Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0780 Selaginella moellendorffii HOM05D007403 ORTHO05D009306 3.2e-292 1007.7 511 100.0
SMO353G0333 Selaginella moellendorffii HOM05D007403 ORTHO05D009306 1.5e-241 839.3 494 88.7
Pp3c9_24800 Physcomitrium patens HOM05D007403 ORTHO05D009306 5.5e-66 256.1 448 37.9
GSVIVG01023003001 Vitis vinifera HOM05D007403 ORTHO05D009306 1.0e-64 251.9 392 41.3
CSS0040815 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 3.4e-63 246.9 414 38.2
Nn5g28844 Nelumbo nucifera HOM05D007403 ORTHO05D009306 3.4e-63 246.9 411 38.2
Prupe.1G562100 Prunus persica HOM05D007403 ORTHO05D009306 7.5e-63 245.7 415 38.3
Dinv19355 Davidia involucrata HOM05D007403 ORTHO05D009306 9.8e-63 245.4 414 38.9
CSS0033747 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 2.2e-62 244.2 414 37.9
Aqoxy5G02020 Aquilegia oxysepala HOM05D007403 ORTHO05D009306 2.8e-62 243.8 409 37.9
MBI04_g33335_MAGBIO Magnolia biondii HOM05D007403 ORTHO05D009306 3.7e-62 243.4 435 37.0
Migut.B00669 Erythranthe guttata HOM05D007403 ORTHO05D009306 8.3e-62 242.3 411 37.2
TAR381G0205 Trochodendron aralioides HOM05D007403 ORTHO05D009306 8.3e-62 242.3 412 38.3
ATR1120G172 Amborella trichopoda HOM05D007403 ORTHO05D009306 1.1e-61 241.9 414 37.2
Sopen01g046850 Solanum pennellii HOM05D007403 ORTHO05D009306 1.1e-61 241.9 414 39.4
QL02p098561 Quercus lobata HOM05D007403 ORTHO05D009306 1.8e-61 241.1 391 37.9
TWI59G1473 Tripterygium wilfordii HOM05D007403 ORTHO05D009306 1.8e-61 241.1 420 37.1
Gohir.D12G039900 Gossypium hirsutum HOM05D007403 ORTHO05D009306 5.4e-61 239.6 409 39.4
Gorai.008G041600 Gossypium raimondii HOM05D007403 ORTHO05D009306 5.4e-61 239.6 409 39.4
Cc02_g22320 Coffea canephora HOM05D007403 ORTHO05D009306 1.2e-60 238.4 410 37.6
Carub.0006s2260 Capsella rubella HOM05D007403 ORTHO05D009306 1.6e-60 238.0 414 35.7
Potri.003G021100 Populus trichocarpa HOM05D007403 ORTHO05D009306 1.6e-60 238.0 412 37.1
Duzib132G0321 Durio zibethinus HOM05D007403 ORTHO05D009306 2.0e-60 237.7 409 38.1
AagrBONN_evm.TU.Sc2ySwM_344.1532 Anthoceros agrestis HOM05D007403 ORTHO05D009306 3.5e-60 236.9 441 36.1
MD08G1224800 Malus domestica HOM05D007403 ORTHO05D009306 4.5e-60 236.5 412 37.4
Eucgr.G00612 Eucalyptus grandis HOM05D007403 ORTHO05D009306 5.9e-60 236.1 399 38.3
Thhalv10004004m.g Eutrema salsugineum HOM05D007403 ORTHO05D009306 8.6e-59 232.3 411 36.0
Thecc.02G040500 Theobroma cacao HOM05D007403 ORTHO05D009306 8.6e-59 232.3 409 37.7
COL.COLO4_17887 Corchorus olitorius HOM05D007403 ORTHO05D009306 1.5e-58 231.5 392 39.3
Atru.chr6.1105 Acer truncatum HOM05D007403 ORTHO05D009306 2.5e-58 230.7 415 37.1
CARHR188740 Cardamine hirsuta HOM05D007403 ORTHO05D009306 3.3e-58 230.3 411 35.0
