Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.0e-73 280.0 148 100.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 8.9e-41 170.6 140 65.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 9.2e-38 160.6 145 62.1
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 8.6e-36 154.1 134 61.9
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 3.6e-34 148.7 129 59.7
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 8.0e-34 147.5 137 59.9
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 5.2e-33 144.8 129 58.1
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 5.2e-33 144.8 145 55.9
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 5.2e-33 144.8 138 55.8
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.2e-32 143.7 134 56.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.2e-32 143.7 140 55.7
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.2e-32 143.7 142 53.5
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.2e-32 143.7 134 59.7
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.5e-32 143.3 135 55.6
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.0e-32 142.9 129 56.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.4e-32 142.1 137 56.9
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 4.4e-32 141.7 147 53.7
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 5.8e-32 141.4 128 57.8
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 5.8e-32 141.4 128 57.8
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 5.8e-32 141.4 128 57.8
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 5.8e-32 141.4 128 57.8
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 5.8e-32 141.4 135 54.8
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 5.8e-32 141.4 128 57.8
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 7.5e-32 141.0 134 58.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 9.8e-32 140.6 138 55.8
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 9.8e-32 140.6 127 59.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.3e-31 140.2 150 53.3
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.3e-31 140.2 140 55.0
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.3e-31 140.2 145 53.8
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.3e-31 140.2 135 54.1
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.3e-31 140.2 134 55.2
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.7e-31 139.8 145 53.1
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 1.7e-31 139.8 138 54.3
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.2e-31 139.4 136 55.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 2.2e-31 139.4 146 54.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.2e-31 139.4 146 54.1
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 2.2e-31 139.4 146 54.1
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.2e-31 139.4 137 54.7
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 2.9e-31 139.0 140 53.6
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 2.9e-31 139.0 140 53.6
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 2.9e-31 139.0 135 56.3
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 2.9e-31 139.0 142 51.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.7e-31 138.7 104 69.2
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 3.7e-31 138.7 138 56.5
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 3.7e-31 138.7 141 54.6
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 4.9e-31 138.3 104 65.4
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.9e-31 138.3 144 52.8
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.9e-31 138.3 134 55.2
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.3e-31 137.5 131 54.2
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 8.3e-31 137.5 111 63.1
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 8.3e-31 137.5 134 54.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 8.3e-31 137.5 136 56.6
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.1e-30 137.1 133 54.9
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.1e-30 137.1 140 54.3
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.1e-30 137.1 125 58.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.4e-30 136.7 136 54.4
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.4e-30 136.7 134 56.0
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.4e-30 136.7 121 57.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.4e-30 136.7 133 56.4
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.4e-30 136.7 134 54.5
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 2.4e-30 136.0 144 54.9
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.4e-30 136.0 131 56.5
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.4e-30 136.0 133 55.6
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 2.4e-30 136.0 137 53.3
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.2e-30 135.6 137 51.8
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 4.1e-30 135.2 135 55.6
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.1e-30 135.2 127 55.1
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 4.1e-30 135.2 120 60.8
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 4.1e-30 135.2 141 54.6
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.1e-30 135.2 134 53.0
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 5.4e-30 134.8 110 62.7
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.4e-30 134.8 127 55.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.4e-30 134.8 137 54.7
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 7.0e-30 134.4 134 54.5
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 7.0e-30 134.4 144 54.2
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 7.0e-30 134.4 118 59.3
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.0e-30 134.4 162 48.8
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 9.2e-30 134.0 134 53.7
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 9.2e-30 134.0 139 55.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 9.2e-30 134.0 139 55.4
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 9.2e-30 134.0 135 52.6
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.2e-29 133.7 139 54.7
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.2e-29 133.7 139 54.7
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.2e-29 133.7 137 51.8
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.2e-29 133.7 135 53.3
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.6e-29 133.3 136 50.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.6e-29 133.3 113 61.9
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.6e-29 133.3 134 52.2
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-29 132.9 139 55.4
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-29 132.9 139 55.4
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 2.0e-29 132.9 121 57.9
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.7e-29 132.5 121 56.2
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.5e-29 132.1 111 62.2
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.5e-29 132.1 111 62.2
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.5e-29 132.1 140 53.6
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.5e-29 132.1 136 52.2
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.6e-29 131.7 126 55.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 4.6e-29 131.7 131 55.0
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.0e-29 131.3 113 60.2
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 7.8e-29 131.0 104 61.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.0e-28 130.6 136 54.4
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.0e-28 130.6 131 53.4
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.3e-28 130.2 134 51.5
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.3e-28 130.2 134 51.5
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.3e-28 130.2 103 63.1
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.7e-28 129.8 134 53.7
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.7e-28 129.8 110 60.0
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.7e-28 129.8 118 57.6
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.7e-28 129.8 142 50.7
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.3e-28 129.4 103 62.1
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.3e-28 129.4 136 54.4
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 5.0e-28 128.3 135 52.6
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 6.6e-28 127.9 134 51.5
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 6.6e-28 127.9 134 51.5
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 6.6e-28 127.9 134 51.5
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.6e-28 127.9 104 61.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.5e-27 126.7 111 56.8
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.5e-27 126.7 129 50.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.7e-26 121.7 125 50.4
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.0e-24 116.3 142 45.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 2.0e-24 116.3 85 68.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.9e-22 109.8 127 47.2
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.0e-20 104.0 139 41.7
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.9e-15 85.9 102 45.1
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.1e-14 84.0 85 45.9
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.8e-10 69.3 89 44.9
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 4.0e-09 65.5 87 44.8
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 4.4e-08 62.0 50 54.0


User provided reference genes

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