Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0763 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 7.0e-132 474.2 278 100.0
SMO172G0031 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 2.8e-32 143.3 111 64.0
Pp3c6_9830 Physcomitrium patens HOM05D004056 ORTHO05D004894 1.6e-30 137.5 105 64.8
HPP92_006215 Vanilla planifolia HOM05D004056 ORTHO05D004894 1.0e-29 134.8 113 60.2
DCAR_012671 Daucus carota HOM05D004056 ORTHO05D004894 2.3e-29 133.7 111 61.3
Gohir.A07G160800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.9e-29 133.3 144 50.0
Gorai.001G188300 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.9e-29 133.3 144 50.0
PSO063G1373 Papaver somniferum HOM05D004056 ORTHO05D004894 2.9e-29 133.3 108 59.3
GSVIVG01003250001 Vitis vinifera HOM05D004056 ORTHO05D004894 2.9e-29 133.3 114 58.8
Duzib211G0551 Durio zibethinus HOM05D004056 ORTHO05D004894 3.8e-29 132.9 139 51.1
Dinv00576 Davidia involucrata HOM05D004056 ORTHO05D004894 6.6e-29 132.1 145 48.3
MD05G1171400 Malus domestica HOM05D004056 ORTHO05D004894 8.6e-29 131.7 138 52.2
MD10G1159600 Malus domestica HOM05D004056 ORTHO05D004894 8.6e-29 131.7 113 58.4
ATR0561G205 Amborella trichopoda HOM05D004056 ORTHO05D004894 1.1e-28 131.3 148 49.3
Gohir.D11G145800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.5e-28 131.0 131 52.7
Gorai.007G156300 Gossypium raimondii HOM05D004056 ORTHO05D004894 1.5e-28 131.0 131 52.7
Gohir.D07G164400 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.9e-28 130.6 144 48.6
MBI07_g18993_MAGBIO Magnolia biondii HOM05D004056 ORTHO05D004894 1.9e-28 130.6 107 60.7
Peaxi162Scf00068g00224 Petunia axillaris HOM05D004056 ORTHO05D004894 1.9e-28 130.6 139 51.1
Thecc.01G219700 Theobroma cacao HOM05D004056 ORTHO05D004894 1.9e-28 130.6 135 51.9
CAN.G5.40 Capsicum annuum HOM05D004056 ORTHO05D004894 2.5e-28 130.2 147 48.3
COL.COLO4_34102 Corchorus olitorius HOM05D004056 ORTHO05D004894 2.5e-28 130.2 145 49.0
Nitab4.5_0001161g0130 Nicotiana tabacum HOM05D004056 ORTHO05D004894 2.5e-28 130.2 142 51.4
HPP92_024244 Vanilla planifolia HOM05D004056 ORTHO05D004894 2.5e-28 130.2 103 62.1
Duzib138G1417 Durio zibethinus HOM05D004056 ORTHO05D004894 3.3e-28 129.8 133 51.1
Pp3c5_19550 Physcomitrium patens HOM05D004056 ORTHO05D004894 3.3e-28 129.8 105 61.9
TWI36G0821 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 4.2e-28 129.4 135 54.1
Aqoxy5G00024 Aquilegia oxysepala HOM05D004056 ORTHO05D004894 5.5e-28 129.0 144 50.0
Prupe.8G198700 Prunus persica HOM05D004056 ORTHO05D004894 5.5e-28 129.0 142 50.7
Solyc09g059510.3 Solanum lycopersicum HOM05D004056 ORTHO05D004894 5.5e-28 129.0 149 50.3
PGSC0003DMG400017485 Solanum tuberosum HOM05D004056 ORTHO05D004894 5.5e-28 129.0 145 51.0
Gohir.A11G139600 Gossypium hirsutum HOM05D004056 ORTHO05D004894 7.2e-28 128.6 131 51.9
