Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0772 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 3.4e-203 711.4 358 100.0
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 2.6e-115 419.5 432 62.0
SMO353G0264 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 5.5e-36 156.0 152 60.5
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 9.1e-15 85.5 169 33.7
SMO353G0101 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 1.2e-14 85.1 73 63.0
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.3e-13 81.6 129 38.0
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 3.8e-13 80.1 156 32.1
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 6.5e-13 79.3 112 42.9
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 6.5e-13 79.3 154 32.5
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 6.5e-13 79.3 321 23.4
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.4e-12 78.2 179 32.4
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 5.5e-12 76.3 131 35.9
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 7.2e-12 75.9 159 30.2
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 9.4e-12 75.5 154 31.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 9.4e-12 75.5 140 32.9
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 9.4e-12 75.5 171 32.2
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 9.4e-12 75.5 140 32.9
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 9.4e-12 75.5 175 30.3
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-11 75.1 154 29.9
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 1.6e-11 74.7 195 32.3
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 2.1e-11 74.3 140 32.9
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 2.1e-11 74.3 153 30.7
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 2.1e-11 74.3 139 34.5
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 2.7e-11 73.9 131 33.6
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.7e-11 73.9 123 35.8
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 3.6e-11 73.6 154 29.2
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.1e-11 72.8 138 32.6
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.1e-11 72.8 138 32.6
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 6.1e-11 72.8 173 28.9
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 7.9e-11 72.4 140 33.6
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 7.9e-11 72.4 181 27.6
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 7.9e-11 72.4 119 36.1
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.0e-10 72.0 131 36.6
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.0e-10 72.0 212 31.6
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 1.4e-10 71.6 131 35.1
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 1.4e-10 71.6 173 28.9
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 3.0e-10 70.5 182 30.8
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.0e-10 70.5 159 32.1
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 3.0e-10 70.5 121 34.7
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 3.0e-10 70.5 140 30.7
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 3.0e-10 70.5 158 27.2
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 3.0e-10 70.5 179 27.9
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 3.9e-10 70.1 122 33.6
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 3.9e-10 70.1 122 33.6
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 3.9e-10 70.1 121 34.7
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 3.9e-10 70.1 140 30.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 3.9e-10 70.1 140 31.4
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 3.9e-10 70.1 173 28.9
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 5.1e-10 69.7 164 30.5
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 6.7e-10 69.3 159 28.9
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 6.7e-10 69.3 140 29.3
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 8.8e-10 68.9 119 35.3
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 8.8e-10 68.9 140 31.4
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 8.8e-10 68.9 121 36.4
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 1.1e-09 68.6 129 33.3
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.1e-09 68.6 134 35.1
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 1.1e-09 68.6 181 26.5
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 1.5e-09 68.2 127 34.6
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 2.0e-09 67.8 140 29.3
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 2.6e-09 67.4 162 28.4
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 4.4e-09 66.6 74 45.9
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 4.4e-09 66.6 138 33.3
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 5.7e-09 66.2 131 35.1
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 9.7e-09 65.5 121 34.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 9.7e-09 65.5 121 33.9
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 9.7e-09 65.5 139 32.4
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 9.7e-09 65.5 142 28.2
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.7e-08 64.7 121 33.9
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.7e-08 64.7 123 35.0
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 3.7e-08 63.5 140 27.1
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 3.7e-08 63.5 228 27.2
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 3.7e-08 63.5 119 32.8
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 4.8e-08 63.2 138 34.1
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 6.3e-08 62.8 121 33.1
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 6.3e-08 62.8 121 33.1
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 6.3e-08 62.8 121 32.2
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 6.3e-08 62.8 109 37.6
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 6.3e-08 62.8 121 33.1
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.1e-07 62.0 120 32.5
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.1e-07 62.0 162 28.4
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 1.4e-07 61.6 121 33.1
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 1.8e-07 61.2 139 29.5
Pp3c12_23820 Physcomitrium patens HOM05D005255 ORTHO05D006276 1.8e-07 61.2 138 31.2
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 2.4e-07 60.8 169 27.2
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 2.4e-07 60.8 169 27.2
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 3.1e-07 60.5 169 27.2
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 3.1e-07 60.5 139 28.8
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 3.1e-07 60.5 119 31.9
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.5e-06 58.2 121 31.4
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 3.5e-06 57.0 121 30.6


User provided reference genes

Program Settings