Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 5.0e-97 357.8 188 100.0
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.9e-80 302.8 188 88.8
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 5.4e-35 151.8 180 47.2
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 9.2e-35 151.0 179 49.7
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 4.6e-34 148.7 179 49.7
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.6e-34 148.7 181 48.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 4.6e-34 148.7 180 47.8
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.0e-33 147.5 179 48.6
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 1.3e-33 147.1 179 48.0
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.7e-33 146.7 179 49.2
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 3.0e-33 146.0 181 48.1
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 5.1e-33 145.2 179 48.6
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 8.6e-33 144.4 180 47.2
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 1.1e-32 144.1 180 47.2
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.5e-32 143.7 179 45.8
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 1.5e-32 143.7 179 48.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.5e-32 142.9 179 46.9
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.3e-32 142.5 179 46.9
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 3.3e-32 142.5 181 46.4
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 4.3e-32 142.1 180 47.2
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 5.6e-32 141.7 181 45.9
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 5.6e-32 141.7 180 47.2
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 5.6e-32 141.7 180 47.8
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.3e-32 141.4 181 45.9
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 9.5e-32 141.0 179 48.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 9.5e-32 141.0 181 45.3
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.2e-31 140.6 179 46.4
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.2e-31 140.6 179 46.4
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 2.1e-31 139.8 180 46.7
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.1e-31 139.8 181 45.3
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.8e-31 139.4 180 46.7
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 3.6e-31 139.0 180 46.1
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 4.7e-31 138.7 179 46.9
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 6.2e-31 138.3 183 42.6
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 6.2e-31 138.3 179 45.8
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 8.1e-31 137.9 173 48.6
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 8.1e-31 137.9 180 45.6
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.1e-30 137.5 180 46.1
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.1e-30 137.5 180 45.0
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.4e-30 137.1 179 45.3
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.8e-30 136.7 179 44.7
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 1.8e-30 136.7 180 45.0
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.4e-30 136.3 179 45.3
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.4e-30 136.3 179 46.4
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 3.1e-30 136.0 179 44.1
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 5.2e-30 135.2 180 44.4
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 6.8e-30 134.8 179 44.7
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 6.8e-30 134.8 193 44.6
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 6.8e-30 134.8 176 46.6
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.2e-29 134.0 179 44.1
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.2e-29 134.0 181 42.5
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.0e-29 133.3 179 44.1
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 2.0e-29 133.3 179 44.1
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 2.0e-29 133.3 181 46.4
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 2.0e-29 133.3 202 42.6
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 2.6e-29 132.9 187 47.1
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.6e-29 132.9 181 42.0
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 2.6e-29 132.9 176 44.3
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 3.4e-29 132.5 184 44.0
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.4e-29 132.5 184 47.3
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 4.4e-29 132.1 167 46.1
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 4.4e-29 132.1 178 43.3
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 5.8e-29 131.7 180 42.8
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.3e-28 130.6 179 43.6
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 2.2e-28 129.8 181 43.6
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 2.2e-28 129.8 177 44.6
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 2.9e-28 129.4 183 46.4
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.9e-28 129.4 190 42.6
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 3.8e-28 129.0 180 42.2
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 3.8e-28 129.0 181 44.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 3.8e-28 129.0 176 44.3
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.8e-28 129.0 187 46.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 4.9e-28 128.6 180 42.2
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 4.9e-28 128.6 180 42.8
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 4.9e-28 128.6 182 44.5
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 8.4e-28 127.9 185 45.4
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.4e-27 127.1 189 45.0
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 5.4e-27 125.2 161 46.0
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 7.1e-27 124.8 161 44.7
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 1.2e-26 124.0 207 41.1
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.1e-26 123.2 161 46.0
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 6.0e-26 121.7 179 43.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 6.0e-26 121.7 179 41.9
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.3e-25 120.6 158 45.6
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.7e-25 120.2 160 45.0
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.7e-25 120.2 179 41.9
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.3e-25 119.8 183 44.8
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.1e-24 117.5 158 44.9
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.9e-24 116.7 159 45.3
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 3.3e-24 115.9 179 41.9
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 5.6e-24 115.2 155 44.5
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 5.6e-24 115.2 160 44.4
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 1.6e-23 113.6 179 40.2
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.1e-23 113.2 155 45.2
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 2.8e-23 112.8 179 40.8
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.4e-22 109.8 179 38.5
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 6.9e-22 108.2 161 42.2
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.2e-21 107.5 151 45.0
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.6e-21 106.3 151 43.7
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.8e-21 105.1 153 41.8
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.4e-19 100.5 152 40.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.2e-19 99.0 152 41.4
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 7.1e-19 98.2 181 39.8
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.3e-17 93.2 103 48.5
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 8.7e-17 91.3 95 50.5
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 9.0e-14 81.3 245 30.2
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.0e-13 80.1 116 43.1
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.2e-10 70.9 90 44.4
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 1.8e-09 67.0 104 39.4
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 8.7e-09 64.7 82 45.1
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 1.5e-08 63.9 55 50.9
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 2.1e-07 60.1 186 30.1
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 8.1e-07 58.2 118 39.8
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-06 57.8 151 34.4
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.4e-06 56.6 105 40.0
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.1e-06 56.2 67 43.3


User provided reference genes

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