Rhsim13G0047900 Rhododendron simsii HOM05D004056 ORTHO05D004894 7.2e-28 128.6 141 48.9
SalBow6G2821 Salvia bowleyana HOM05D004056 ORTHO05D004894 7.2e-28 128.6 139 50.4
SalBow6G5583 Salvia bowleyana HOM05D004056 ORTHO05D004894 7.2e-28 128.6 139 50.4
vmacro14736 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 7.2e-28 128.6 135 51.9
MELO3C022718.2 Cucumis melo HOM05D004056 ORTHO05D004894 9.5e-28 128.3 105 58.1
Sabra02G0187400 Salix brachista HOM05D004056 ORTHO05D004894 9.5e-28 128.3 138 49.3
TWI18G1219 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 9.5e-28 128.3 141 52.5
TAR633G1317 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.2e-27 127.9 135 50.4
Actinidia39428 Actinidia chinensis HOM05D004056 ORTHO05D004894 1.6e-27 127.5 146 50.0
CDE02G4431 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 1.6e-27 127.5 139 51.1
Os02g0499000 Oryza sativa ssp. japonica HOM05D004056 ORTHO05D004894 1.6e-27 127.5 103 61.2
PSO017G4055 Papaver somniferum HOM05D004056 ORTHO05D004894 1.6e-27 127.5 109 58.7
Sed0007046 Sechium edule HOM05D004056 ORTHO05D004894 1.6e-27 127.5 105 58.1
MSTRG.20969 Avicennia marina HOM05D004056 ORTHO05D004894 2.1e-27 127.1 112 57.1
Cpa.g.sc21.106 Carica papaya HOM05D004056 ORTHO05D004894 2.1e-27 127.1 114 57.0
CDE09G0677 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 2.1e-27 127.1 121 55.4
Dinv19168 Davidia involucrata HOM05D004056 ORTHO05D004894 2.1e-27 127.1 130 50.0
Gohir.A07G093100 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.1e-27 127.1 134 50.0
Gohir.A07G198800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.1e-27 127.1 123 54.5
Gohir.D07G097700 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.1e-27 127.1 134 50.0
Gorai.001G105100 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.1e-27 127.1 134 50.0
Lj1A89T71 Lonicera japonica HOM05D004056 ORTHO05D004894 2.1e-27 127.1 136 52.2
QL09p051117 Quercus lobata HOM05D004056 ORTHO05D004894 2.1e-27 127.1 113 56.6
Rhsim01G0253300 Rhododendron simsii HOM05D004056 ORTHO05D004894 2.1e-27 127.1 125 54.4
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 2.8e-27 126.7 102 60.8
Gohir.D07G205300 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.8e-27 126.7 123 54.5
Gorai.001G231300 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.8e-27 126.7 123 54.5
Hma1.2p1_0226F.1_g095370 Hydrangea macrophylla HOM05D004056 ORTHO05D004894 2.8e-27 126.7 136 49.3
Oeu051533.1 Olea europaea HOM05D004056 ORTHO05D004894 2.8e-27 126.7 104 61.5
Oeu057860.1 Olea europaea HOM05D004056 ORTHO05D004894 2.8e-27 126.7 132 53.8
CsaV3_3G030040 Cucumis sativus L. HOM05D004056 ORTHO05D004894 3.6e-27 126.3 102 58.8
FvH4_2g18520 Fragaria vesca HOM05D004056 ORTHO05D004894 3.6e-27 126.3 102 60.8
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.6e-27 126.3 102 60.8
