Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0577 Selaginella moellendorffii HOM05D007987 ORTHO05D010121 9.7e-132 473.4 224 100.0
SMO364G0947 Selaginella moellendorffii HOM05D007987 ORTHO05D010121 1.4e-106 389.8 220 86.4
Gohir.A10G223200 Gossypium hirsutum HOM05D007987 ORTHO05D010121 1.0e-64 250.8 218 54.1
COL.COLO4_25518 Corchorus olitorius HOM05D007987 ORTHO05D010121 1.9e-63 246.5 218 53.2
Duzib114G0697 Durio zibethinus HOM05D007987 ORTHO05D010121 1.9e-63 246.5 218 53.7
Thecc.10G034800 Theobroma cacao HOM05D007987 ORTHO05D010121 3.3e-63 245.7 218 53.7
Gohir.D10G235600 Gossypium hirsutum HOM05D007987 ORTHO05D010121 4.3e-63 245.4 218 53.2
Gorai.011G269300 Gossypium raimondii HOM05D007987 ORTHO05D010121 5.6e-63 245.0 218 53.2
Hma1.2p1_0285F.1_g113960 Hydrangea macrophylla HOM05D007987 ORTHO05D010121 1.2e-62 243.8 216 53.2
CiPaw.05G167500 Carya illinoinensis HOM05D007987 ORTHO05D010121 2.8e-62 242.7 218 52.8
Mapoly0022s0013 Marchantia polymorpha HOM05D007987 ORTHO05D010121 2.8e-62 242.7 216 52.8
Rhsim04G0167600 Rhododendron simsii HOM05D007987 ORTHO05D010121 3.6e-62 242.3 233 50.2
Cfa008728 Carpinus fangiana HOM05D007987 ORTHO05D010121 1.4e-61 240.4 215 52.6
Gohir.A13G017700 Gossypium hirsutum HOM05D007987 ORTHO05D010121 1.4e-61 240.4 218 52.8
BcaC09g52171 Brassica carinata HOM05D007987 ORTHO05D010121 1.8e-61 240.0 217 55.3
Potri.010G169900 Populus trichocarpa HOM05D007987 ORTHO05D010121 1.8e-61 240.0 215 51.2
C01p05130 Brassica napus HOM05D007987 ORTHO05D010121 2.3e-61 239.6 217 54.8
HanXRQChr03g0064731 Helianthus annuus HOM05D007987 ORTHO05D010121 4.0e-61 238.8 219 52.1
Gorai.013G020800 Gossypium raimondii HOM05D007987 ORTHO05D010121 5.2e-61 238.4 218 52.3
HanXRQChr03g0064631 Helianthus annuus HOM05D007987 ORTHO05D010121 5.2e-61 238.4 219 52.1
Os02g0829600 Oryza sativa ssp. japonica HOM05D007987 ORTHO05D010121 5.2e-61 238.4 220 50.0
PSO063G4427 Papaver somniferum HOM05D007987 ORTHO05D010121 5.2e-61 238.4 215 47.9
Lsat_1_v5_gn_7_49141 Lactuca sativa HOM05D007987 ORTHO05D010121 6.8e-61 238.0 219 51.1
SalBow2G3296 Salvia bowleyana HOM05D007987 ORTHO05D010121 8.9e-61 237.7 221 49.3
BolC1t00493H Brassica oleracea HOM05D007987 ORTHO05D010121 2.0e-60 236.5 217 54.4
Pp3c22_8440 Physcomitrium patens HOM05D007987 ORTHO05D010121 2.6e-60 236.1 222 52.3
Peaxi162Scf00818g00124 Petunia axillaris HOM05D007987 ORTHO05D010121 3.4e-60 235.7 220 49.5
AL7G17980 Arabidopsis lyrata HOM05D007987 ORTHO05D010121 5.8e-60 235.0 217 52.5
A01p04720 Brassica napus HOM05D007987 ORTHO05D010121 7.6e-60 234.6 221 54.3
ECA240G3409 Erigeron canadensis HOM05D007987 ORTHO05D010121 7.6e-60 234.6 219 50.7
Sp7g31280 Schrenkiella parvula HOM05D007987 ORTHO05D010121 7.6e-60 234.6 217 52.1
THA.LOC104807169 Tarenaya hassleriana HOM05D007987 ORTHO05D010121 7.6e-60 234.6 217 52.5
Nitab4.5_0001001g0020 Nicotiana tabacum HOM05D007987 ORTHO05D010121 9.9e-60 234.2 220 48.2
Carub.0007s0691 Capsella rubella HOM05D007987 ORTHO05D010121 1.7e-59 233.4 217 52.1
CAN.G666.15 Capsicum annuum HOM05D007987 ORTHO05D010121 1.7e-59 233.4 220 49.1
Os02g0829500 Oryza sativa ssp. japonica HOM05D007987 ORTHO05D010121 1.7e-59 233.4 221 49.8
Sabra10G0129700 Salix brachista HOM05D007987 ORTHO05D010121 1.7e-59 233.4 226 48.7
Eucgr.J00841 Eucalyptus grandis HOM05D007987 ORTHO05D010121 2.2e-59 233.0 218 49.5
