Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.4e-184 648.7 319 100.0
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 4.4e-162 574.7 314 91.7
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 5.1e-110 401.7 312 61.5
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 2.6e-106 389.4 312 59.9
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.3e-105 387.1 312 60.6
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 1.3e-94 350.5 314 56.1
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.1e-93 347.4 316 53.5
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 4.3e-93 345.5 314 54.8
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 5.7e-93 345.1 314 55.1
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 5.7e-93 345.1 308 53.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 2.8e-92 342.8 308 55.5
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 8.2e-92 341.3 310 52.3
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 8.2e-92 341.3 314 52.5
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.1e-91 340.9 316 53.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.4e-91 340.5 314 53.5
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 3.1e-91 339.3 315 53.7
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.1e-91 339.3 318 52.2
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 3.1e-91 339.3 314 54.1
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.3e-91 338.6 313 53.4
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 5.3e-91 338.6 314 52.9
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 9.0e-91 337.8 315 52.7
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.2e-90 337.4 315 52.7
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.5e-90 337.0 312 53.5
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 1.5e-90 337.0 314 53.5
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 2.0e-90 336.7 308 53.2
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.0e-90 336.7 315 53.0
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 2.6e-90 336.3 310 54.8
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 2.6e-90 336.3 308 54.5
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 3.4e-90 335.9 310 54.5
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 3.4e-90 335.9 308 54.2
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.5e-90 335.5 312 51.9
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 4.5e-90 335.5 308 53.6
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 4.5e-90 335.5 314 54.1
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 4.5e-90 335.5 314 52.2
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 5.8e-90 335.1 315 53.0
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 7.6e-90 334.7 317 53.3
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 7.6e-90 334.7 308 53.9
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.6e-90 334.7 318 52.2
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.3e-89 334.0 312 52.9
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.7e-89 333.6 315 53.0
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.7e-89 333.6 315 52.4
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.9e-89 332.8 315 52.4
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 3.8e-89 332.4 315 52.4
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.0e-89 332.0 315 52.1
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 5.0e-89 332.0 308 53.9
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.5e-89 331.6 314 52.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 8.4e-89 331.3 314 52.9
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.1e-88 330.9 315 53.3
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.1e-88 330.9 311 51.4
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.1e-88 330.9 310 54.2
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.1e-88 330.9 314 52.2
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.4e-88 330.5 315 53.7
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.4e-88 330.5 315 52.1
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 2.5e-88 329.7 308 53.2
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 2.5e-88 329.7 313 52.7
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 4.2e-88 328.9 314 52.2
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 4.2e-88 328.9 308 54.2
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 5.5e-88 328.6 314 52.2
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 9.3e-88 327.8 314 51.9
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.6e-87 327.0 308 53.6
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.7e-87 326.2 311 52.4
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 2.7e-87 326.2 315 52.7
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 4.6e-87 325.5 336 50.0
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 4.6e-87 325.5 315 52.4
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 7.9e-87 324.7 302 53.6
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 7.9e-87 324.7 311 50.8
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.0e-86 324.3 321 52.0
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 2.3e-86 323.2 326 49.7
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.3e-86 323.2 314 51.9
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.0e-86 322.8 324 51.2
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 5.1e-86 322.0 314 51.3
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 6.7e-86 321.6 308 52.9
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 8.7e-86 321.2 316 51.3
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.5e-85 320.5 293 52.9
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.5e-85 320.5 321 50.5
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.9e-85 320.1 312 52.2
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 4.3e-85 318.9 314 51.0
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 4.3e-85 318.9 314 51.0
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 5.7e-85 318.5 314 50.6
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 5.7e-85 318.5 314 50.6
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 5.7e-85 318.5 314 50.6
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 5.7e-85 318.5 310 50.6
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.2e-84 316.6 314 50.6
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.2e-84 316.6 314 50.6
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.2e-84 316.6 314 51.0
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.8e-84 315.5 314 49.0
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 4.8e-84 315.5 315 50.5
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.3e-84 315.1 314 49.0
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 8.2e-84 314.7 321 50.8
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 8.2e-84 314.7 314 49.0
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 8.2e-84 314.7 278 56.1
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.1e-83 314.3 277 56.7
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.1e-83 314.3 308 52.3
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 6.9e-83 311.6 282 55.3
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 4.5e-82 308.9 317 50.2
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 4.5e-82 308.9 314 51.0
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 5.0e-81 305.4 300 51.0
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 6.5e-81 305.1 332 48.8
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.1e-80 304.3 295 52.2
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.4e-80 303.9 316 50.0
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 7.4e-77 291.6 292 50.7
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 4.8e-76 288.9 252 57.1
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.1e-75 287.7 374 43.6
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.0e-74 283.5 340 45.3
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 3.8e-73 279.3 315 47.6
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 8.5e-73 278.1 316 46.2
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 8.8e-70 268.1 313 47.0
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 8.2e-68 261.5 282 49.6
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 1.4e-67 260.8 328 43.3
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 7.0e-67 258.5 268 50.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 1.1e-64 251.1 315 44.1
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 4.0e-62 242.7 217 55.3
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 9.7e-61 238.0 331 40.8
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.2e-45 188.0 168 56.0
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.6e-45 186.8 129 65.9
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 3.4e-37 159.8 308 33.1
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.6e-34 151.0 196 40.3
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 3.0e-25 120.2 164 38.4
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.0e-14 83.2 99 40.4
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.7e-12 77.8 109 43.1
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-10 69.7 193 29.0
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 1.5e-08 64.7 55 52.7


User provided reference genes

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