Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0282 Selaginella moellendorffii HOM05D003400 ORTHO05D003687 1.7e-152 542.7 285 100.0
MD01G1167700 Malus domestica HOM05D003400 ORTHO05D003687 1.3e-11 74.7 205 28.8
SGA_v2.0_scaffold60G20888 Striga asiatica HOM05D003400 ORTHO05D003687 6.3e-11 72.4 163 33.1
Zm00001eb231310 Zea mays HOM05D003400 ORTHO05D003687 1.1e-10 71.6 112 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4066 Anthoceros agrestis HOM05D003400 ORTHO05D003687 1.4e-10 71.2 170 31.2
Atru.chr12.183 Acer truncatum HOM05D003400 ORTHO05D003687 3.1e-10 70.1 170 31.2
Pp3c27_4350 Physcomitrium patens HOM05D027247 ORTHO05D003687 3.1e-10 70.1 105 40.0
SGA_v2.0_scaffold44G16620 Striga asiatica HOM05D003400 ORTHO05D003687 4.1e-10 69.7 97 41.2
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 5.3e-10 69.3 184 28.3
PSO017G2438 Papaver somniferum HOM05D003400 ORTHO05D003687 1.6e-09 67.8 96 38.5
Mapoly0081s0073 Marchantia polymorpha HOM05D003400 ORTHO05D003687 2.0e-09 67.4 144 32.6
PSO170G4360 Papaver somniferum HOM05D003400 ORTHO05D003687 2.0e-09 67.4 96 38.5
Eucgr.J00113 Eucalyptus grandis HOM05D003400 ORTHO05D003687 2.7e-09 67.0 175 32.6
CSS0037757 Camellia sinensis var. sinensis HOM05D003400 ORTHO05D003687 3.5e-09 66.6 211 28.9
Cc02_g05370 Coffea canephora HOM05D003400 ORTHO05D003687 3.5e-09 66.6 118 39.0
Migut.F01244 Erythranthe guttata HOM05D003400 ORTHO05D003687 3.5e-09 66.6 140 36.4
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 3.5e-09 66.6 131 35.1
BraA02t04839Z Brassica rapa HOM05D003400 ORTHO05D003687 4.5e-09 66.2 168 31.5
HanXRQChr08g0221571 Helianthus annuus HOM05D003400 ORTHO05D003687 4.5e-09 66.2 159 30.8
TAR369G0853 Trochodendron aralioides HOM05D003400 ORTHO05D003687 4.5e-09 66.2 224 29.9
Ciclev10030981m.g Citrus clementina HOM05D003400 ORTHO05D003687 5.9e-09 65.9 182 31.9
Migut.F00607 Erythranthe guttata HOM05D003400 ORTHO05D003687 5.9e-09 65.9 157 32.5
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 5.9e-09 65.9 177 29.9
MELO3C020148.2 Cucumis melo HOM05D003400 ORTHO05D003687 7.7e-09 65.5 170 30.0
Os02g0132200 Oryza sativa ssp. japonica HOM05D003400 ORTHO05D003687 7.7e-09 65.5 184 31.0
CAN.G24.15 Capsicum annuum HOM05D003400 ORTHO05D003687 1.0e-08 65.1 218 28.9
GSVIVG01032673001 Vitis vinifera HOM05D003400 ORTHO05D003687 1.0e-08 65.1 217 28.6
MD07G1233700 Malus domestica HOM05D003400 ORTHO05D003687 1.3e-08 64.7 308 23.7
BcaB05g21725 Brassica carinata HOM05D003400 ORTHO05D003687 1.7e-08 64.3 102 33.3
THA.LOC104813796 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 1.7e-08 64.3 164 31.1
AT5G05240 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 2.9e-08 63.5 179 28.5
ECA232G0413 Erigeron canadensis HOM05D003400 ORTHO05D003687 2.9e-08 63.5 159 32.7
MBI15_g01598_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 2.9e-08 63.5 109 36.7
Manes.07G141701 Manihot esculenta HOM05D003400 ORTHO05D003687 2.9e-08 63.5 152 32.9
Manes.07G143400 Manihot esculenta HOM05D003400 ORTHO05D003687 2.9e-08 63.5 212 28.3
QL08p064852 Quercus lobata HOM05D003400 ORTHO05D003687 2.9e-08 63.5 180 30.6
THA.LOC104823169 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.9e-08 63.5 105 37.1