PSO782G0248 Papaver somniferum HOM05D007987 ORTHO05D010121 4.9e-59 231.9 215 48.4
unitig_699.g19972 Utricularia gibba HOM05D007987 ORTHO05D010121 4.9e-59 231.9 221 48.4
CARHR241640 Cardamine hirsuta HOM05D007987 ORTHO05D010121 6.4e-59 231.5 217 51.2
Aa31sc280G10 Aethionema arabicum HOM05D007987 ORTHO05D010121 1.1e-58 230.7 217 50.7
CiPaw.05G167600 Carya illinoinensis HOM05D007987 ORTHO05D010121 1.1e-58 230.7 218 50.5
Eucgr.J00842 Eucalyptus grandis HOM05D007987 ORTHO05D010121 1.9e-58 229.9 218 48.2
Lj6A722G91 Lonicera japonica HOM05D007987 ORTHO05D010121 5.4e-58 228.4 218 48.2
ATR0618G174 Amborella trichopoda HOM05D007987 ORTHO05D010121 7.1e-58 228.0 216 49.5
MBI06_g22351_MAGBIO Magnolia biondii HOM05D007987 ORTHO05D010121 7.1e-58 228.0 219 48.4
AT4G33540 Arabidopsis thaliana HOM05D007987 ORTHO05D010121 9.2e-58 227.6 217 51.2
COL.COLO4_25506 Corchorus olitorius HOM05D007987 ORTHO05D010121 1.2e-57 227.3 215 49.8
PSO063G6796 Papaver somniferum HOM05D007987 ORTHO05D010121 1.2e-57 227.3 226 46.5
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 1.3e-56 223.8 233 46.8
Thhalv10025570m.g Eutrema salsugineum HOM05D007987 ORTHO05D010121 1.5e-55 220.3 218 50.9
BraA01t00455Z Brassica rapa HOM05D007987 ORTHO05D010121 6.8e-53 211.5 193 54.9
Mapoly0022s0011 Marchantia polymorpha HOM05D007987 ORTHO05D010121 4.4e-52 208.8 199 49.7
PSO782G2203 Papaver somniferum HOM05D007987 ORTHO05D010121 1.3e-51 207.2 215 43.3
Gohir.D13G018800 Gossypium hirsutum HOM05D007987 ORTHO05D010121 6.4e-51 204.9 193 51.3
Haze_20414 Corylus avellana HOM05D007987 ORTHO05D010121 8.4e-51 204.5 215 46.0
SEGI_07326 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 1.7e-48 196.8 218 45.0
Hma1.2p1_1487F.1_g286560 Hydrangea macrophylla HOM05D007987 ORTHO05D010121 1.1e-47 194.1 177 52.5
TWI77G0749 Tripterygium wilfordii HOM05D007987 ORTHO05D010121 1.0e-40 171.0 147 55.1
Haze_20417 Corylus avellana HOM05D007987 ORTHO05D010121 3.3e-39 166.0 134 56.7
Cre24.g755847 Chlamydomonas reinhardtii HOM05D007987 ORTHO05D010121 5.8e-36 155.2 250 34.4
SEGI_17347 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 8.4e-35 151.4 130 53.8
AagrBONN_evm.TU.Sc2ySwM_344.3454 Anthoceros agrestis HOM05D007987 ORTHO05D010121 7.9e-33 144.8 177 42.4
DCAR_026913 Daucus carota HOM05D007987 ORTHO05D010121 4.2e-26 122.5 117 47.9
AagrBONN_evm.TU.Sc2ySwM_344.3456 Anthoceros agrestis HOM05D007987 ORTHO05D010121 3.5e-25 119.4 127 46.5
Gohir.D10G235824 Gossypium hirsutum HOM05D007987 ORTHO05D010121 1.9e-23 113.6 97 55.7
PRCOL_00006988 Prasinoderma coloniale HOM05D007987 ORTHO05D010121 1.8e-21 107.1 234 30.3
Zm00001eb190660 Zea mays HOM05D007987 ORTHO05D010121 1.5e-20 104.0 112 44.6
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.1e-15 87.8 91 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3455 Anthoceros agrestis HOM05D007987 ORTHO05D010121 5.7e-15 85.5 84 51.2
SEGI_35505 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 1.7e-06 57.4 71 40.8
CARHR124980 Cardamine hirsuta HOM05D002042 ORTHO05D003928 2.2e-06 57.0 114 33.3
Aa31LG1G25180 Aethionema arabicum HOM05D002042 ORTHO05D003928 6.3e-06 55.5 116 31.9
Atru.chr4.1264 Acer truncatum HOM05D002042 ORTHO05D003928 8.2e-06 55.1 114 33.3


User provided reference genes

Program Settings