Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0265 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 1.6e-115 419.5 215 100.0
SMO199G0125 Selaginella moellendorffii HOM05D004631 ORTHO05D005223 5.9e-94 347.8 257 75.9
SMO361G0508 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 4.1e-71 271.9 153 93.5
SMO361G0571 Selaginella moellendorffii HOM05D018282 ORTHO05D005223 1.9e-39 166.8 102 87.3
SMO089G0021 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 7.1e-23 111.7 95 67.4
SMO079G0005 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 3.9e-21 105.9 95 65.3
Ca_04405_v3 Cicer arietinum L. HOM05D004631 ORTHO05D005223 3.6e-19 99.4 256 30.9
Nn4g22438 Nelumbo nucifera HOM05D004631 ORTHO05D005223 4.0e-18 95.9 249 32.5
SGA_v2.0_scaffold18G08240 Striga asiatica HOM05D004631 ORTHO05D005223 5.3e-18 95.5 246 31.3
MSTRG.24067 Avicennia marina HOM05D004631 ORTHO05D005223 9.0e-18 94.7 249 30.1
CAN.G473.59 Capsicum annuum HOM05D004631 ORTHO05D005223 9.0e-18 94.7 247 32.4
Nitab4.5_0001863g0070 Nicotiana tabacum HOM05D004631 ORTHO05D005223 9.0e-18 94.7 228 32.5
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 1.2e-17 94.4 247 32.0
BcaC06g31006 Brassica carinata HOM05D004631 ORTHO05D005223 2.0e-17 93.6 256 30.9
Glyma.16G063100 Glycine max HOM05D004631 ORTHO05D005223 2.0e-17 93.6 254 29.9
BcaC06g33833 Brassica carinata HOM05D004631 ORTHO05D005223 2.6e-17 93.2 243 30.5
BolC7t44152H Brassica oleracea HOM05D004631 ORTHO05D005223 2.6e-17 93.2 243 30.5
Peaxi162Scf00420g00342 Petunia axillaris HOM05D004631 ORTHO05D005223 2.6e-17 93.2 233 32.2
Peaxi162Scf00420g00345 Petunia axillaris HOM05D004631 ORTHO05D005223 2.6e-17 93.2 233 32.2
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 2.6e-17 93.2 244 32.0
C07p36360 Brassica napus HOM05D004631 ORTHO05D005223 4.5e-17 92.4 243 30.5
arahy.Tifrunner.gnm1.ann1.5W0L45 Arachis hypogaea HOM05D004631 ORTHO05D005223 7.6e-17 91.7 255 30.2
Cc07_g00410 Coffea canephora HOM05D004631 ORTHO05D005223 9.9e-17 91.3 246 31.3
Mapoly0078s0021 Marchantia polymorpha HOM05D004631 ORTHO05D005223 9.9e-17 91.3 253 33.2
Sabra09G0043700 Salix brachista HOM05D004631 ORTHO05D005223 9.9e-17 91.3 255 31.8
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.3e-16 90.9 250 32.8
Lj7A605T75 Lonicera japonica HOM05D004631 ORTHO05D005223 1.7e-16 90.5 248 30.6
arahy.Tifrunner.gnm1.ann1.NS464T Arachis hypogaea HOM05D004631 ORTHO05D005223 2.2e-16 90.1 255 29.8
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 2.9e-16 89.7 249 31.3
Carub.0005s0558 Capsella rubella HOM05D004631 ORTHO05D005223 3.8e-16 89.4 256 30.9
VMungo1383G3654 Vigna mungo HOM05D004631 ORTHO05D005223 3.8e-16 89.4 224 33.5
CSS0019474 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 4.9e-16 89.0 246 30.9
CiPaw.04G033100 Carya illinoinensis HOM05D004631 ORTHO05D005223 4.9e-16 89.0 255 30.2
Hma1.2p1_0279F.1_g112270 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 4.9e-16 89.0 250 32.4
Aa31LG2G5340 Aethionema arabicum HOM05D004631 ORTHO05D005223 6.4e-16 88.6 274 31.8
A06p41300 Brassica napus HOM05D004631 ORTHO05D005223 6.4e-16 88.6 247 29.6
BraA06t27055Z Brassica rapa HOM05D004631 ORTHO05D005223 6.4e-16 88.6 247 29.6
Hma1.2p1_0227F.1_g095910 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 6.4e-16 88.6 250 30.8
Phvul.008G148800 Phaseolus vulgaris HOM05D004631 ORTHO05D005223 6.4e-16 88.6 193 35.2
Sopen02g038460 Solanum pennellii HOM05D004631 ORTHO05D005223 6.4e-16 88.6 255 29.8
Glyma.19G082400 Glycine max HOM05D004631 ORTHO05D005223 8.4e-16 88.2 254 29.5
AL5G16540 Arabidopsis lyrata HOM05D004631 ORTHO05D005223 1.1e-15 87.8 259 29.7
Thhalv10004822m.g Eutrema salsugineum HOM05D004631 ORTHO05D005223 1.1e-15 87.8 247 30.4
Lalb_Chr14g0363051 Lupinus albus HOM05D004631 ORTHO05D005223 1.1e-15 87.8 252 28.2
Prupe.3G299600 Prunus persica HOM05D004631 ORTHO05D005223 1.4e-15 87.4 242 32.6
CiPaw.03G050500 Carya illinoinensis HOM05D004631 ORTHO05D005223 1.9e-15 87.0 253 30.8
Manes.15G156400 Manihot esculenta HOM05D004631 ORTHO05D005223 2.4e-15 86.7 255 31.0
Rhsim08G0046200 Rhododendron simsii HOM05D004631 ORTHO05D005223 3.2e-15 86.3 244 31.1
Lsat_1_v5_gn_0_32720 Lactuca sativa HOM05D004631 ORTHO05D005223 4.2e-15 85.9 248 29.0
