Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0633 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 1.0e-84 316.6 154 100.0
SMO364G0193 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 8.3e-66 253.8 154 81.2
SMO002G0012 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 1.6e-24 116.7 160 39.4
Potri.008G063900 Populus trichocarpa HOM05D003256 ORTHO05D001441 1.5e-14 83.6 156 33.3
MD01G1146400 Malus domestica HOM05D003256 ORTHO05D001441 5.6e-14 81.6 132 37.1
Manes.07G124900 Manihot esculenta HOM05D003256 ORTHO05D001441 9.6e-14 80.9 155 32.3
Sed0024300 Sechium edule HOM05D003256 ORTHO05D001441 9.6e-14 80.9 155 35.5
SEGI_07353 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.3e-13 80.5 147 34.0
Atru.chr12.248 Acer truncatum HOM05D003256 ORTHO05D001441 2.8e-13 79.3 154 32.5
CSS0012310 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 3.6e-13 79.0 154 32.5
Dinv34426 Davidia involucrata HOM05D003256 ORTHO05D001441 3.6e-13 79.0 154 31.8
QL08p062603 Quercus lobata HOM05D003256 ORTHO05D001441 6.2e-13 78.2 154 31.2
RcHm_v2.0_Chr1g0369311 Rosa chinensis HOM05D003256 ORTHO05D001441 6.2e-13 78.2 154 31.8
CSS0030450 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 1.1e-12 77.4 154 31.8
FAN06G1448 Fragaria x ananassa HOM05D003256 ORTHO05D005659 1.1e-12 77.4 154 32.5
Ciclev10033656m.g Citrus clementina HOM05D003256 ORTHO05D001441 1.4e-12 77.0 154 31.2
Peaxi162Scf00401g00006 Petunia axillaris HOM05D000080 ORTHO05D000053 1.4e-12 77.0 154 31.8
TAR633G0704 Trochodendron aralioides HOM05D003256 ORTHO05D001441 1.4e-12 77.0 155 32.9
FvH4_7g23970 Fragaria vesca HOM05D003256 ORTHO05D001441 1.8e-12 76.6 154 32.5
Prupe.2G245700 Prunus persica HOM05D003256 ORTHO05D005659 1.8e-12 76.6 156 30.8
SEGI_34505 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.8e-12 76.6 126 34.1
Lsat_1_v5_gn_8_12360 Lactuca sativa HOM05D003256 ORTHO05D001441 2.4e-12 76.3 153 32.7
ClCG07G003930 Citrullus lanatus HOM05D003256 ORTHO05D001441 3.1e-12 75.9 154 31.8
Eucgr.G03027 Eucalyptus grandis HOM05D003256 ORTHO05D001441 3.1e-12 75.9 155 32.9
FAN10G1586 Fragaria x ananassa HOM05D003256 ORTHO05D001441 4.0e-12 75.5 154 31.8
Phvul.008G226800 Phaseolus vulgaris HOM05D003256 ORTHO05D001441 5.3e-12 75.1 154 31.2
MELO3C025149.2 Cucumis melo HOM05D003256 ORTHO05D005659 6.9e-12 74.7 154 31.2
DCAR_011785 Daucus carota HOM05D003256 ORTHO05D005659 6.9e-12 74.7 154 30.5
SEGI_41389 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 6.9e-12 74.7 132 31.8
CsaV3_5G008890 Cucumis sativus L. HOM05D003256 ORTHO05D001441 9.0e-12 74.3 154 31.2
FAN03G3030 Fragaria x ananassa HOM05D003256 ORTHO05D001441 9.0e-12 74.3 154 31.8
Hma1.2p1_0026F.1_g016990 Hydrangea macrophylla HOM05D003256 ORTHO05D001441 9.0e-12 74.3 154 33.1
Mapoly0029s0035 Marchantia polymorpha HOM05D001922 ORTHO05D001441 1.2e-11 73.9 155 29.7
