Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0493 Selaginella moellendorffii HOM05D000973 ORTHO05D050865 6.4e-155 550.8 299 100.0
SMO361G0202 Selaginella moellendorffii HOM05D000973 ORTHO05D050865 3.3e-143 511.9 285 98.2
AagrBONN_evm.TU.Sc2ySwM_369.295 Anthoceros agrestis HOM05D000973 ORTHO05D000644 6.0e-12 75.9 212 25.9
Mapoly0067s0044 Marchantia polymorpha HOM05D000973 ORTHO05D000652 1.3e-11 74.7 214 24.3
QL01p020240 Quercus lobata HOM05D000973 ORTHO05D000652 1.7e-11 74.3 180 31.1
SEGI_01812 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 3.0e-11 73.6 175 29.7
Sp7g05520 Schrenkiella parvula HOM05D000973 ORTHO05D000652 1.1e-10 71.6 138 33.3
Pp3c3_15720 Physcomitrium patens HOM05D000733 ORTHO05D000644 1.5e-10 71.2 182 29.1
SEGI_30661 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 2.5e-10 70.5 164 30.5
Solyc02g036480.1 Solanum lycopersicum HOM05D000973 ORTHO05D000652 3.3e-10 70.1 168 32.7
Actinidia22882 Actinidia chinensis HOM05D000973 ORTHO05D000652 2.1e-09 67.4 161 30.4
Prupe.8G267700 Prunus persica HOM05D000973 ORTHO05D000652 2.1e-09 67.4 169 27.8
SEGI_16011 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 2.1e-09 67.4 169 30.8
Sabra17G0126200 Salix brachista HOM05D000973 ORTHO05D000652 2.8e-09 67.0 179 26.8
ClCG03G014140 Citrullus lanatus HOM05D000973 ORTHO05D000652 3.6e-09 66.6 172 32.0
Thhalv10028131m.g Eutrema salsugineum HOM05D000973 ORTHO05D000652 3.6e-09 66.6 142 31.7
PGR083G0477 Punica granatum HOM05D000973 ORTHO05D000652 3.6e-09 66.6 173 31.2
SEGI_30112 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 3.6e-09 66.6 174 27.6
AT5G36970 Arabidopsis thaliana HOM05D000973 ORTHO05D000652 4.8e-09 66.2 127 33.1
Pp3c23_12930 Physcomitrium patens HOM05D000973 ORTHO05D003779 4.8e-09 66.2 205 28.3
Potri.017G154000 Populus trichocarpa HOM05D000973 ORTHO05D000652 6.2e-09 65.9 179 25.7
unitig_0.g2874 Utricularia gibba HOM05D002137 ORTHO05D002144 6.2e-09 65.9 152 32.2
CiPaw.15G107600 Carya illinoinensis HOM05D000973 ORTHO05D000652 1.4e-08 64.7 161 27.3
CDE08G0759 Ceratophyllum demersum HOM05D002649 ORTHO05D002838 1.4e-08 64.7 172 31.4
Rhsim10G0186800 Rhododendron simsii HOM05D000973 ORTHO05D000652 1.4e-08 64.7 171 27.5
Sc10g0008620 Simmondsia chinensis HOM05D000973 ORTHO05D000652 1.4e-08 64.7 164 31.7
Dinv10735 Davidia involucrata HOM05D000973 ORTHO05D000652 1.8e-08 64.3 171 31.6
Nn4g25179 Nelumbo nucifera HOM05D000973 ORTHO05D000652 1.8e-08 64.3 161 29.2
QL10p033741 Quercus lobata HOM05D000973 ORTHO05D000652 1.8e-08 64.3 161 27.3
