Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 2.0e-83 312.4 157 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 5.2e-23 111.7 128 53.1
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.7e-18 96.7 152 41.4
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 4.7e-16 88.6 139 43.9
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 1.4e-15 87.0 156 41.0
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 6.8e-15 84.7 135 44.4
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.2e-13 79.7 156 39.1
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.2e-13 79.7 135 40.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.4e-12 77.0 135 40.7
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 2.4e-12 76.3 138 40.6
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 2.4e-12 76.3 121 46.3
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 2.4e-12 76.3 137 38.0
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 3.1e-12 75.9 135 43.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.6e-11 73.6 135 42.2
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 4.5e-11 72.0 147 40.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 7.8e-11 71.2 146 39.0
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 2.9e-10 69.3 169 37.9
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 6.6e-10 68.2 134 39.6
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 8.6e-10 67.8 151 36.4
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 8.6e-10 67.8 133 40.6
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.1e-09 67.4 135 40.7
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.1e-09 67.4 136 39.0
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.9e-09 66.6 140 38.6
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 2.5e-09 66.2 137 39.4
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 2.5e-09 66.2 117 40.2
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 2.5e-09 66.2 103 42.7
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.3e-09 65.9 138 39.1
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.6e-09 65.1 125 42.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 5.6e-09 65.1 143 40.6
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 5.6e-09 65.1 158 36.7
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 5.6e-09 65.1 127 41.7
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 7.3e-09 64.7 131 41.2
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 7.3e-09 64.7 140 38.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 7.3e-09 64.7 141 37.6
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 9.5e-09 64.3 143 39.9
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.2e-08 63.9 121 37.2
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 1.2e-08 63.9 153 37.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.1e-08 63.2 127 40.9
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 2.1e-08 63.2 100 41.0
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 2.1e-08 63.2 135 38.5
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 3.6e-08 62.4 157 32.5
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 4.7e-08 62.0 155 38.1
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 6.1e-08 61.6 138 39.1
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 8.0e-08 61.2 141 35.5
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 8.0e-08 61.2 124 41.1
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 1.0e-07 60.8 139 34.5
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 1.0e-07 60.8 139 34.5
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.0e-07 60.8 132 37.1
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-07 60.8 148 34.5
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.4e-07 60.5 158 32.9
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.4e-07 60.5 122 35.2
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.4e-07 60.5 148 34.5
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.4e-07 60.5 144 40.3
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.4e-07 60.5 144 35.4
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.4e-07 60.5 144 31.9
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.4e-07 60.5 71 49.3
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 1.8e-07 60.1 118 35.6
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.8e-07 60.1 145 34.5
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.3e-07 59.7 142 35.9
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 2.3e-07 59.7 138 36.2
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.3e-07 59.7 155 35.5
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.3e-07 59.7 144 31.9
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 2.3e-07 59.7 55 56.4
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.3e-07 59.7 100 41.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 3.0e-07 59.3 115 37.4
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 3.0e-07 59.3 143 36.4
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.0e-07 59.3 156 30.8
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 3.0e-07 59.3 155 35.5
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 3.0e-07 59.3 147 32.7
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 5.2e-07 58.5 116 34.5
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 5.2e-07 58.5 62 53.2
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 5.2e-07 58.5 144 36.8
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 5.2e-07 58.5 141 38.3
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 5.2e-07 58.5 135 38.5
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 6.8e-07 58.2 135 33.3
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.8e-07 58.2 121 36.4
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.9e-07 57.8 138 39.1
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 8.9e-07 57.8 133 39.8
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 8.9e-07 57.8 142 33.1
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 8.9e-07 57.8 75 46.7
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 8.9e-07 57.8 99 42.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.2e-06 57.4 153 33.3
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-06 57.0 50 56.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.5e-06 57.0 163 33.7
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.5e-06 57.0 148 35.1
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.5e-06 57.0 73 43.8
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.0e-06 56.6 66 48.5
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.0e-06 56.6 135 37.8
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 2.0e-06 56.6 109 36.7
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 2.6e-06 56.2 65 49.2
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 2.6e-06 56.2 136 36.0
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 3.4e-06 55.8 114 36.8
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 4.4e-06 55.5 123 37.4
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 5.8e-06 55.1 116 37.1
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 5.8e-06 55.1 47 55.3
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 5.8e-06 55.1 138 37.7
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 7.5e-06 54.7 49 57.1
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 9.8e-06 54.3 148 33.8
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 9.8e-06 54.3 123 37.4


User provided reference genes

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