Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0808 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.7e-174 615.9 310 100.0
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 4.5e-95 352.1 275 73.5
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.9e-94 349.4 275 73.8
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 1.6e-47 194.1 246 50.4
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 1.0e-46 191.4 295 41.4
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 2.1e-44 183.7 246 47.6
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 6.2e-44 182.2 260 46.2
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 2.3e-43 180.3 260 44.6
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 3.1e-43 179.9 253 43.1
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 5.2e-43 179.1 275 40.4
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.2e-42 177.9 253 42.7
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 1.5e-42 177.6 277 40.8
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 2.0e-42 177.2 280 40.0
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 2.6e-42 176.8 253 42.3
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 3.4e-42 176.4 253 42.3
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 3.4e-42 176.4 253 42.3
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 3.4e-42 176.4 270 40.0
HPP92_020312 Vanilla planifolia HOM05D004589 ORTHO05D005848 5.8e-42 175.6 260 40.0
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 7.5e-42 175.3 268 41.4
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 1.3e-41 174.5 290 37.9
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 1.3e-41 174.5 255 41.2
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 1.7e-41 174.1 268 39.9
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 1.7e-41 174.1 268 39.9
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 2.9e-41 173.3 271 40.6
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 3.7e-41 172.9 253 41.1
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 3.7e-41 172.9 303 38.3
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 4.9e-41 172.6 270 41.1
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 4.9e-41 172.6 275 40.0
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 6.4e-41 172.2 270 40.4
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 8.3e-41 171.8 305 38.0
Gohir.D07G034300 Gossypium hirsutum HOM05D004589 ORTHO05D005848 8.3e-41 171.8 271 39.9
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 8.3e-41 171.8 271 39.9
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 1.1e-40 171.4 270 40.4
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 1.1e-40 171.4 271 39.9
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 1.1e-40 171.4 277 39.4
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 1.4e-40 171.0 251 42.2
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 1.4e-40 171.0 270 40.0
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 1.4e-40 171.0 252 43.7
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.4e-40 171.0 274 40.1
HPP92_024789 Vanilla planifolia HOM05D004589 ORTHO05D005848 1.4e-40 171.0 233 43.8
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 1.9e-40 170.6 292 39.7
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.9e-40 170.6 268 41.0
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 1.9e-40 170.6 267 40.1
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.9e-40 170.6 276 38.8
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 2.4e-40 170.2 272 41.2
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 2.4e-40 170.2 256 42.6
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 2.4e-40 170.2 256 41.8
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 3.2e-40 169.9 271 40.2
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 4.1e-40 169.5 270 40.0
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 4.1e-40 169.5 270 40.0
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 4.1e-40 169.5 295 36.6
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.1e-40 169.5 295 36.6
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 4.1e-40 169.5 276 39.1
Actinidia14103 Actinidia chinensis HOM05D004589 ORTHO05D005848 5.4e-40 169.1 270 40.0
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 7.0e-40 168.7 253 40.7
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 7.0e-40 168.7 298 37.6
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 7.0e-40 168.7 256 40.6
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 7.0e-40 168.7 276 39.1
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 7.0e-40 168.7 251 42.2
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 9.2e-40 168.3 267 40.1
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 9.2e-40 168.3 256 42.2
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 9.2e-40 168.3 256 42.2
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 9.2e-40 168.3 271 39.5
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 1.6e-39 167.5 277 38.3
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.6e-39 167.5 256 40.2
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 1.6e-39 167.5 294 37.1
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.1e-39 167.2 276 38.4
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 2.1e-39 167.2 267 39.7
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 2.7e-39 166.8 270 38.1
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.7e-39 166.8 270 38.1
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 2.7e-39 166.8 251 42.2
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 2.7e-39 166.8 275 38.2
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 2.7e-39 166.8 270 39.3
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 2.7e-39 166.8 270 40.0
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 2.7e-39 166.8 256 40.2
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 2.7e-39 166.8 256 40.2
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 3.5e-39 166.4 291 37.5
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 3.5e-39 166.4 275 38.2
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 4.6e-39 166.0 256 39.8
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.0e-39 165.6 253 40.7
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 6.0e-39 165.6 274 39.4
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 7.8e-39 165.2 251 41.8
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 7.8e-39 165.2 275 39.3
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 1.7e-38 164.1 267 39.3
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 2.3e-38 163.7 270 38.1
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 3.9e-38 162.9 270 38.5
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 6.6e-38 162.2 268 37.7
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 8.6e-38 161.8 305 36.4
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 8.6e-38 161.8 253 39.5
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 8.6e-38 161.8 252 38.5
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 1.1e-37 161.4 256 40.2
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 1.5e-37 161.0 282 38.3
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.5e-37 160.2 253 39.5
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 5.6e-37 159.1 268 37.7
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.8e-36 156.8 239 41.0
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 2.8e-36 156.8 239 41.0
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 4.7e-36 156.0 255 40.4
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 1.1e-35 154.8 269 36.1
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 5.2e-35 152.5 258 39.5
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 5.2e-35 152.5 282 35.5
unitig_32.g11112 Utricularia gibba HOM05D004589 ORTHO05D005848 5.2e-35 152.5 283 35.7
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 2.0e-34 150.6 268 37.3
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 4.4e-34 149.4 274 35.8
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 9.9e-34 148.3 261 39.1
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 1.7e-33 147.5 217 38.7
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.7e-33 146.4 246 39.8
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 6.4e-33 145.6 192 43.8
SEGI_04045 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 2.7e-31 140.2 148 52.7
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 3.5e-31 139.8 339 32.4
Cpa.g.sc187.29 Carica papaya HOM05D004589 ORTHO05D005848 4.3e-29 132.9 148 50.7
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 8.9e-27 125.2 202 37.6
TPR.G38939 Trifolium pratense HOM05D004589 ORTHO05D005848 8.9e-27 125.2 146 48.6
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 1.5e-26 124.4 148 45.9
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 1.7e-25 120.9 202 37.1
Hma1.2p1_0167F.1_g073630 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 3.9e-22 109.8 122 48.4
Zm00001eb426000 Zea mays HOM05D004589 ORTHO05D005848 8.7e-22 108.6 135 48.9
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 4.3e-13 79.7 116 39.7
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 9.9e-10 68.6 180 27.8
TPR.G40835 Trifolium pratense HOM05D004589 ORTHO05D005848 7.1e-08 62.4 93 36.6
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 2.7e-07 60.5 78 41.0


User provided reference genes

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