FAN27G1039 Fragaria x ananassa HOM05D004056 ORTHO05D004894 3.6e-27 126.3 102 60.8
Manes.12G047500 Manihot esculenta HOM05D004056 ORTHO05D004894 3.6e-27 126.3 113 55.8
Nn1g07984 Nelumbo nucifera HOM05D004056 ORTHO05D004894 3.6e-27 126.3 148 50.0
Nitab4.5_0000045g0550 Nicotiana tabacum HOM05D004056 ORTHO05D004894 3.6e-27 126.3 135 49.6
RcHm_v2.0_Chr6g0284081 Rosa chinensis HOM05D004056 ORTHO05D004894 3.6e-27 126.3 102 60.8
MSTRG.18836 Avicennia marina HOM05D004056 ORTHO05D004894 4.7e-27 125.9 111 56.8
Dinv12647 Davidia involucrata HOM05D004056 ORTHO05D004894 4.7e-27 125.9 143 47.6
Duzib133G0422 Durio zibethinus HOM05D004056 ORTHO05D004894 4.7e-27 125.9 154 46.1
Potri.002G246100 Populus trichocarpa HOM05D004056 ORTHO05D004894 4.7e-27 125.9 140 48.6
unitig_26.g9438 Utricularia gibba HOM05D004056 ORTHO05D004894 4.7e-27 125.9 104 60.6
Atru.chr6.1427 Acer truncatum HOM05D004056 ORTHO05D004894 6.1e-27 125.6 104 59.6
Actinidia30050 Actinidia chinensis HOM05D004056 ORTHO05D004894 6.1e-27 125.6 139 50.4
vmacro02784 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 6.1e-27 125.6 146 49.3
VMungo1383G1286 Vigna mungo HOM05D004056 ORTHO05D004894 6.1e-27 125.6 104 60.6
AT4G13040 Arabidopsis thaliana HOM05D004056 ORTHO05D004894 8.0e-27 125.2 109 58.7
arahy.Tifrunner.gnm1.ann1.2MPX2Y Arachis hypogaea HOM05D004056 ORTHO05D004894 8.0e-27 125.2 104 60.6
ClCG07G002100 Citrullus lanatus HOM05D004056 ORTHO05D004894 8.0e-27 125.2 105 58.1
CARHR218370 Cardamine hirsuta HOM05D004056 ORTHO05D004894 1.0e-26 124.8 105 58.1
Cc01_g16690 Coffea canephora HOM05D004056 ORTHO05D004894 1.0e-26 124.8 114 56.1
MD10G1039600 Malus domestica HOM05D001916 ORTHO05D004894 1.0e-26 124.8 113 55.8
THA.LOC104804624 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 1.0e-26 124.8 122 54.9
TAR365G1100 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.0e-26 124.8 107 59.8
TAR636G0170 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.0e-26 124.8 137 50.4
AUR62016545 Chenopodium quinoa HOM05D004056 ORTHO05D004894 1.4e-26 124.4 108 56.5
Glyma.18G159900 Glycine max HOM05D004056 ORTHO05D004894 1.4e-26 124.4 105 57.1
BcaB04g17724 Brassica carinata HOM05D004056 ORTHO05D004894 1.8e-26 124.0 107 56.1
HanXRQChr04g0108001 Helianthus annuus HOM05D004056 ORTHO05D004894 1.8e-26 124.0 116 55.2
Cfa004161 Carpinus fangiana HOM05D004056 ORTHO05D004894 2.3e-26 123.6 126 52.4
Haze_15250 Corylus avellana HOM05D004056 ORTHO05D004894 2.3e-26 123.6 126 52.4
Eucgr.K02136 Eucalyptus grandis HOM05D004056 ORTHO05D004894 2.3e-26 123.6 138 50.0
Sp7g10210 Schrenkiella parvula HOM05D004056 ORTHO05D004894 2.3e-26 123.6 112 55.4
TPR.G6483 Trifolium pratense HOM05D004056 ORTHO05D004894 2.3e-26 123.6 84 65.5
CiPaw.01G050800 Carya illinoinensis HOM05D004056 ORTHO05D004894 3.0e-26 123.2 113 55.8