CsaV3_5G010950 Cucumis sativus L. HOM05D003400 ORTHO05D003687 3.8e-08 63.2 172 30.2
PGR044G0713 Punica granatum HOM05D003400 ORTHO05D003687 3.8e-08 63.2 117 35.9
Actinidia01001 Actinidia chinensis HOM05D003400 ORTHO05D003687 5.0e-08 62.8 214 28.0
CANSAT21G0473 Cannabis sativa HOM05D003400 ORTHO05D003687 5.0e-08 62.8 200 27.5
Medtr1g007460 Medicago truncatula HOM05D003400 ORTHO05D003687 5.0e-08 62.8 205 29.3
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 5.0e-08 62.8 202 27.7
TAR636G2149 Trochodendron aralioides HOM05D003400 ORTHO05D003687 5.0e-08 62.8 176 30.7
Nn2g10302 Nelumbo nucifera HOM05D003400 ORTHO05D003687 6.5e-08 62.4 201 30.8
Nitab4.5_0000171g0020 Nicotiana tabacum HOM05D003400 ORTHO05D003687 6.5e-08 62.4 157 33.8
Actinidia13648 Actinidia chinensis HOM05D003400 ORTHO05D003687 8.5e-08 62.0 169 30.8
Rhsim09G0185900 Rhododendron simsii HOM05D003400 ORTHO05D003687 8.5e-08 62.0 107 35.5
TWI09G1099 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 8.5e-08 62.0 283 27.2
A10p30950 Brassica napus HOM05D003400 ORTHO05D003687 1.1e-07 61.6 165 27.3
BraA10t45140Z Brassica rapa HOM05D003400 ORTHO05D003687 1.1e-07 61.6 165 27.3
Solyc06g048970.3 Solanum lycopersicum HOM05D003400 ORTHO05D003687 1.1e-07 61.6 211 30.3
Sopen06g015320 Solanum pennellii HOM05D003400 ORTHO05D003687 1.1e-07 61.6 213 31.5
CDE04G0272 Ceratophyllum demersum HOM05D003400 ORTHO05D003687 1.5e-07 61.2 213 28.6
AUR62030610 Chenopodium quinoa HOM05D003400 ORTHO05D003687 1.5e-07 61.2 255 27.8
Nitab4.5_0002745g0010 Nicotiana tabacum HOM05D003400 ORTHO05D003687 1.5e-07 61.2 157 33.8
Dinv21846 Davidia involucrata HOM05D003400 ORTHO05D003687 1.9e-07 60.8 224 27.2
FvH4_7g25930 Fragaria vesca HOM05D003400 ORTHO05D003687 1.9e-07 60.8 201 27.9
HanXRQChr09g0252221 Helianthus annuus HOM05D003400 ORTHO05D003687 1.9e-07 60.8 193 32.1
Psat6g036400 Pisum sativum HOM05D003400 ORTHO05D003687 1.9e-07 60.8 204 28.9
Thhalv10013224m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 2.5e-07 60.5 124 30.6
Sed0002948 Sechium edule HOM05D003400 ORTHO05D003687 2.5e-07 60.5 149 31.5
Aa31LG11G6090 Aethionema arabicum HOM05D003400 ORTHO05D003687 3.2e-07 60.1 204 25.0
FAN06G1869 Fragaria x ananassa HOM05D003400 ORTHO05D003687 3.2e-07 60.1 201 27.9
Lj1C967G2 Lonicera japonica HOM05D003400 ORTHO05D003687 3.2e-07 60.1 175 34.9
C02p02230 Brassica napus HOM05D003400 ORTHO05D003687 4.2e-07 59.7 153 30.1
CANSAT21G1871 Cannabis sativa HOM05D003400 ORTHO05D003687 4.2e-07 59.7 240 25.8
CiPaw.01G306600 Carya illinoinensis HOM05D003400 ORTHO05D003687 4.2e-07 59.7 175 30.9
Potri.019G058200 Populus trichocarpa HOM05D003400 ORTHO05D003687 4.2e-07 59.7 175 31.4
TWI53G0017 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 4.2e-07 59.7 284 25.7
ECA233G0468 Erigeron canadensis HOM05D003400 ORTHO05D003687 5.5e-07 59.3 180 30.0
FAN01G0709 Fragaria x ananassa HOM05D003400 ORTHO05D003687 5.5e-07 59.3 201 27.4
MBI03_g15591_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 5.5e-07 59.3 153 32.0
Manes.10G001400 Manihot esculenta HOM05D003400 ORTHO05D003687 5.5e-07 59.3 211 27.5
RcHm_v2.0_Chr1g0372301 Rosa chinensis HOM05D003400 ORTHO05D003687 5.5e-07 59.3 202 27.7
