 75.0
SMO134G0112 Selaginella moellendorffii HOM05D012767 ORTHO05D376135 1.1e-52 211.5 176 74.4
SMO134G0210 Selaginella moellendorffii HOM05D012767 ORTHO05D378056 1.1e-52 211.5 176 74.4
SMO274G0002 Selaginella moellendorffii HOM05D012767 ORTHO05D378880 1.9e-52 210.7 176 74.4
SMO134G0211 Selaginella moellendorffii HOM05D012767 ORTHO05D374118 4.6e-51 206.1 176 73.3
SMO367G1280 Selaginella moellendorffii HOM05D012767 ORTHO05D375231 6.0e-51 205.7 165 76.4
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 2.2e-45 187.2 185 52.4
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 6.7e-42 175.6 183 50.8
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 6.7e-42 175.6 183 50.8
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 7.4e-41 172.2 183 49.2
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 1.3e-40 171.4 183 50.3
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.3e-40 171.4 161 52.8
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 1.3e-40 171.4 194 47.4
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 1.3e-40 171.4 183 49.7
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 1.6e-40 171.0 183 49.7
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 1.6e-40 171.0 208 44.7
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.6e-40 171.0 179 49.7
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 3.7e-40 169.9 163 53.4
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 4.8e-40 169.5 183 50.3
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 4.8e-40 169.5 183 48.6
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 6.2e-40 169.1 160 52.5
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 8.1e-40 168.7 183 48.6
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 8.1e-40 168.7 184 49.5
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 8.1e-40 168.7 194 49.5
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 8.1e-40 168.7 187 48.7
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 1.1e-39 168.3 184 47.8
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 1.8e-39 167.5 163 50.3
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.8e-39 167.5 165 51.5
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 1.8e-39 167.5 185 47.6
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 2.4e-39 167.2 183 48.6
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 3.1e-39 166.8 183 49.7
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 3.1e-39 166.8 183 48.6
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 3.1e-39 166.8 163 51.5
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 4.0e-39 166.4 183 48.1
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 4.0e-39 166.4 183 48.6
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 5.3e-39 166.0 164 51.8
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 6.9e-39 165.6 163 52.1
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 6.9e-39 165.6 187 47.1
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 6.9e-39 165.6 187 47.1
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 6.9e-39 165.6 187 47.1
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 6.9e-39 165.6 187 47.1
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 6.9e-39 165.6 180 48.9
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 9.0e-39 165.2 180 47.8
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 9.0e-39 165.2 183 48.1
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 9.0e-39 165.2 183 48.1
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 9.0e-39 165.2 193 46.1
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 9.0e-39 165.2 183 47.5
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 1.2e-38 164.9 183 48.6
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.5e-38 164.5 161 50.3
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.5e-38 164.5 163 50.3
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 2.0e-38 164.1 185 47.6
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 2.6e-38 163.7 183 47.0
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 2.6e-38 163.7 183 47.0
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 2.6e-38 163.7 163 49.7
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 3.4e-38 163.3 209 45.0
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 3.4e-38 163.3 183 46.4
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 3.4e-38 163.3 202 44.1
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 4.5e-38 162.9 183 48.1
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 9.9e-38 161.8 187 46.5
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 9.9e-38 161.8 160 52.5
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 9.9e-38 161.8 156 52.6
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 9.9e-38 161.8 163 50.9
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.3e-37 161.4 211 43.6
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 1.7e-37 161.0 182 47.8
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 1.7e-37 161.0 163 50.9
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 1.7e-37 161.0 160 51.2
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 1.7e-37 161.0 196 46.9
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 2.2e-37 160.6 181 48.1
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 2.9e-37 160.2 212 42.0
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 2.9e-37 160.2 182 46.7
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 2.9e-37 160.2 163 49.7
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 3.8e-37 159.8 184 46.7
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 3.8e-37 159.8 161 50.3
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 4.9e-37 159.5 160 51.2
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 4.9e-37 159.5 160 51.2
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 6.4e-37 159.1 183 47.5
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 8.4e-37 158.7 183 46.4
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 1.1e-36 158.3 179 48.0
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 1.4e-36 157.9 180 47.8
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 3.2e-36 156.8 180 46.7
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 3.2e-36 156.8 183 45.4
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 3.2e-36 156.8 160 50.0
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 4.2e-36 156.4 207 41.5
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 4.2e-36 156.4 161 50.9
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 5.5e-36 156.0 175 46.9
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 5.5e-36 156.0 164 50.6
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 7.1e-36 155.6 183 46.4
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.2e-35 154.8 161 46.0
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 1.2e-35 154.8 180 45.0
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 2.1e-35 154.1 179 46.4
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 4.6e-35 152.9 205 42.4
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 1.0e-34 151.8 180 46.1
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 1.0e-34 151.8 180 47.8
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 5.1e-34 149.4 137 56.9
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 1.9e-33 147.5 180 43.3
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 2.1e-32 144.1 121 57.0
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 2.8e-32 143.7 125 58.4
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 3.7e-32 143.3 135 53.3
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 1.4e-31 141.4 148 50.7
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 3.1e-31 140.2 122 56.6
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 2.6e-30 137.1 160 45.6
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 1.0e-29 135.2 141 49.6
SMO343G0035 Selaginella moellendorffii HOM05D012767 ORTHO05D378341 1.6e-27 127.9 92 83.7
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 3.3e-25 120.2 144 44.4
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 8.2e-24 115.5 211 35.5
SMO367G0851 Selaginella moellendorffii HOM05D012767 ORTHO05D378282 3.8e-21 106.7 102 66.7
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 4.3e-17 93.2 129 41.1
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 5.7e-17 92.8 84 53.6
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 3.7e-16 90.1 166 34.3
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 1.5e-14 84.7 100 45.0
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 4.5e-14 83.2 100 44.0
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 5.0e-13 79.7 98 44.9
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 3.2e-12 77.0 74 51.4
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 4.7e-11 73.2 172 30.8
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 3.0e-10 70.5 256 28.1
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 8.8e-10 68.9 69 47.8
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 9.7e-09 65.5 69 46.4


User provided reference genes

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