Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.1e-142 510.0 255 100.0
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 1.1e-25 121.3 269 30.1
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.4e-25 120.9 303 28.7
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.8e-25 120.6 303 28.7
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.0e-24 117.1 304 28.6
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 5.8e-24 115.5 293 29.4
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.8e-24 115.5 273 29.3
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 7.6e-24 115.2 276 29.3
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 9.9e-24 114.8 290 30.3
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.3e-23 114.4 294 28.9
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 2.2e-23 113.6 267 30.3
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 2.9e-23 113.2 279 28.0
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.8e-23 112.8 294 27.9
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.8e-23 112.8 294 27.9
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 4.9e-23 112.5 282 29.8
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 1.1e-22 111.3 303 27.7
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.4e-22 110.9 278 29.1
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.4e-22 110.9 281 29.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.9e-22 110.5 283 28.3
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.9e-22 110.5 265 30.2
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.9e-22 110.5 302 27.8
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 2.4e-22 110.2 270 28.9
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 2.4e-22 110.2 282 29.4
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 2.4e-22 110.2 281 28.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 3.2e-22 109.8 283 29.0
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 3.2e-22 109.8 304 27.6
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.2e-22 109.8 276 29.0
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 5.4e-22 109.0 287 28.9
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 5.4e-22 109.0 276 28.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 7.1e-22 108.6 264 29.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 7.1e-22 108.6 259 30.1
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 7.1e-22 108.6 251 30.7
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 9.3e-22 108.2 231 32.5
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.2e-21 107.8 282 27.3
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.6e-21 107.5 283 27.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.6e-21 107.5 282 27.3
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.1e-21 107.1 260 29.2
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.1e-21 107.1 254 30.3
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.1e-21 107.1 266 27.8
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 2.1e-21 107.1 289 28.4
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 2.7e-21 106.7 265 27.5
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 2.7e-21 106.7 282 27.7
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 4.6e-21 105.9 269 28.6
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 1.3e-20 104.4 262 29.4
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 1.3e-20 104.4 262 29.4
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.3e-20 104.4 301 28.2
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.8e-20 104.0 269 28.3
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.8e-20 104.0 287 28.2
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.8e-20 104.0 295 29.8
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 1.8e-20 104.0 258 28.7
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.8e-20 104.0 306 26.5
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 2.3e-20 103.6 297 26.9
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 3.0e-20 103.2 296 27.7
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 3.0e-20 103.2 302 28.5
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 3.9e-20 102.8 268 30.2
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 3.9e-20 102.8 295 27.8
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.1e-19 101.3 305 27.9
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.1e-19 101.3 277 27.1
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.1e-19 101.3 295 27.1
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.5e-19 100.9 255 29.8
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.5e-19 100.9 223 30.0
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.9e-19 100.5 283 29.3
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 1.9e-19 100.5 269 26.4
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.9e-19 100.5 278 28.1
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 2.5e-19 100.1 301 28.9
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 3.3e-19 99.8 266 28.2
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 3.3e-19 99.8 248 27.0
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 4.3e-19 99.4 302 27.8
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 4.3e-19 99.4 267 27.7
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 4.3e-19 99.4 255 29.4
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 5.6e-19 99.0 255 29.4
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 7.4e-19 98.6 214 31.3
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 7.4e-19 98.6 268 28.0
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 7.4e-19 98.6 234 29.1
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 7.4e-19 98.6 281 26.7
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 7.4e-19 98.6 294 26.5
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 7.4e-19 98.6 279 28.3
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 9.6e-19 98.2 237 28.7
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 9.6e-19 98.2 280 27.1
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.3e-18 97.8 255 29.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.6e-18 97.4 270 27.4
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.6e-18 97.4 303 26.1
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.8e-18 96.7 279 30.1
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 3.7e-18 96.3 270 28.1
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.8e-18 95.9 231 29.0
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.2e-18 95.5 245 29.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 8.1e-18 95.1 285 26.3
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.4e-17 94.4 288 26.4
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.4e-17 93.6 302 28.5
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 2.4e-17 93.6 231 29.4
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 5.3e-17 92.4 277 27.4
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.2e-16 91.3 273 24.9
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 1.2e-16 91.3 259 26.6
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.5e-16 90.9 298 25.2
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.6e-16 90.1 272 26.8
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 3.4e-16 89.7 254 28.7
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.4e-15 85.1 310 23.9
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.1e-14 84.7 310 23.9
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.9e-14 84.0 142 33.1
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.6e-13 79.3 238 27.3
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.3e-12 77.8 207 31.9
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 4.3e-11 72.8 295 24.4
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.7e-11 72.4 158 27.8
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.4e-09 67.8 255 25.5
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.0e-08 63.9 183 27.3
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 2.2e-07 60.5 55 49.1
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 5.0e-07 59.3 102 31.4
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 8.4e-07 58.5 140 28.6


User provided reference genes

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