BraA02t08979Z Brassica rapa HOM05D007403 ORTHO05D009306 4.2e-58 229.9 408 35.5
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 1.6e-57 228.0 405 34.8
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 3.6e-57 226.9 403 35.2
EL10Ac2g02449 Beta vulgaris HOM05D007403 ORTHO05D009306 4.7e-57 226.5 396 36.6
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 4.7e-57 226.5 406 34.7
Medtr2g043740 Medicago truncatula HOM05D007403 ORTHO05D009306 6.1e-57 226.1 401 36.7
Nitab4.5_0006604g0010 Nicotiana tabacum HOM05D007403 ORTHO05D009306 6.1e-57 226.1 331 42.3
SEGI_20290 Sequoiadendron giganteum HOM05D007403 ORTHO05D009306 6.1e-57 226.1 334 40.1
HanXRQChr11g0338411 Helianthus annuus HOM05D007403 ORTHO05D009306 1.0e-56 225.3 399 36.6
Ciclev10000975m.g Citrus clementina HOM05D007403 ORTHO05D009306 1.8e-56 224.6 394 36.5
BolC2t12064H Brassica oleracea HOM05D007403 ORTHO05D009306 4.0e-56 223.4 407 34.4
TPR.G15151 Trifolium pratense HOM05D007403 ORTHO05D009306 4.0e-56 223.4 403 36.5
Nitab4.5_0011920g0020 Nicotiana tabacum HOM05D007403 ORTHO05D009306 5.2e-56 223.0 314 43.0
Sabra03G0012400 Salix brachista HOM05D007403 ORTHO05D009306 1.2e-55 221.9 427 36.1
Ah.12g064270 Amaranthus hybridus HOM05D007403 ORTHO05D009306 1.5e-55 221.5 405 34.6
AL6G36340 Arabidopsis lyrata HOM05D007403 ORTHO05D009306 2.6e-55 220.7 413 33.9
Lj6g0017074 Lotus japonicus HOM05D007403 ORTHO05D009306 2.6e-55 220.7 412 36.4
RcHm_v2.0_Chr7g0224451 Rosa chinensis HOM05D007403 ORTHO05D009306 2.2e-54 217.6 413 35.8
Sp2g22680 Schrenkiella parvula HOM05D007403 ORTHO05D009306 2.2e-54 217.6 409 34.2
BcaB07g29919 Brassica carinata HOM05D007403 ORTHO05D009306 2.8e-54 217.2 410 34.6
AT5G24750 Arabidopsis thaliana HOM05D007403 ORTHO05D009306 3.7e-54 216.9 410 33.9
CANSAT11G1055 Cannabis sativa HOM05D007403 ORTHO05D009306 3.7e-54 216.9 410 35.1
CiPaw.05G043100 Carya illinoinensis HOM05D007403 ORTHO05D009306 3.7e-54 216.9 290 42.4
AUR62024767 Chenopodium quinoa HOM05D007403 ORTHO05D009306 6.3e-54 216.1 407 35.6
Glyma.08G184700 Glycine max HOM05D007403 ORTHO05D009306 6.3e-54 216.1 406 37.7
Solyc01g104410.4 Solanum lycopersicum HOM05D007403 ORTHO05D009306 1.1e-53 215.3 402 37.3
Lalb_Chr18g0060841 Lupinus albus HOM05D007403 ORTHO05D009306 1.4e-53 214.9 410 34.9
AUR62037684 Chenopodium quinoa HOM05D007403 ORTHO05D009306 2.4e-53 214.2 409 35.2
DCAR_001817 Daucus carota HOM05D007403 ORTHO05D009306 1.2e-52 211.8 367 38.1
VMungo0540G0348 Vigna mungo HOM05D007403 ORTHO05D009306 2.7e-52 210.7 422 35.8
Manes.10G131400 Manihot esculenta HOM05D007403 ORTHO05D009306 3.5e-52 210.3 407 34.2
THA.LOC104798998 Tarenaya hassleriana HOM05D007403 ORTHO05D009306 5.9e-52 209.5 414 33.8
Aa31LG11G3980 Aethionema arabicum HOM05D007403 ORTHO05D009306 1.0e-51 208.8 453 31.6