Sopen03g029700 Solanum pennellii HOM05D000973 ORTHO05D000652 2.4e-08 63.9 163 28.2
CiPaw.14G091400 Carya illinoinensis HOM05D000973 ORTHO05D000652 3.1e-08 63.5 174 31.0
ECA233G3685 Erigeron canadensis HOM05D000382 ORTHO05D000391 3.1e-08 63.5 178 23.0
Lsat_1_v5_gn_5_65420 Lactuca sativa HOM05D000973 ORTHO05D000652 3.1e-08 63.5 172 27.3
ATR0307G072 Amborella trichopoda HOM05D000973 ORTHO05D000652 4.0e-08 63.2 172 31.4
SGA_v2.0_scaffold45G17099 Striga asiatica HOM05D000973 ORTHO05D000652 4.0e-08 63.2 125 32.0
CiPaw.02G139800 Carya illinoinensis HOM05D002137 ORTHO05D002144 5.3e-08 62.8 127 35.4
FAN13G2261 Fragaria x ananassa HOM05D000973 ORTHO05D000652 5.3e-08 62.8 125 31.2
CiPaw.13G120600 Carya illinoinensis HOM05D000973 ORTHO05D000652 6.9e-08 62.4 172 30.8
FvH4_5g39741 Fragaria vesca HOM05D000973 ORTHO05D000652 6.9e-08 62.4 125 30.4
FAN08G2067 Fragaria x ananassa HOM05D000973 ORTHO05D000652 6.9e-08 62.4 125 30.4
FAN17G1633 Fragaria x ananassa HOM05D002540 ORTHO05D002672 6.9e-08 62.4 127 29.1
RcHm_v2.0_Chr7g0176941 Rosa chinensis HOM05D000973 ORTHO05D000652 6.9e-08 62.4 193 24.4
Medtr5g087760 Medicago truncatula HOM05D000973 ORTHO05D000652 9.0e-08 62.0 172 26.7
Sabra16G0322300 Salix brachista HOM05D000973 ORTHO05D000652 9.0e-08 62.0 133 33.1
Glyma.18G047800 Glycine max HOM05D000973 ORTHO05D000652 1.2e-07 61.6 172 27.3
Mapoly0007s0205 Marchantia polymorpha HOM05D000973 ORTHO05D000652 1.2e-07 61.6 193 27.5
Medtr2g012550 Medicago truncatula HOM05D000973 ORTHO05D000652 1.2e-07 61.6 171 29.8
Phvul.006G083600 Phaseolus vulgaris HOM05D000973 ORTHO05D000652 1.2e-07 61.6 172 27.9
SGA_v2.0_scaffold90G27737 Striga asiatica HOM05D000973 ORTHO05D000652 1.2e-07 61.6 169 26.6
Lsat_1_v5_gn_3_24501 Lactuca sativa HOM05D002137 ORTHO05D002144 1.5e-07 61.2 121 33.1
MD09G1187500 Malus domestica HOM05D000973 ORTHO05D000652 1.5e-07 61.2 126 34.1
Medtr3g078800 Medicago truncatula HOM05D000973 ORTHO05D000652 1.5e-07 61.2 177 32.8
Sopen02g011840 Solanum pennellii HOM05D000973 ORTHO05D000652 1.5e-07 61.2 168 30.4
FvH4_5g18570 Fragaria vesca HOM05D000973 ORTHO05D000652 2.0e-07 60.8 155 25.8
FAN18G0457 Fragaria x ananassa HOM05D000973 ORTHO05D000652 2.0e-07 60.8 125 29.6
FAN18G1903 Fragaria x ananassa HOM05D000973 ORTHO05D000652 2.0e-07 60.8 155 25.8
MBI03_g13438_MAGBIO Magnolia biondii HOM05D000973 ORTHO05D000652 2.0e-07 60.8 175 27.4
Nn3g18547 Nelumbo nucifera HOM05D000973 ORTHO05D000652 2.0e-07 60.8 162 28.4
PSO017G0252 Papaver somniferum HOM05D000980 ORTHO05D000649 2.0e-07 60.8 133 34.6
PGR004G2871 Punica granatum HOM05D000973 ORTHO05D000652 2.0e-07 60.8 136 30.1
