Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.4e-196 689.5 367 100.0
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 8.3e-189 663.7 367 97.5
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 4.9e-56 222.6 401 38.7
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 4.1e-55 219.5 413 36.8
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 3.9e-53 213.0 392 37.8
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 5.6e-44 182.6 386 36.0
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 7.3e-44 182.2 388 35.3
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.8e-43 180.3 384 34.9
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 3.6e-43 179.9 389 36.0
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.1e-42 178.3 388 35.1
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 5.2e-42 176.0 387 36.2
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 2.6e-41 173.7 383 34.5
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 4.4e-41 172.9 396 34.8
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.3e-40 171.4 385 33.5
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 2.2e-40 170.6 400 34.8
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 2.2e-40 170.6 382 35.1
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 4.9e-40 169.5 376 33.2
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 6.4e-40 169.1 376 32.7
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 6.4e-40 169.1 390 35.4
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 6.4e-40 169.1 387 33.9
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 8.3e-40 168.7 376 33.0
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 8.3e-40 168.7 387 34.4
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 8.3e-40 168.7 389 34.4
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 1.1e-39 168.3 391 35.5
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 1.1e-39 168.3 382 33.5
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.4e-39 167.9 391 34.8
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 4.1e-39 166.4 394 34.3
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 4.1e-39 166.4 391 34.8
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 7.1e-39 165.6 376 33.2
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 9.2e-39 165.2 376 32.4
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 1.6e-38 164.5 387 35.9
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 2.7e-38 163.7 387 35.7
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 3.5e-38 163.3 394 34.3
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 3.5e-38 163.3 388 34.5
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 3.5e-38 163.3 383 32.6
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 4.6e-38 162.9 376 32.4
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 4.6e-38 162.9 387 35.1
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 6.0e-38 162.5 396 33.8
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 7.8e-38 162.2 391 34.5
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.0e-37 161.8 391 32.5
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 1.3e-37 161.4 379 33.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 1.3e-37 161.4 390 33.3
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 2.3e-37 160.6 395 32.4
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 3.0e-37 160.2 393 32.1
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 3.9e-37 159.8 376 33.0
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 6.6e-37 159.1 376 31.9
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.6e-37 159.1 405 33.6
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.1e-36 158.3 387 34.9
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 1.5e-36 157.9 384 32.3
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.5e-36 157.9 384 32.8
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 3.3e-36 156.8 387 34.1
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 3.3e-36 156.8 376 31.9
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 3.3e-36 156.8 386 34.5
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 5.6e-36 156.0 386 34.5
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 5.6e-36 156.0 391 34.0
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 5.6e-36 156.0 410 31.5
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 7.3e-36 155.6 387 32.0
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 9.5e-36 155.2 370 32.7
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.6e-35 154.5 386 32.9
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.6e-35 154.5 383 33.2
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.1e-35 154.1 409 31.3
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 3.6e-35 153.3 391 34.3
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 8.1e-35 152.1 388 32.5
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 1.1e-34 151.8 378 33.1
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 1.1e-34 151.8 370 32.4
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 2.4e-34 150.6 364 34.3
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 2.4e-34 150.6 384 33.1
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 1.5e-33 147.9 382 32.2
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 2.0e-33 147.5 379 32.2
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 2.6e-33 147.1 386 32.4
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 2.6e-33 147.1 382 31.9
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 3.4e-33 146.7 382 32.2
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 5.8e-33 146.0 337 35.9
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 5.8e-33 146.0 385 31.9
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 9.9e-33 145.2 315 36.8
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 2.9e-32 143.7 345 32.5
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 8.4e-32 142.1 325 34.8
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 3.2e-31 140.2 453 30.2
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 5.4e-31 139.4 385 33.0
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 5.4e-31 139.4 390 32.3
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 1.2e-30 138.3 404 30.2
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.6e-30 137.9 358 32.7
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 3.5e-30 136.7 323 31.9
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.3e-29 134.8 215 41.4
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 1.7e-29 134.4 323 31.3
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 2.3e-29 134.0 384 32.6
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 5.1e-29 132.9 394 31.0
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.5e-28 131.3 456 29.2
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 1.8e-26 124.4 375 29.6
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 3.4e-25 120.2 219 38.4
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.3e-24 118.2 173 41.0
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.7e-24 117.9 352 29.5
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 2.2e-24 117.5 363 30.0
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 9.3e-23 112.1 267 33.0
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 1.7e-21 107.8 310 30.6
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 7.3e-20 102.4 289 31.8
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 9.6e-20 102.1 290 29.0
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.1e-19 100.9 289 31.5
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 3.6e-19 100.1 294 29.9
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 4.0e-18 96.7 301 28.9
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 3.8e-16 90.1 312 29.5
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 3.2e-15 87.0 489 26.4
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 1.6e-14 84.7 290 29.7
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 4.6e-14 83.2 100 48.0
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.1e-12 78.6 134 41.8
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 6.2e-11 72.8 383 26.6
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 3.8e-08 63.5 236 28.8


User provided reference genes

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