Psat2g035280 Pisum sativum HOM05D003256 ORTHO05D001441 1.2e-11 73.9 154 31.2
Glyma.14G062400 Glycine max HOM05D003256 ORTHO05D001441 2.0e-11 73.2 154 31.2
Aqoxy1G00709 Aquilegia oxysepala HOM05D003256 ORTHO05D001441 2.6e-11 72.8 154 29.9
Medtr5g081780 Medicago truncatula HOM05D003256 ORTHO05D001441 3.4e-11 72.4 150 31.3
Migut.F01435 Erythranthe guttata HOM05D003256 ORTHO05D001441 4.5e-11 72.0 154 29.2
Oeu003436.1 Olea europaea HOM05D003256 ORTHO05D001441 9.9e-11 70.9 153 30.1
Pp3c7_25770 Physcomitrium patens HOM05D021802 ORTHO05D001441 1.3e-10 70.5 116 31.9
Cpa.g.sc19.220 Carica papaya HOM05D003256 ORTHO05D001441 1.7e-10 70.1 154 30.5
TPR.G8048 Trifolium pratense HOM05D003256 ORTHO05D001441 1.7e-10 70.1 154 31.2
AagrBONN_evm.TU.Sc2ySwM_117.997 Anthoceros agrestis HOM05D003256 ORTHO05D001441 3.8e-10 68.9 153 29.4
LjContig00357g0006095 Lotus japonicus HOM05D003256 ORTHO05D001441 4.9e-10 68.6 154 29.9
SMO367G0825 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 4.9e-10 68.6 152 34.2
TWI53G0608 Tripterygium wilfordii HOM05D003256 ORTHO05D001441 1.4e-09 67.0 154 30.5
Gohir.A07G008100 Gossypium hirsutum HOM05D001922 ORTHO05D001441 2.4e-09 66.2 125 33.6
Pp3c3_3850 Physcomitrium patens HOM05D021802 ORTHO05D001441 2.4e-09 66.2 152 26.3
AagrBONN_evm.TU.Sc2ySwM_117.983 Anthoceros agrestis HOM05D003256 ORTHO05D001441 3.2e-09 65.9 152 30.9
Cfa003197 Carpinus fangiana HOM05D001922 ORTHO05D001441 7.1e-09 64.7 125 33.6
Mapoly0006s0151 Marchantia polymorpha HOM05D038656 ORTHO05D001441 1.6e-08 63.5 124 28.2
AagrBONN_evm.TU.Sc2ySwM_228.237 Anthoceros agrestis HOM05D003256 ORTHO05D001441 2.7e-08 62.8 160 29.4
CiPaw.02G189500 Carya illinoinensis HOM05D003256 ORTHO05D001441 3.5e-08 62.4 113 34.5
SMO203G0066 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 3.5e-08 62.4 131 27.5
Gohir.D07G008500 Gossypium hirsutum HOM05D001922 ORTHO05D001441 6.0e-08 61.6 125 32.0
Gorai.001G008600 Gossypium raimondii HOM05D001922 ORTHO05D001441 6.0e-08 61.6 125 32.0
SEGI_03891 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 7.9e-08 61.2 153 27.5
Ah.09g230740 Amaranthus hybridus HOM05D001922 ORTHO05D001441 2.3e-07 59.7 127 33.9
SEGI_30345 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 3.9e-07 58.9 156 26.3
Lj2g0013480 Lotus japonicus HOM05D001922 ORTHO05D001441 1.9e-06 56.6 126 31.0
TPR.G33075 Trifolium pratense HOM05D001922 ORTHO05D001441 2.5e-06 56.2 125 33.6
MBI01_g15520_MAGBIO Magnolia biondii HOM05D001922 ORTHO05D001441 7.4e-06 54.7 127 29.9
MBI16_g18432_MAGBIO Magnolia biondii HOM05D001922 ORTHO05D001441 7.4e-06 54.7 127 30.7
SEGI_16616 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 7.4e-06 54.7 147 27.2
Sc09g0009420 Simmondsia chinensis HOM05D001922 ORTHO05D001441 7.4e-06 54.7 129 27.9
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 9.6e-06 54.3 112 31.2


User provided reference genes

Program Settings