Sabra15G0156800 Salix brachista HOM05D000973 ORTHO05D000652 2.0e-07 60.8 133 32.3
TWI81G0388 Tripterygium wilfordii HOM05D000973 ORTHO05D000652 2.0e-07 60.8 171 30.4
BcaB02g08034 Brassica carinata HOM05D000973 ORTHO05D000652 2.6e-07 60.5 133 31.6
CSS0035712 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000649 2.6e-07 60.5 169 27.2
Duzib116G0631 Durio zibethinus HOM05D000973 ORTHO05D000652 2.6e-07 60.5 126 31.7
Eucgr.F02922 Eucalyptus grandis HOM05D000973 ORTHO05D000652 2.6e-07 60.5 169 29.0
FAN08G2547 Fragaria x ananassa HOM05D000973 ORTHO05D000652 2.6e-07 60.5 187 25.7
CSS0043169 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000649 3.4e-07 60.1 163 27.6
Cc07_g12590 Coffea canephora HOM05D000973 ORTHO05D000652 3.4e-07 60.1 146 28.1
FAN22G0800 Fragaria x ananassa HOM05D002540 ORTHO05D002672 3.4e-07 60.1 127 27.6
Glyma.11G203000 Glycine max HOM05D000973 ORTHO05D000652 3.4e-07 60.1 173 27.2
Phvul.L006401 Phaseolus vulgaris HOM05D000973 ORTHO05D000652 3.4e-07 60.1 169 24.9
SEGI_09853 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 3.4e-07 60.1 174 27.0
Dinv11735 Davidia involucrata HOM05D000973 ORTHO05D000652 4.4e-07 59.7 160 28.1
Hma1.2p1_0218F.1_g092660 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 4.4e-07 59.7 162 29.0
PSO384G0774 Papaver somniferum HOM05D000973 ORTHO05D000652 4.4e-07 59.7 175 28.6
Psat2g022400 Pisum sativum HOM05D000973 ORTHO05D000652 4.4e-07 59.7 158 29.7
Potri.015G148200 Populus trichocarpa HOM05D000973 ORTHO05D000652 4.4e-07 59.7 126 32.5
RcHm_v2.0_Chr7g0242031 Rosa chinensis HOM05D000973 ORTHO05D000652 4.4e-07 59.7 125 29.6
CANSAT78G2314 Cannabis sativa HOM05D000973 ORTHO05D000652 5.8e-07 59.3 138 28.3
Migut.O00279 Erythranthe guttata HOM05D000973 ORTHO05D000652 5.8e-07 59.3 161 26.1
PSO478G4230 Papaver somniferum HOM05D002540 ORTHO05D002672 5.8e-07 59.3 156 28.2
vmacro20443 Vaccinium macrocarpon HOM05D000973 ORTHO05D000652 5.8e-07 59.3 174 26.4
ATR0124G017 Amborella trichopoda HOM05D000973 ORTHO05D000652 7.6e-07 58.9 156 27.6
AL7G45600 Arabidopsis lyrata HOM05D000973 ORTHO05D000652 7.6e-07 58.9 127 31.5
Carub.0004s1772 Capsella rubella HOM05D000980 ORTHO05D000649 7.6e-07 58.9 123 35.0
Gohir.A09G115800 Gossypium hirsutum HOM05D000973 ORTHO05D000652 7.6e-07 58.9 137 28.5
Lj9P411T45 Lonicera japonica HOM05D000973 ORTHO05D000652 7.6e-07 58.9 171 25.1
TAR622G0017 Trochodendron aralioides HOM05D000973 ORTHO05D000652 7.6e-07 58.9 126 29.4
VMungo0540G2442 Vigna mungo HOM05D000973 ORTHO05D000652 7.6e-07 58.9 173 26.0
