Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 0.0e+00 1175.2 641 100.0
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.9e-148 530.4 677 45.2
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.5e-134 483.0 699 43.1
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 2.2e-128 463.8 656 41.5
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-126 458.0 642 42.2
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-126 458.0 642 42.2
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 6.0e-126 455.7 645 41.9
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 1.3e-125 454.5 652 40.8
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.3e-125 454.5 693 40.8
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.7e-125 454.1 650 41.4
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.1e-124 451.4 672 39.9
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 2.5e-124 450.3 651 40.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 3.3e-124 449.9 651 41.0
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.3e-124 449.9 650 40.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 3.3e-124 449.9 669 40.2
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 4.3e-124 449.5 650 40.6
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 5.6e-124 449.1 642 40.7
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 9.5e-124 448.4 641 41.8
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-123 448.0 653 40.4
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.6e-123 447.6 648 41.5
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 2.8e-123 446.8 680 39.7
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.6e-123 446.4 653 40.6
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 6.2e-123 445.7 668 40.3
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 6.2e-123 445.7 673 40.6
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 1.4e-122 444.5 657 41.2
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.0e-122 443.0 651 40.7
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 5.2e-122 442.6 647 41.3
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 5.2e-122 442.6 648 39.7
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.8e-122 442.2 653 40.0
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 8.9e-122 441.8 643 41.5
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 8.9e-122 441.8 673 40.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.5e-121 441.0 643 41.2
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 2.0e-121 440.7 673 40.6
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.4e-121 439.9 645 40.3
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 5.8e-121 439.1 656 41.2
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 7.5e-121 438.7 673 40.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 7.5e-121 438.7 658 39.5
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.2e-120 437.2 665 40.8
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 1.4e-119 434.5 646 40.2
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.4e-119 434.5 655 40.5
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 4.1e-119 433.0 651 39.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.4e-119 432.6 641 40.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 5.4e-119 432.6 650 40.3
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 7.1e-119 432.2 649 39.0
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 9.2e-119 431.8 669 40.7
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 9.2e-119 431.8 671 39.0
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.6e-118 431.0 641 40.1
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 2.7e-118 430.3 654 40.4
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 6.0e-118 429.1 655 40.3
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.0e-117 428.3 663 38.3
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 2.3e-117 427.2 658 40.6
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 2.3e-117 427.2 649 40.1
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.9e-117 426.4 650 38.8
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.1e-116 424.9 640 40.3
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.5e-116 424.5 651 39.0
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.9e-116 424.1 674 39.3
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 3.3e-116 423.3 658 40.4
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.3e-116 423.3 684 38.9
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 7.3e-116 422.2 657 40.0
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 7.3e-116 422.2 679 38.3
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 9.5e-116 421.8 649 38.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.6e-115 419.9 682 38.4
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 4.7e-115 419.5 644 39.1
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 6.2e-115 419.1 620 40.3
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-114 418.3 651 39.6
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 2.4e-114 417.2 655 39.7
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.2e-113 414.8 662 38.8
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.2e-113 414.8 675 38.5
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.5e-113 414.5 672 39.1
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.0e-113 414.1 662 38.7
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 5.8e-113 412.5 646 40.2
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 9.9e-113 411.8 642 39.7
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.3e-112 411.4 645 38.9
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 3.8e-112 409.8 655 38.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 8.4e-112 408.7 671 39.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.4e-111 407.9 642 39.7
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.9e-111 407.5 641 38.7
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.4e-111 407.1 656 38.3
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 6.0e-110 402.5 644 38.5
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 6.0e-110 402.5 655 38.0
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.0e-109 401.7 627 39.7
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.5e-108 397.9 633 39.3
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.3e-108 396.4 616 39.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 5.6e-108 396.0 645 38.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.6e-108 396.0 645 40.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 7.3e-108 395.6 672 36.6
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 2.1e-107 394.0 668 35.9
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.1e-107 394.0 654 39.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.8e-106 391.0 647 38.9
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 4.0e-106 389.8 608 39.6
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.2e-105 388.3 677 35.9
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.8e-104 383.3 628 38.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.4e-103 381.3 672 35.9
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.9e-103 380.9 672 35.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 2.4e-103 380.6 671 35.3
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.2e-103 380.2 672 35.7
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 9.3e-103 378.6 679 36.5
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 9.3e-103 378.6 581 39.4
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 1.2e-102 378.3 673 35.8
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 4.6e-102 376.3 672 35.3
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 6.2e-99 365.9 629 38.2
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.1e-98 365.2 655 37.1
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 4.5e-89 333.2 625 34.7
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.0e-88 332.0 479 39.2
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.8e-85 321.2 605 36.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 4.1e-74 283.5 562 31.9
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 7.9e-62 242.7 358 39.7
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 2.6e-60 237.7 342 37.7
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.8e-58 231.5 309 42.1
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.8e-58 231.5 331 41.4
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.2e-56 224.6 317 40.1
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 8.0e-54 216.1 475 33.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 4.8e-43 180.3 243 43.6
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 6.5e-40 169.9 222 42.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 4.1e-34 150.6 238 37.8
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 4.0e-29 134.0 119 49.6
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 4.0e-29 134.0 119 49.6
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.1e-18 97.4 177 32.8
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 5.0e-16 90.5 387 26.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.4e-13 82.4 76 48.7
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.5e-07 61.6 90 40.0


User provided reference genes

Program Settings