Psat1g137240 Pisum sativum HOM05D007403 ORTHO05D009306 2.9e-51 207.2 408 35.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.6e-51 205.7 415 33.7
FvH4_5g30191 Fragaria vesca HOM05D007403 ORTHO05D009306 2.3e-48 197.6 407 32.9
Hma1.2p1_0557F.1_g178350 Hydrangea macrophylla HOM05D007403 ORTHO05D009306 8.9e-48 195.7 374 35.0
Lj5A250G19 Lonicera japonica HOM05D007403 ORTHO05D009306 8.9e-48 195.7 433 33.9
Phvul.006G212700 Phaseolus vulgaris HOM05D007403 ORTHO05D009306 5.8e-47 193.0 288 41.0
Sc06g0000280 Simmondsia chinensis HOM05D007403 ORTHO05D009306 2.2e-46 191.0 314 38.2
SalBow5G2609 Salvia bowleyana HOM05D007403 ORTHO05D009306 6.4e-46 189.5 453 31.8
Peaxi162Scf00011g00136 Petunia axillaris HOM05D007403 ORTHO05D009306 7.0e-45 186.0 232 44.8
Zm00001eb240350 Zea mays HOM05D007403 ORTHO05D009306 1.9e-42 177.9 314 38.5
PSO210G5116 Papaver somniferum HOM05D007403 ORTHO05D009306 3.6e-41 173.7 409 34.0
SEGI_38556 Sequoiadendron giganteum HOM05D007403 ORTHO05D009306 1.8e-40 171.4 239 40.6
Lsat_1_v5_gn_7_77881 Lactuca sativa HOM05D007403 ORTHO05D009306 2.9e-38 164.1 387 32.3
Gohir.A12G032700 Gossypium hirsutum HOM05D007403 ORTHO05D009306 1.4e-37 161.8 220 43.2
PGSC0003DMG400023750 Solanum tuberosum HOM05D007403 ORTHO05D009306 1.9e-37 161.4 221 43.9
PSO170G1442 Papaver somniferum HOM05D002224 ORTHO05D002446 2.4e-37 161.0 365 34.8
unitig_27.g24942 Utricularia gibba HOM05D007403 ORTHO05D009306 7.0e-37 159.5 427 31.1
SGA_v2.0_scaffold1G00325 Striga asiatica HOM05D007403 ORTHO05D009306 1.2e-36 158.7 422 30.6
CAN.G1352.31 Capsicum annuum HOM05D007403 ORTHO05D009306 7.8e-36 156.0 249 39.4
vmacro01773 Vaccinium macrocarpon HOM05D007403 ORTHO05D009306 2.5e-34 151.0 283 36.7
FAN08G0644 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.1e-33 146.0 440 30.7
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 4.0e-32 143.7 427 30.2
Os02g0210800 Oryza sativa ssp. japonica HOM05D007403 ORTHO05D009306 7.1e-29 132.9 175 42.9
Rhsim11G0131100 Rhododendron simsii HOM05D007403 ORTHO05D009306 1.7e-27 128.3 428 29.7
AUR62029925 Chenopodium quinoa HOM05D007403 ORTHO05D009306 3.0e-27 127.5 218 37.6
CBR_g32500 Chara braunii HOM05D007403 ORTHO05D000800 8.1e-25 119.4 220 35.9
Cpa.g.sc2.9 Carica papaya HOM05D007403 ORTHO05D009306 7.8e-20 102.8 115 45.2
Cre07.g317650 Chlamydomonas reinhardtii HOM05D007403 ORTHO05D009306 2.4e-16 91.3 233 26.6
Hma1.2p1_0557F.1_g178360 Hydrangea macrophylla HOM05D007403 ORTHO05D009306 1.2e-12 79.0 165 32.7
QL02p043717 Quercus lobata HOM05D002263 ORTHO05D012916 5.6e-10 70.1 91 40.7
Psat1g137280 Pisum sativum HOM05D007403 ORTHO05D009306 1.1e-08 65.9 119 35.3
Ah.12g060250 Amaranthus hybridus HOM05D007403 ORTHO05D009306 6.9e-08 63.2 178 29.2


User provided reference genes

Program Settings