VMungo0720G0510 Vigna mungo HOM05D000973 ORTHO05D000652 7.6e-07 58.9 163 24.5
GSVIVG01024247001 Vitis vinifera HOM05D000973 ORTHO05D000652 7.6e-07 58.9 161 24.8
COL.COLO4_30053 Corchorus olitorius HOM05D000973 ORTHO05D000652 9.9e-07 58.5 161 26.7
Glyma.19G198600 Glycine max HOM05D000980 ORTHO05D000649 9.9e-07 58.5 163 28.2
MBI19_g28097_MAGBIO Magnolia biondii HOM05D000973 ORTHO05D000652 9.9e-07 58.5 161 26.7
Nitab4.5_0001495g0010 Nicotiana tabacum HOM05D000973 ORTHO05D000652 9.9e-07 58.5 162 25.9
PSO063G3876 Papaver somniferum HOM05D000980 ORTHO05D000649 9.9e-07 58.5 133 33.8
Duzib211G0611 Durio zibethinus HOM05D000973 ORTHO05D000652 1.3e-06 58.2 136 28.7
Nn2g13881 Nelumbo nucifera HOM05D000733 ORTHO05D000649 1.3e-06 58.2 151 30.5
Thecc.05G197100 Theobroma cacao HOM05D000973 ORTHO05D000652 1.3e-06 58.2 161 26.1
VMungo0540G2319 Vigna mungo HOM05D000733 ORTHO05D000649 1.3e-06 58.2 152 23.7
Haze_23672 Corylus avellana HOM05D000973 ORTHO05D000652 1.7e-06 57.8 126 34.1
HanXRQChr15g0469231 Helianthus annuus HOM05D000973 ORTHO05D000652 1.7e-06 57.8 161 22.4
Lj4C249T6 Lonicera japonica HOM05D000973 ORTHO05D000652 1.7e-06 57.8 167 26.9
Medtr1g077560 Medicago truncatula HOM05D000973 ORTHO05D000652 1.7e-06 57.8 171 25.7
arahy.Tifrunner.gnm1.ann1.2X3X0W Arachis hypogaea HOM05D000980 ORTHO05D000649 2.2e-06 57.4 152 27.0
arahy.Tifrunner.gnm1.ann1.ECG1V9 Arachis hypogaea HOM05D000980 ORTHO05D000649 2.2e-06 57.4 152 27.0
CARHR057490 Cardamine hirsuta HOM05D000973 ORTHO05D000652 2.2e-06 57.4 125 32.0
Manes.04G052400 Manihot esculenta HOM05D000973 ORTHO05D000652 2.2e-06 57.4 204 29.9
PSO017G6151 Papaver somniferum HOM05D002540 ORTHO05D002672 2.2e-06 57.4 156 27.6
RcHm_v2.0_Chr7g0182611 Rosa chinensis HOM05D000973 ORTHO05D000652 2.2e-06 57.4 126 28.6
SEGI_25000 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 2.2e-06 57.4 174 25.9
Actinidia37187 Actinidia chinensis HOM05D000973 ORTHO05D000652 2.9e-06 57.0 172 31.4
Duzib177G0981 Durio zibethinus HOM05D000973 ORTHO05D000652 2.9e-06 57.0 161 26.7
Thhalv10002079m.g Eutrema salsugineum HOM05D000973 ORTHO05D000652 2.9e-06 57.0 172 29.1
Glyma.10G079700 Glycine max HOM05D000980 ORTHO05D000649 2.9e-06 57.0 121 33.1
Manes.02G226501 Manihot esculenta HOM05D000973 ORTHO05D000652 2.9e-06 57.0 163 25.8
Peaxi162Scf00392g00045 Petunia axillaris HOM05D000733 ORTHO05D000649 2.9e-06 57.0 173 27.2
Potri.004G067100 Populus trichocarpa HOM05D000973 ORTHO05D000652 2.9e-06 57.0 163 26.4
PGSC0003DMG400015214 Solanum tuberosum HOM05D000973 ORTHO05D000652 2.9e-06 57.0 162 25.9
