Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 6.8e-262 906.7 446 100.0
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.8e-161 573.2 380 71.3
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 2.2e-159 566.2 389 70.2
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.3e-153 546.2 380 68.2
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 7.3e-147 524.6 369 66.1
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.8e-146 522.7 386 63.2
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.8e-146 522.7 371 65.5
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.4e-145 520.4 376 64.9
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 4.0e-145 518.8 380 63.9
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.5e-144 516.9 380 64.2
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 5.8e-144 515.0 377 65.0
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 5.8e-144 515.0 380 64.2
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.8e-144 514.2 380 63.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 9.8e-144 514.2 371 64.7
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 3.7e-143 512.3 415 59.5
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 6.4e-143 511.5 381 63.3
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 6.4e-143 511.5 371 64.4
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 1.4e-142 510.4 395 61.0
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.4e-142 510.4 372 64.8
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.4e-142 510.4 372 64.5
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 3.2e-142 509.2 380 63.2
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 3.2e-142 509.2 388 61.6
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 4.1e-142 508.8 380 62.1
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.1e-142 508.8 385 63.4
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.6e-141 506.9 374 65.2
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 4.6e-141 505.4 374 65.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 4.6e-141 505.4 384 62.0
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 4.6e-141 505.4 381 61.7
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.0e-141 505.0 371 64.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.8e-141 504.6 380 62.6
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 7.8e-141 504.6 378 63.2
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 7.8e-141 504.6 371 64.7
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.0e-140 504.2 371 63.3
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.0e-140 504.2 371 63.9
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 1.0e-140 504.2 370 64.6
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.0e-140 504.2 388 60.6
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.0e-140 504.2 372 64.2
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.3e-140 503.8 374 65.0
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.3e-140 503.1 376 62.8
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 3.0e-140 502.7 371 63.1
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.0e-140 502.7 372 62.9
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 3.0e-140 502.7 371 63.3
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 3.9e-140 502.3 380 63.9
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 6.6e-140 501.5 370 63.0
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 1.1e-139 500.7 375 64.3
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.1e-139 500.7 376 63.0
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.1e-139 500.7 379 62.8
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.5e-139 500.4 380 61.6
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 2.5e-139 499.6 372 62.9
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 4.3e-139 498.8 377 63.4
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 4.3e-139 498.8 378 61.9
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 5.6e-139 498.4 378 61.9
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 5.6e-139 498.4 371 63.1
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 7.3e-139 498.0 370 64.1
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.2e-138 497.3 378 62.2
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.2e-138 497.3 378 61.9
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.2e-138 497.3 385 62.3
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.6e-138 496.9 384 62.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.6e-138 496.9 370 64.1
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.1e-138 496.5 370 64.3
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.8e-138 496.1 378 61.6
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.8e-138 496.1 372 63.4
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.8e-138 496.1 380 61.6
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 3.6e-138 495.7 380 61.8
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.6e-138 495.7 370 63.8
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.6e-138 495.7 370 63.8
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 4.7e-138 495.4 370 63.5
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.2e-138 495.0 380 60.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 8.1e-138 494.6 371 62.8
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.1e-137 494.2 384 61.2
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 1.1e-137 494.2 388 60.3
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.8e-137 493.4 378 61.4
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.8e-137 493.4 370 63.5
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.8e-137 493.4 377 62.3
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 3.1e-137 492.7 379 61.5
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 4.0e-137 492.3 371 61.7
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 8.9e-137 491.1 371 62.5
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.5e-136 490.3 384 60.7
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.5e-136 490.3 384 60.7
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 3.4e-136 489.2 379 60.9
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 7.5e-136 488.0 386 62.2
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 7.5e-136 488.0 411 58.4
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 3.7e-135 485.7 350 65.7
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 6.4e-135 485.0 412 58.0
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.2e-134 482.6 408 58.6
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 3.9e-132 475.7 373 61.1
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 6.6e-132 474.9 429 55.7
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 2.4e-129 466.5 341 62.8
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 6.2e-122 441.8 457 49.9
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 5.4e-118 428.7 399 56.1
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.6e-117 427.2 312 63.5
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.0e-113 412.5 317 61.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.9e-110 403.7 371 54.2
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 1.8e-105 387.1 380 52.4
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 5.7e-99 365.5 375 50.9
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.1e-98 363.6 363 51.2
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 6.2e-98 362.1 436 44.7
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 4.6e-93 345.9 372 47.6
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 3.9e-92 342.8 435 45.1
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 2.7e-77 293.5 218 64.7
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.0e-75 287.3 259 57.5
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.5e-72 276.2 231 59.3
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 2.6e-64 250.4 223 56.5
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.8e-60 237.7 193 59.1
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 8.8e-60 235.3 282 47.5
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 3.2e-54 216.9 155 62.6
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.2e-48 198.4 154 58.4
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 9.2e-41 172.2 210 45.2
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 5.6e-30 136.3 127 50.4
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.4e-28 131.7 121 55.4
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 3.6e-21 107.1 85 57.6
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 8.9e-20 102.4 70 65.7
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 8.4e-18 95.9 132 42.4
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.4e-17 95.1 175 36.6
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 3.5e-16 90.5 59 76.3
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 3.3e-14 84.0 59 67.8
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.7e-10 71.6 79 46.8


User provided reference genes

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