Lsat_1_v5_gn_8_89300 Lactuca sativa HOM05D004056 ORTHO05D004894 3.0e-26 123.2 138 48.6
Lj1g0006098 Lotus japonicus HOM05D004056 ORTHO05D004894 3.0e-26 123.2 96 61.5
Phvul.008G131500 Phaseolus vulgaris HOM05D004056 ORTHO05D004894 3.0e-26 123.2 126 53.2
SGA_v2.0_scaffold18G08335 Striga asiatica HOM05D004056 ORTHO05D004894 3.0e-26 123.2 135 49.6
EL10Ac7g17907 Beta vulgaris HOM05D004056 ORTHO05D004894 4.0e-26 122.9 105 58.1
ClCG09G008620 Citrullus lanatus HOM05D004056 ORTHO05D004894 4.0e-26 122.9 99 60.6
Migut.D02503 Erythranthe guttata HOM05D004056 ORTHO05D004894 4.0e-26 122.9 128 54.7
Lalb_Chr19g0125861 Lupinus albus HOM05D004056 ORTHO05D004894 4.0e-26 122.9 106 56.6
Medtr7g055857 Medicago truncatula HOM05D004056 ORTHO05D004894 4.0e-26 122.9 106 54.7
Hund05580 Selenicereus undatus HOM05D004056 ORTHO05D004894 4.0e-26 122.9 84 67.9
Aa31LG9G5020 Aethionema arabicum HOM05D004056 ORTHO05D004894 5.2e-26 122.5 111 54.1
AL9U11310 Arabidopsis lyrata HOM05D004056 ORTHO05D004894 5.2e-26 122.5 116 55.2
C08p08780 Brassica napus HOM05D004056 ORTHO05D004894 5.2e-26 122.5 103 57.3
BraA08t32730Z Brassica rapa HOM05D004056 ORTHO05D004894 5.2e-26 122.5 103 57.3
CANSAT01G2574 Cannabis sativa HOM05D004056 ORTHO05D004894 5.2e-26 122.5 139 48.9
Manes.13G049600 Manihot esculenta HOM05D004056 ORTHO05D004894 5.2e-26 122.5 102 58.8
VMungo0331G1907 Vigna mungo HOM05D004056 ORTHO05D004894 5.2e-26 122.5 127 50.4
CiPaw.02G023900 Carya illinoinensis HOM05D004056 ORTHO05D004894 6.8e-26 122.1 151 45.7
AUR62001134 Chenopodium quinoa HOM05D004056 ORTHO05D004894 6.8e-26 122.1 105 57.1
CsaV3_7G026330 Cucumis sativus L. HOM05D004056 ORTHO05D004894 6.8e-26 122.1 99 59.6
Lj3g0018087 Lotus japonicus HOM05D004056 ORTHO05D004894 6.8e-26 122.1 127 54.3
Sc17g0002100 Simmondsia chinensis HOM05D004056 ORTHO05D004894 6.8e-26 122.1 144 47.9
arahy.Tifrunner.gnm1.ann1.8LB9ZD Arachis hypogaea HOM05D004056 ORTHO05D004894 8.9e-26 121.7 101 61.4
C08p08770 Brassica napus HOM05D004056 ORTHO05D004894 8.9e-26 121.7 89 62.9
BolC8t47724H Brassica oleracea HOM05D004056 ORTHO05D004894 8.9e-26 121.7 89 62.9
Thhalv10026242m.g Eutrema salsugineum HOM05D004056 ORTHO05D004894 8.9e-26 121.7 142 51.4
Lsat_1_v5_gn_5_180841 Lactuca sativa HOM05D004056 ORTHO05D004894 8.9e-26 121.7 123 51.2
BcaC07g37403 Brassica carinata HOM05D004056 ORTHO05D004894 1.2e-25 121.3 103 56.3
BolC8t47725H Brassica oleracea HOM05D004056 ORTHO05D004894 1.2e-25 121.3 103 56.3
MSTRG.12776 Avicennia marina HOM05D004056 ORTHO05D004894 1.5e-25 120.9 104 56.7
Ca_03473_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 1.5e-25 120.9 86 64.0
DCAR_018636 Daucus carota HOM05D004056 ORTHO05D004894 1.5e-25 120.9 116 54.3
Glyma.08G348300 Glycine max HOM05D004056 ORTHO05D004894 2.0e-25 120.6 85 63.5