Glyma.15G065400 Glycine max HOM05D000733 ORTHO05D000649 3.8e-06 56.6 173 22.0
Lalb_Chr15g0085481 Lupinus albus HOM05D000973 ORTHO05D000652 3.8e-06 56.6 122 31.1
Manes.02G083400 Manihot esculenta HOM05D000973 ORTHO05D000652 3.8e-06 56.6 136 26.5
Phvul.008G207300 Phaseolus vulgaris HOM05D000973 ORTHO05D000652 3.8e-06 56.6 172 28.5
Gohir.A05G392300 Gossypium hirsutum HOM05D000973 ORTHO05D000652 4.9e-06 56.2 160 26.2
SMO172G0012 Selaginella moellendorffii HOM05D000973 ORTHO05D000649 4.9e-06 56.2 126 31.7
TWI53G1827 Tripterygium wilfordii HOM05D000973 ORTHO05D000652 4.9e-06 56.2 125 28.8
Dinv16242 Davidia involucrata HOM05D001163 ORTHO05D000649 6.4e-06 55.8 172 26.7
Duzib216G0001 Durio zibethinus HOM05D000973 ORTHO05D000652 6.4e-06 55.8 161 26.1
Gohir.D04G024800 Gossypium hirsutum HOM05D000973 ORTHO05D000652 6.4e-06 55.8 160 26.2
Gorai.012G027300 Gossypium raimondii HOM05D000973 ORTHO05D000652 6.4e-06 55.8 160 26.2
Lalb_Chr04g0249711 Lupinus albus HOM05D000973 ORTHO05D000652 6.4e-06 55.8 123 31.7
Solyc03g019920.1 Solanum lycopersicum HOM05D000973 ORTHO05D000652 6.4e-06 55.8 163 26.4
Solyc08g065140.1 Solanum lycopersicum HOM05D002137 ORTHO05D002144 6.4e-06 55.8 120 29.2
C03p23280 Brassica napus HOM05D000980 ORTHO05D000649 8.4e-06 55.5 103 36.9
BolC3t14728H Brassica oleracea HOM05D000980 ORTHO05D000649 8.4e-06 55.5 103 36.9
CSS0036942 Camellia sinensis var. sinensis HOM05D002137 ORTHO05D002144 8.4e-06 55.5 118 33.1
CiPaw.13G144600 Carya illinoinensis HOM05D000733 ORTHO05D000649 8.4e-06 55.5 161 28.6
Cc00_g12610 Coffea canephora HOM05D000973 ORTHO05D000652 8.4e-06 55.5 161 24.2
Thhalv10027581m.g Eutrema salsugineum HOM05D002540 ORTHO05D002672 8.4e-06 55.5 172 29.1
Glyma.02G274400 Glycine max HOM05D000973 ORTHO05D000652 8.4e-06 55.5 172 29.1
HanXRQChr13g0403571 Helianthus annuus HOM05D000733 ORTHO05D000649 8.4e-06 55.5 154 29.2
Nitab4.5_0005152g0040 Nicotiana tabacum HOM05D000733 ORTHO05D000649 8.4e-06 55.5 172 26.7
Nitab4.5_0007717g0010 Nicotiana tabacum HOM05D000973 ORTHO05D000652 8.4e-06 55.5 162 25.3
Peaxi162Scf00342g00033 Petunia axillaris HOM05D000973 ORTHO05D000652 8.4e-06 55.5 176 26.7
Phvul.006G194400 Phaseolus vulgaris HOM05D000733 ORTHO05D000649 8.4e-06 55.5 164 22.0
Potri.001G200700 Populus trichocarpa HOM05D002137 ORTHO05D002144 8.4e-06 55.5 165 29.7
SEGI_39149 Sequoiadendron giganteum HOM05D000733 ORTHO05D005393 8.4e-06 55.5 173 27.2
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 8.4e-06 55.5 160 30.0


User provided reference genes

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