Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 2.0e-217 758.8 397 100.0
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 3.0e-43 180.3 309 46.3
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 1.4e-29 134.8 198 46.0
SMO364G0374 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 1.4e-24 118.2 67 89.6
SMO364G0213 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 6.9e-24 115.9 67 89.6
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.3e-11 74.3 182 32.4
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 2.8e-09 67.4 210 29.5
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 3.7e-09 67.0 206 29.6
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 3.7e-09 67.0 213 28.6
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 3.7e-09 67.0 212 29.2
SMO239G0102 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 4.8e-09 66.6 54 59.3
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 8.2e-09 65.9 212 29.2
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 8.2e-09 65.9 200 31.0
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.1e-08 65.5 160 33.8
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.1e-08 65.5 207 28.5
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.1e-08 65.5 205 28.3
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.4e-08 65.1 213 28.6
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 1.4e-08 65.1 214 27.6
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 1.4e-08 65.1 209 28.2
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 1.8e-08 64.7 214 27.1
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 2.4e-08 64.3 210 27.1
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 2.4e-08 64.3 210 27.1
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.4e-08 64.3 207 29.5
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 3.1e-08 63.9 37 73.0
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 3.1e-08 63.9 213 28.2
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 3.1e-08 63.9 213 25.8
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 3.1e-08 63.9 214 27.1
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 4.1e-08 63.5 213 28.2
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 4.1e-08 63.5 213 28.6
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 4.1e-08 63.5 207 29.0
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 5.3e-08 63.2 214 28.5
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 5.3e-08 63.2 216 27.8
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 5.3e-08 63.2 202 29.2
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 5.3e-08 63.2 207 28.5
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 5.3e-08 63.2 199 29.6
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 7.0e-08 62.8 206 26.7
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 7.0e-08 62.8 214 29.4
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 7.0e-08 62.8 219 26.5
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 7.0e-08 62.8 213 27.7
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 9.1e-08 62.4 44 68.2
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 9.1e-08 62.4 44 65.9
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 9.1e-08 62.4 204 29.9
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 1.2e-07 62.0 212 27.4
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 1.2e-07 62.0 206 28.2
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 1.2e-07 62.0 213 29.1
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 1.2e-07 62.0 37 75.7
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 1.2e-07 62.0 37 75.7
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 1.6e-07 61.6 210 27.1
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 1.6e-07 61.6 210 27.1
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 1.6e-07 61.6 210 27.1
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 1.6e-07 61.6 213 26.8
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.6e-07 61.6 219 26.5
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 1.6e-07 61.6 207 28.0
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 1.6e-07 61.6 37 75.7
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 2.0e-07 61.2 210 27.1
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 2.0e-07 61.2 204 27.5
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 2.0e-07 61.2 44 65.9
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.0e-07 61.2 204 26.5
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 2.6e-07 60.8 214 28.0
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 2.6e-07 60.8 214 27.6
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 3.5e-07 60.5 49 61.2
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 3.5e-07 60.5 206 30.1
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 3.5e-07 60.5 44 63.6
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 3.5e-07 60.5 44 63.6
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 3.5e-07 60.5 37 73.0
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 4.5e-07 60.1 37 73.0
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 4.5e-07 60.1 210 27.1
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 4.5e-07 60.1 214 26.6
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 4.5e-07 60.1 44 63.6
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 4.5e-07 60.1 207 29.0
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 4.5e-07 60.1 205 27.8
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 4.5e-07 60.1 209 28.2
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 4.5e-07 60.1 213 27.2
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 5.9e-07 59.7 206 27.7
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 5.9e-07 59.7 37 73.0
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.9e-07 59.7 210 26.2
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 5.9e-07 59.7 209 26.3
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 7.7e-07 59.3 37 70.3
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 7.7e-07 59.3 203 28.6
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.7e-07 59.3 216 25.9
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 7.7e-07 59.3 44 63.6
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.0e-06 58.9 213 26.3
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.0e-06 58.9 206 26.7
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.0e-06 58.9 213 26.8
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.0e-06 58.9 37 70.3
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.3e-06 58.5 44 61.4
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 1.3e-06 58.5 197 27.9
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 1.7e-06 58.2 41 68.3
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.7e-06 58.2 37 70.3
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.7e-06 58.2 204 27.0
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.7e-06 58.2 217 26.3
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.7e-06 58.2 213 25.8
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 1.7e-06 58.2 37 70.3
SMO296G0026 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 1.7e-06 58.2 60 46.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.2e-06 57.8 44 61.4
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 2.2e-06 57.8 37 70.3
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 2.2e-06 57.8 37 67.6
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.2e-06 57.8 213 27.2
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 2.2e-06 57.8 205 26.3
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 2.9e-06 57.4 37 67.6
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 2.9e-06 57.4 37 67.6
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 2.9e-06 57.4 42 61.9
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 3.8e-06 57.0 37 67.6
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 3.8e-06 57.0 206 27.7
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.8e-06 57.0 213 25.8
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 3.8e-06 57.0 210 26.7
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 3.8e-06 57.0 212 26.4
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 5.0e-06 56.6 44 61.4
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 5.0e-06 56.6 204 27.0
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 5.0e-06 56.6 155 31.6
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 6.5e-06 56.2 42 61.9
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 6.5e-06 56.2 37 64.9
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 6.5e-06 56.2 37 64.9
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 8.5e-06 55.8 39 61.5
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 8.5e-06 55.8 37 67.6
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 8.5e-06 55.8 37 70.3


User provided reference genes

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