PGR044G2021 Punica granatum HOM05D004056 ORTHO05D004894 2.0e-25 120.6 83 68.7
TAR362G0687 Trochodendron aralioides HOM05D004056 ORTHO05D004894 2.0e-25 120.6 99 60.6
Ciclev10021891m.g Citrus clementina HOM05D004056 ORTHO05D004894 2.6e-25 120.2 139 50.4
unitig_736.g22344 Utricularia gibba HOM05D004056 ORTHO05D004894 2.6e-25 120.2 133 48.9
Hund18433 Selenicereus undatus HOM05D004056 ORTHO05D004894 3.4e-25 119.8 99 58.6
Medtr8g012655 Medicago truncatula HOM05D004056 ORTHO05D004894 4.4e-25 119.4 126 50.8
Psat3g149240 Pisum sativum HOM05D004056 ORTHO05D004894 5.7e-25 119.0 129 48.8
Sed0002122 Sechium edule HOM05D004056 ORTHO05D004894 5.7e-25 119.0 99 57.6
unitig_899.g15016 Utricularia gibba HOM05D004056 ORTHO05D004894 5.7e-25 119.0 153 48.4
Migut.N00633 Erythranthe guttata HOM05D004056 ORTHO05D004894 7.5e-25 118.6 114 52.6
HanXRQChr01g0015301 Helianthus annuus HOM05D004056 ORTHO05D004894 7.5e-25 118.6 132 47.0
Sed0026975 Sechium edule HOM05D004056 ORTHO05D004894 7.5e-25 118.6 99 57.6
unitig_699.g19750 Utricularia gibba HOM05D004056 ORTHO05D004894 1.7e-24 117.5 140 48.6
Zm00001eb241420 Zea mays HOM05D004056 ORTHO05D004894 1.7e-24 117.5 132 50.0
ECA236G1380 Erigeron canadensis HOM05D004056 ORTHO05D004894 3.7e-24 116.3 96 56.2
Sopen09g022670 Solanum pennellii HOM05D004056 ORTHO05D004894 4.9e-24 115.9 154 46.1
ECA248G0601 Erigeron canadensis HOM05D004056 ORTHO05D004894 8.3e-24 115.2 141 42.6
TPR.G11183 Trifolium pratense HOM05D004056 ORTHO05D004894 1.1e-23 114.8 140 45.7
A08p07180 Brassica napus HOM05D004056 ORTHO05D004894 1.4e-23 114.4 95 56.8
Ca_23224_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 1.4e-23 114.4 137 45.3
Ah.08g214620 Amaranthus hybridus HOM05D004056 ORTHO05D004894 2.0e-22 110.5 107 54.2
unitig_749.g13591 Utricularia gibba HOM05D004056 ORTHO05D004894 2.0e-22 110.5 154 43.5
MELO3C028860.2 Cucumis melo HOM05D004056 ORTHO05D004894 1.9e-20 104.0 133 44.4
HanXRQChr08g0235681 Helianthus annuus HOM05D004056 ORTHO05D004894 1.6e-19 100.9 79 58.2
THA.LOC104808796 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 1.6e-19 100.9 69 63.8
CBR_g38383 Chara braunii HOM05D004056 ORTHO05D004894 2.9e-16 90.1 72 59.7
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.2e-11 74.7 61 60.7
SGA_v2.0_scaffold6G03510 Striga asiatica HOM05D004056 ORTHO05D004894 3.6e-11 73.2 81 53.1
Pp3c13_22780 Physcomitrium patens HOM05D004056 ORTHO05D004504 1.8e-10 70.9 79 43.0
Carub.0007s2973 Capsella rubella HOM05D004056 ORTHO05D004894 2.3e-10 70.5 58 56.9
Psat4g203800 Pisum sativum HOM05D004056 ORTHO05D004894 3.1e-10 70.1 80 46.2
Pp3c4_8660 Physcomitrium patens HOM05D004056 ORTHO05D004504 7.1e-07 58.9 85 38.8
CSS0004822 Camellia sinensis var. sinensis HOM05D004056 ORTHO05D004894 1.2e-06 58.2 57 50.9


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