Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 7.2e-33 143.3 70 100.0
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.6e-24 115.5 70 75.7
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 2.1e-24 115.2 70 75.7
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 4.7e-24 114.0 70 74.3
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.0e-23 112.8 70 72.9
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.0e-23 112.8 70 72.9
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.8e-23 112.1 70 74.3
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.3e-23 111.7 70 74.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.9e-23 110.9 70 72.9
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.1e-23 110.5 69 72.5
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 6.7e-23 110.2 70 71.4
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.7e-23 110.2 71 71.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 8.8e-23 109.8 73 72.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.1e-22 109.4 70 71.4
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.5e-22 109.0 69 72.5
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 2.0e-22 108.6 69 72.5
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 2.0e-22 108.6 69 73.9
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 2.6e-22 108.2 70 70.0
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.6e-22 108.2 70 71.4
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.6e-22 108.2 70 70.0
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.6e-22 108.2 70 70.0
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.6e-22 108.2 71 71.8
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 2.6e-22 108.2 70 70.0
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 3.3e-22 107.8 70 70.0
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 3.3e-22 107.8 70 68.6
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 70.0
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 70.0
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 70.0
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.4e-22 107.5 69 71.0
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.4e-22 107.5 69 71.0
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 4.4e-22 107.5 69 71.0
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 70.0
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 4.4e-22 107.5 69 71.0
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 68.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 4.4e-22 107.5 70 70.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 5.7e-22 107.1 70 70.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 5.7e-22 107.1 70 68.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 5.7e-22 107.1 70 68.6
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 5.7e-22 107.1 69 71.0
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 7.4e-22 106.7 71 70.4
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 7.4e-22 106.7 70 67.1
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 9.7e-22 106.3 70 70.0
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 9.7e-22 106.3 70 68.6
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 9.7e-22 106.3 70 67.1
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 9.7e-22 106.3 70 68.6
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 9.7e-22 106.3 70 68.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.3e-21 105.9 70 68.6
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.3e-21 105.9 71 69.0
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 1.3e-21 105.9 70 67.1
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 1.7e-21 105.5 62 75.8
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 1.7e-21 105.5 70 67.1
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.7e-21 105.5 70 67.1
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 2.2e-21 105.1 70 67.1
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 2.2e-21 105.1 71 69.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.8e-21 104.8 70 64.3
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.8e-21 104.8 72 66.7
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 2.8e-21 104.8 69 68.1
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.8e-21 104.8 62 72.6
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 2.8e-21 104.8 68 67.6
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 2.8e-21 104.8 70 67.1
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 3.7e-21 104.4 71 69.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.8e-21 104.0 70 67.1
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.8e-21 104.0 70 67.1
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 4.8e-21 104.0 71 69.0
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 6.3e-21 103.6 70 65.7
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 6.3e-21 103.6 70 67.1
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 6.3e-21 103.6 68 69.1
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 6.3e-21 103.6 68 66.2
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 6.3e-21 103.6 70 67.1
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 6.3e-21 103.6 68 66.2
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 8.2e-21 103.2 70 65.7
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.1e-20 102.8 72 66.7
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.4e-20 102.4 70 68.6
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.8e-20 102.1 69 69.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 2.4e-20 101.7 70 67.1
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 3.1e-20 101.3 70 62.9
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 3.1e-20 101.3 71 66.2
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.1e-20 100.9 70 64.3
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.9e-20 100.1 72 63.9
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 9.1e-20 99.8 70 62.9
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 9.1e-20 99.8 66 69.7
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.6e-19 98.2 66 66.7
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 5.9e-19 97.1 57 70.2
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.5e-18 93.6 70 57.1
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 8.5e-18 93.2 70 61.4
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 2.7e-16 88.2 113 43.4
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.1e-16 87.0 70 58.6
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.0e-15 84.7 47 76.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 6.7e-15 83.6 47 74.5
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.1e-14 82.8 68 54.4
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 8.2e-13 76.6 70 51.4
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 7.2e-09 63.5 57 52.6
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 3.3e-06 54.7 69 39.1


User provided reference genes

Program Settings