Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 2.8e-185 651.7 313 100.0
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 7.5e-98 361.3 314 56.1
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 9.1e-96 354.4 315 50.8
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 7.7e-95 351.3 307 53.4
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.0e-94 350.9 308 52.9
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.3e-94 350.5 309 53.7
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 2.3e-94 349.7 315 51.4
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.9e-94 349.4 309 51.5
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.8e-94 349.0 312 53.2
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 5.0e-94 348.6 312 52.6
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.0e-94 348.6 311 52.7
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.0e-94 348.6 312 52.6
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 8.6e-94 347.8 309 52.8
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.1e-93 347.4 314 51.3
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.5e-93 347.1 312 52.6
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.9e-93 346.7 308 54.5
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 2.5e-93 346.3 308 53.6
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 3.3e-93 345.9 304 54.3
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.3e-93 345.9 312 52.2
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 5.5e-93 345.1 308 51.6
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 9.5e-93 344.4 308 52.9
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 9.5e-93 344.4 311 52.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 9.5e-93 344.4 310 53.5
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 9.5e-93 344.4 312 51.9
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.2e-92 344.0 303 52.8
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.2e-92 344.0 307 53.1
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.6e-92 343.6 302 54.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-92 343.6 314 51.0
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.1e-92 343.2 311 51.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.8e-92 342.8 315 51.1
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 3.6e-92 342.4 312 51.0
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 3.6e-92 342.4 309 53.7
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 4.7e-92 342.0 308 52.6
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 6.1e-92 341.7 316 50.0
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.1e-92 341.7 308 50.6
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.1e-92 341.7 311 52.1
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 8.0e-92 341.3 316 52.5
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 8.0e-92 341.3 310 51.6
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.0e-91 340.9 310 52.6
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.4e-91 340.5 309 51.8
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.8e-91 340.1 314 51.9
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 2.3e-91 339.7 304 53.6
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.3e-91 339.7 309 52.8
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.0e-91 339.3 309 52.4
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 3.0e-91 339.3 314 51.6
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 4.0e-91 339.0 308 51.0
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.0e-91 339.0 312 50.3
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 4.0e-91 339.0 310 52.3
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 5.2e-91 338.6 303 52.5
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 5.2e-91 338.6 309 51.1
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 5.2e-91 338.6 304 53.3
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 6.8e-91 338.2 309 50.8
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 6.8e-91 338.2 314 51.6
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 6.8e-91 338.2 314 51.9
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 6.8e-91 338.2 309 50.5
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 8.9e-91 337.8 309 50.5
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 8.9e-91 337.8 310 51.6
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.2e-90 337.4 307 52.8
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.2e-90 337.4 311 50.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.2e-90 337.4 308 51.6
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.2e-90 337.4 309 51.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.5e-90 337.0 311 50.8
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.5e-90 337.0 310 51.3
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-90 336.7 299 53.2
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.6e-90 336.3 309 51.5
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.6e-90 336.3 308 50.6
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.6e-90 336.3 311 51.8
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 3.4e-90 335.9 307 52.1
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 3.4e-90 335.9 311 50.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.4e-90 335.9 308 51.0
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 3.4e-90 335.9 304 52.6
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 3.4e-90 335.9 309 51.5
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 4.4e-90 335.5 310 52.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 4.4e-90 335.5 309 50.8
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 5.7e-90 335.1 307 51.8
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 5.7e-90 335.1 308 51.9
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 5.7e-90 335.1 304 53.0
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 5.7e-90 335.1 310 50.6
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 5.7e-90 335.1 309 52.1
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 5.7e-90 335.1 309 51.5
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 7.5e-90 334.7 310 51.3
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 9.8e-90 334.3 308 51.9
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 9.8e-90 334.3 313 50.2
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 9.8e-90 334.3 303 51.2
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.3e-89 334.0 310 51.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.3e-89 334.0 309 51.1
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.3e-89 334.0 314 49.0
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.2e-89 333.2 309 50.8
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.2e-89 333.2 309 51.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.2e-89 333.2 309 51.8
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.8e-89 332.8 309 50.8
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 2.8e-89 332.8 313 49.8
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 2.8e-89 332.8 309 51.5
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.7e-89 332.4 306 51.0
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 3.7e-89 332.4 313 49.2
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.7e-89 332.4 309 52.1
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 3.7e-89 332.4 308 50.6
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 6.3e-89 331.6 310 50.0
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 6.3e-89 331.6 312 49.7
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.1e-88 330.9 309 50.8
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.1e-88 330.9 310 50.6
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.1e-88 330.9 317 48.9
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.1e-88 330.9 311 52.1
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.1e-88 330.9 309 49.8
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.4e-88 330.5 315 47.6
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.4e-88 329.7 310 50.3
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.1e-88 328.9 312 49.7
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 5.4e-88 328.6 309 49.8
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 5.4e-88 328.6 307 50.2
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.2e-88 327.8 310 51.0
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.6e-87 327.0 306 51.3
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.0e-87 326.6 312 50.0
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.5e-87 325.9 311 51.1
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 4.5e-87 325.5 310 51.3
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.0e-86 324.3 312 48.4
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.7e-86 323.6 308 49.7
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.1e-85 320.9 301 50.8
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 1.1e-85 320.9 308 50.0
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.9e-85 320.1 304 50.7
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.9e-85 320.1 308 48.4
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.3e-85 319.3 311 49.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.2e-84 317.4 309 49.5
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.2e-84 317.4 309 49.5
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 2.1e-84 316.6 311 48.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 4.7e-84 315.5 306 50.0
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 6.1e-84 315.1 313 47.6
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 8.3e-81 304.7 277 51.3
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.1e-80 304.3 280 52.1
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.4e-80 303.1 299 48.8
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.2e-80 302.8 277 50.9
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 6.0e-79 298.5 304 47.4
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.2e-76 290.8 310 44.5
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 2.0e-74 283.5 275 48.4
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 2.2e-73 280.0 311 44.1
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.4e-73 278.5 288 47.9
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.1e-72 277.7 309 45.3
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.1e-72 277.7 309 45.3
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.1e-72 275.8 305 46.2
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 8.1e-68 261.5 305 43.9
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.0e-62 244.6 300 43.3
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 9.9e-58 228.0 217 48.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.9e-56 223.8 222 47.3
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.1e-46 189.1 259 39.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 2.1e-44 183.7 171 50.9
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 6.2e-44 182.2 333 35.7
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.4e-40 171.0 155 49.7
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.3e-36 157.9 256 38.3
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 2.8e-36 156.8 302 33.8
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.6e-34 148.7 126 53.2
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.7e-30 135.6 106 57.5
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 8.7e-30 135.2 334 29.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.5e-29 134.4 123 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 4.2e-24 116.3 232 35.3
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.1e-22 109.4 102 46.1
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 4.8e-12 76.3 50 64.0


User provided reference genes

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