MSTRG.8889 Avicennia marina HOM05D003400 ORTHO05D003687 7.2e-07 58.9 215 28.8
BolC2t06192H Brassica oleracea HOM05D003400 ORTHO05D003687 7.2e-07 58.9 169 30.2
MSTRG.171 Avicennia marina HOM05D003400 ORTHO05D003687 9.4e-07 58.5 181 29.8
ClCG07G005110 Citrullus lanatus HOM05D003400 ORTHO05D003687 9.4e-07 58.5 158 27.8
FAN03G2499 Fragaria x ananassa HOM05D003400 ORTHO05D003687 9.4e-07 58.5 201 27.4
FAN10G0615 Fragaria x ananassa HOM05D003400 ORTHO05D003687 9.4e-07 58.5 201 27.4
Lsat_1_v5_gn_9_60041 Lactuca sativa HOM05D003400 ORTHO05D003687 9.4e-07 58.5 109 35.8
Lj1g0015659 Lotus japonicus HOM05D003400 ORTHO05D003687 9.4e-07 58.5 208 29.3
Oeu063984.1 Olea europaea HOM05D003400 ORTHO05D003687 9.4e-07 58.5 216 29.6
Peaxi162Scf00739g00321 Petunia axillaris HOM05D003400 ORTHO05D003687 9.4e-07 58.5 152 30.9
Thecc.10G181000 Theobroma cacao HOM05D003400 ORTHO05D003687 9.4e-07 58.5 241 26.6
C09p71460 Brassica napus HOM05D003400 ORTHO05D003687 1.2e-06 58.2 227 26.4
Rhsim03G0152500 Rhododendron simsii HOM05D003400 ORTHO05D003687 1.2e-06 58.2 261 27.2
BcaC06g32233 Brassica carinata HOM05D003400 ORTHO05D003687 1.6e-06 57.8 227 26.4
BolC9t59909H Brassica oleracea HOM05D003400 ORTHO05D003687 1.6e-06 57.8 227 26.4
Hma1.2p1_0292F.1_g115970 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 1.6e-06 57.8 232 27.2
Lsat_1_v5_gn_8_11440 Lactuca sativa HOM05D003400 ORTHO05D003687 1.6e-06 57.8 206 28.2
BraA03t11508Z Brassica rapa HOM05D003400 ORTHO05D003687 2.1e-06 57.4 176 29.5
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 2.1e-06 57.4 187 27.3
Actinidia07793 Actinidia chinensis HOM05D003400 ORTHO05D003687 2.7e-06 57.0 171 30.4
Duzib106G2049 Durio zibethinus HOM05D003400 ORTHO05D003687 2.7e-06 57.0 214 26.2
Aqoxy4G02422 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 3.6e-06 56.6 197 28.9
BcaC03g13153 Brassica carinata HOM05D003400 ORTHO05D003687 3.6e-06 56.6 172 29.1
Glyma.17G191500 Glycine max HOM05D003400 ORTHO05D003687 3.6e-06 56.6 227 30.0
Gohir.D04G012500 Gossypium hirsutum HOM05D003400 ORTHO05D003687 3.6e-06 56.6 260 28.1
Prupe.2G264100 Prunus persica HOM05D003400 ORTHO05D003687 3.6e-06 56.6 240 25.8
Gorai.012G014800 Gossypium raimondii HOM05D003400 ORTHO05D003687 4.7e-06 56.2 260 28.1
SalBow3G2848 Salvia bowleyana HOM05D003400 ORTHO05D003687 4.7e-06 56.2 227 28.6
PGSC0003DMG400016640 Solanum tuberosum HOM05D003400 ORTHO05D003687 4.7e-06 56.2 289 27.7
Gohir.A05G403000 Gossypium hirsutum HOM05D003400 ORTHO05D003687 6.1e-06 55.8 261 27.2
vmacro06891 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 6.1e-06 55.8 207 30.0
arahy.Tifrunner.gnm1.ann1.45IBUQ Arachis hypogaea HOM05D003400 ORTHO05D003687 8.0e-06 55.5 109 33.0
arahy.Tifrunner.gnm1.ann1.JMN63H Arachis hypogaea HOM05D003400 ORTHO05D003687 8.0e-06 55.5 109 33.0
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 8.0e-06 55.5 87 34.5
DCAR_020152 Daucus carota HOM05D003400 ORTHO05D003687 8.0e-06 55.5 206 27.2
Duzib114G0186 Durio zibethinus HOM05D003400 ORTHO05D003687 8.0e-06 55.5 252 26.2
VMungo0647G2516 Vigna mungo HOM05D003400 ORTHO05D003687 8.0e-06 55.5 221 28.5
Zm00001eb209040 Zea mays HOM05D003400 ORTHO05D003687 8.0e-06 55.5 103 35.0


User provided reference genes

Program Settings