Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0797 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.9e-165 584.7 291 100.0
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.0e-48 198.0 331 43.5
SMO164G0067 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 9.0e-13 78.6 69 65.2
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 4.6e-09 66.2 137 36.5
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 7.9e-09 65.5 75 50.7
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 1.3e-08 64.7 142 35.2
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.8e-08 64.3 142 34.5
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.8e-08 64.3 63 54.0
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.8e-08 64.3 63 54.0
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 3.0e-08 63.5 81 43.2
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 3.9e-08 63.2 99 38.4
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 3.9e-08 63.2 74 48.6
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 5.1e-08 62.8 133 35.3
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 6.7e-08 62.4 109 38.5
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 6.7e-08 62.4 88 43.2
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 8.7e-08 62.0 142 34.5
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 1.1e-07 61.6 142 33.8
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 1.1e-07 61.6 142 33.8
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.5e-07 61.2 143 35.7
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 1.9e-07 60.8 101 37.6
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.9e-07 60.8 96 37.5
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 1.9e-07 60.8 142 33.8
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 1.9e-07 60.8 110 37.3
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 2.5e-07 60.5 133 33.8
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 3.3e-07 60.1 142 33.1
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 3.3e-07 60.1 116 37.1
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 3.3e-07 60.1 116 37.1
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 3.3e-07 60.1 105 39.0
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 3.3e-07 60.1 154 33.8
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 3.3e-07 60.1 149 33.6
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 3.3e-07 60.1 145 34.5
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 4.3e-07 59.7 84 45.2
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.3e-07 59.7 116 37.1
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 4.3e-07 59.7 94 39.4
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 4.3e-07 59.7 103 37.9
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 4.3e-07 59.7 98 35.7
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 5.7e-07 59.3 109 37.6
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 5.7e-07 59.3 111 34.2
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 5.7e-07 59.3 95 45.3
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 7.4e-07 58.9 99 40.4
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 7.4e-07 58.9 77 48.1
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 7.4e-07 58.9 110 40.0
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 7.4e-07 58.9 104 40.4
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 9.6e-07 58.5 145 33.8
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 9.6e-07 58.5 116 37.1
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 9.6e-07 58.5 77 48.1
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 9.6e-07 58.5 77 48.1
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.3e-06 58.2 157 29.9
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 1.3e-06 58.2 157 31.2
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 1.6e-06 57.8 141 32.6
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 1.6e-06 57.8 102 40.2
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.6e-06 57.8 146 34.9
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 1.6e-06 57.8 94 38.3
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 1.6e-06 57.8 143 35.7
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.1e-06 57.4 165 29.7
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 2.1e-06 57.4 168 29.2
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 2.1e-06 57.4 67 46.3
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.1e-06 57.4 67 49.3
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 2.8e-06 57.0 82 43.9
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.8e-06 57.0 102 39.2
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 2.8e-06 57.0 93 37.6
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 2.8e-06 57.0 104 35.6
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 3.7e-06 56.6 161 32.3
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 3.7e-06 56.6 108 36.1
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 4.8e-06 56.2 87 41.4
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 4.8e-06 56.2 109 36.7
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 4.8e-06 56.2 116 36.2
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 4.8e-06 56.2 105 41.9
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 6.2e-06 55.8 112 35.7
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 8.2e-06 55.5 122 35.2
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 8.2e-06 55.5 102 38.2
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 8.2e-06 55.5 108 36.1
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 8.2e-06 55.5 147 31.3


User provided reference genes

Program Settings