Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 4.9e-105 384.4 187 100.0
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 6.7e-62 241.1 162 71.6
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 3.3e-61 238.8 162 69.1
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.7e-60 236.5 162 67.9
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.7e-60 236.5 165 67.3
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 1.7e-60 236.5 165 67.9
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 2.2e-60 236.1 163 66.3
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 3.7e-60 235.3 162 67.3
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.2e-60 234.2 162 66.7
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.4e-59 232.6 162 67.3
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 2.4e-59 232.6 163 68.7
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.1e-59 232.3 162 66.0
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 3.1e-59 232.3 162 66.7
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 5.3e-59 231.5 162 63.6
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 7.0e-59 231.1 165 64.8
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 7.0e-59 231.1 187 58.3
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 9.1e-59 230.7 162 65.4
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 1.2e-58 230.3 162 64.8
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.2e-58 230.3 162 66.0
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 1.6e-58 229.9 162 67.3
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 1.6e-58 229.9 162 64.8
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 2.0e-58 229.6 162 64.8
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 2.0e-58 229.6 162 64.8
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 4.5e-58 228.4 162 64.2
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 4.5e-58 228.4 165 64.8
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 4.5e-58 228.4 162 64.2
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 5.9e-58 228.0 162 64.8
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 66.0
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 64.2
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 63.6
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 64.8
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 66.0
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 62.3
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 7.7e-58 227.6 162 64.8
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 1.0e-57 227.3 162 64.8
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.0e-57 227.3 162 64.8
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.3e-57 226.9 162 64.2
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.3e-57 226.9 162 66.0
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.3e-57 226.9 162 64.8
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.7e-57 226.5 162 63.6
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 1.7e-57 226.5 162 65.4
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 1.7e-57 226.5 162 65.4
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 1.7e-57 226.5 162 64.8
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.2e-57 226.1 162 64.8
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.9e-57 225.7 162 63.0
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.8e-57 225.3 162 65.4
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.0e-57 224.9 162 64.2
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 5.0e-57 224.9 162 64.8
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 5.0e-57 224.9 162 61.7
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 6.5e-57 224.6 162 63.6
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 6.5e-57 224.6 157 65.0
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 6.5e-57 224.6 162 62.3
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 8.5e-57 224.2 162 63.0
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 8.5e-57 224.2 162 63.0
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 8.5e-57 224.2 162 61.7
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 8.5e-57 224.2 157 65.0
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.1e-56 223.8 162 64.8
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 1.5e-56 223.4 162 65.4
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.5e-56 223.4 172 58.1
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 2.5e-56 222.6 162 63.6
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.2e-56 222.2 162 62.3
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.2e-56 222.2 162 63.6
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 3.2e-56 222.2 162 61.1
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 3.2e-56 222.2 162 64.8
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 4.2e-56 221.9 166 62.7
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 4.2e-56 221.9 162 64.8
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 4.2e-56 221.9 162 64.8
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 5.5e-56 221.5 162 63.6
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 7.2e-56 221.1 162 63.6
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 7.2e-56 221.1 162 61.7
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 9.4e-56 220.7 165 61.8
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 9.4e-56 220.7 162 63.0
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 9.4e-56 220.7 162 61.1
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.2e-55 220.3 159 64.8
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.2e-55 220.3 162 61.7
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.6e-55 219.9 157 63.1
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 1.6e-55 219.9 162 62.3
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 3.6e-55 218.8 187 56.1
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.6e-55 218.8 162 62.3
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 6.1e-55 218.0 162 63.0
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 1.0e-54 217.2 162 61.7
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 1.4e-54 216.9 157 63.1
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 1.4e-54 216.9 157 63.1
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.4e-54 216.9 162 63.6
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 3.0e-54 215.7 165 61.8
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 3.0e-54 215.7 155 65.2
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 3.0e-54 215.7 162 61.7
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 5.2e-54 214.9 165 61.2
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 5.2e-54 214.9 162 63.0
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 6.8e-54 214.5 165 60.6
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 6.8e-54 214.5 165 60.0
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 6.8e-54 214.5 162 61.1
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 8.8e-54 214.2 165 61.2
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 1.2e-53 213.8 165 60.6
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 1.2e-53 213.8 165 60.6
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 1.2e-53 213.8 162 61.7
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 1.5e-53 213.4 155 63.9
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 2.0e-53 213.0 162 59.9
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 2.6e-53 212.6 165 60.6
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 5.7e-53 211.5 162 62.3
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 9.8e-53 210.7 165 60.0
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 2.8e-52 209.1 165 60.0
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 6.3e-52 208.0 180 58.3
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 6.3e-52 208.0 171 59.1
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.1e-51 207.2 162 60.5
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 4.1e-51 205.3 165 57.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.7e-50 202.6 165 56.4
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 3.8e-49 198.7 162 56.2
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 4.7e-47 191.8 229 46.3
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.4e-46 190.3 162 56.8
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 8.3e-44 181.0 137 62.8
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.4e-43 180.3 164 54.9
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.5e-42 175.6 133 60.9
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.9e-41 172.6 140 58.6
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 3.8e-41 172.2 122 64.8
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 5.0e-41 171.8 122 62.3
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.6e-41 171.0 165 51.5
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.9e-40 169.9 146 54.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 4.3e-40 168.7 133 59.4
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 8.0e-39 164.5 146 55.5
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.7e-36 155.6 134 53.7
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 2.4e-35 152.9 129 55.8
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 3.2e-35 152.5 185 45.9
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 5.4e-35 151.8 132 53.8
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 9.2e-35 151.0 193 42.0
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.0e-33 147.5 162 50.0
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.3e-33 147.1 120 56.7
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.3e-33 146.4 129 54.3
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.3e-33 146.4 165 44.8
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 8.0e-31 137.9 114 56.1
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 4.3e-24 115.5 82 63.4
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.8e-22 110.2 80 61.2
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 7.5e-21 104.8 80 60.0
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 6.4e-20 101.7 78 61.5
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 9.2e-19 97.8 100 46.0
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.4e-06 57.4 33 69.7


User provided reference genes

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