Manes.07G089400 Manihot esculenta HOM05D004631 ORTHO05D005223 4.2e-15 85.9 253 30.0
TWI59G0755 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 4.2e-15 85.9 251 29.1
HanXRQChr17g0549531 Helianthus annuus HOM05D004631 ORTHO05D005223 7.1e-15 85.1 250 28.4
vmacro18314 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 7.1e-15 85.1 249 30.5
AT3G27310 Arabidopsis thaliana HOM05D004631 ORTHO05D005223 9.3e-15 84.7 262 30.5
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 1.6e-14 84.0 247 30.0
Haze_14815 Corylus avellana HOM05D004631 ORTHO05D005223 1.6e-14 84.0 259 30.9
Eucgr.I01692 Eucalyptus grandis HOM05D004631 ORTHO05D005223 1.6e-14 84.0 255 28.6
PGR142G2057 Punica granatum HOM05D004631 ORTHO05D005223 2.1e-14 83.6 260 29.6
unitig_62.g23368 Utricularia gibba HOM05D004631 ORTHO05D005223 2.1e-14 83.6 253 28.9
Cfa007277 Carpinus fangiana HOM05D004631 ORTHO05D005223 3.5e-14 82.8 253 31.2
Potri.001G264500 Populus trichocarpa HOM05D004631 ORTHO05D005223 3.5e-14 82.8 253 28.5
vmacro05924 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 3.5e-14 82.8 247 30.8
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 7.9e-14 81.6 233 29.6
Sed0025843 Sechium edule HOM05D004631 ORTHO05D005223 7.9e-14 81.6 202 30.7
Cpa.g.c34704 Carica papaya HOM05D004631 ORTHO05D005223 1.0e-13 81.3 248 30.2
DCAR_021756 Daucus carota HOM05D004631 ORTHO05D005223 1.0e-13 81.3 247 29.6
SalBow1G3920 Salvia bowleyana HOM05D004631 ORTHO05D005223 1.0e-13 81.3 276 26.8
Atru.chr6.2487 Acer truncatum HOM05D004631 ORTHO05D005223 1.3e-13 80.9 194 31.4
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 1.3e-13 80.9 248 28.2
MSTRG.3110 Avicennia marina HOM05D004631 ORTHO05D005223 1.3e-13 80.9 237 31.2
CsaV3_6G001200 Cucumis sativus L. HOM05D004631 ORTHO05D005223 1.8e-13 80.5 191 31.9
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 1.8e-13 80.5 261 29.5
Potri.009G059300 Populus trichocarpa HOM05D004631 ORTHO05D005223 1.8e-13 80.5 253 28.1
Sabra16G0162600 Salix brachista HOM05D004631 ORTHO05D005223 2.3e-13 80.1 257 29.6
COL.COLO4_29276 Corchorus olitorius HOM05D004631 ORTHO05D005223 3.9e-13 79.3 212 31.1
ECA246G0472 Erigeron canadensis HOM05D004631 ORTHO05D005223 5.1e-13 79.0 252 28.2
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 5.1e-13 79.0 197 29.9
FAN05G1873 Fragaria x ananassa HOM05D004631 ORTHO05D005223 5.1e-13 79.0 251 27.1
FAN14G1903 Fragaria x ananassa HOM05D004631 ORTHO05D005223 5.1e-13 79.0 198 29.8
MBI05_g32279_MAGBIO Magnolia biondii HOM05D004631 ORTHO05D005223 5.1e-13 79.0 195 30.8
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 6.7e-13 78.6 252 29.0
QL02p072911 Quercus lobata HOM05D004631 ORTHO05D005223 8.7e-13 78.2 249 28.5
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 8.7e-13 78.2 250 26.8
Sp2g16470 Schrenkiella parvula HOM05D004631 ORTHO05D005223 8.7e-13 78.2 212 30.2
TPR.G29003 Trifolium pratense HOM05D004631 ORTHO05D005223 8.7e-13 78.2 194 29.9
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.1e-12 77.8 257 28.0
FAN09G3073 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.1e-12 77.8 257 26.1
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 1.1e-12 77.8 242 29.8
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.5e-12 77.4 192 32.3
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.5e-12 77.4 282 28.4
HanXRQChr15g0487081 Helianthus annuus HOM05D004631 ORTHO05D005223 1.9e-12 77.0 247 30.0
Psat1g084240 Pisum sativum HOM05D004631 ORTHO05D005223 1.9e-12 77.0 213 28.6
FAN02G2863 Fragaria x ananassa HOM05D004631 ORTHO05D005223 2.5e-12 76.6 197 29.4
Lj2g0014181 Lotus japonicus HOM05D004631 ORTHO05D005223 2.5e-12 76.6 248 26.6
Medtr6g023080 Medicago truncatula HOM05D004631 ORTHO05D005223 4.3e-12 75.9 142 33.8
TAR371G0552 Trochodendron aralioides HOM05D004631 ORTHO05D005223 4.3e-12 75.9 253 27.7
GSVIVG01001850001 Vitis vinifera HOM05D004631 ORTHO05D005223 4.3e-12 75.9 255 28.2
ATR0824G076 Amborella trichopoda HOM05D004631 ORTHO05D005223 5.6e-12 75.5 248 29.0
TWI23G0469 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 5.6e-12 75.5 172 30.8
Medtr6g022770 Medicago truncatula HOM05D004631 ORTHO05D005223 7.4e-12 75.1 122 36.1
Pp3c7_140 Physcomitrium patens HOM05D004631 ORTHO05D005223 7.4e-12 75.1 252 29.4
Sc03g0007030 Simmondsia chinensis HOM05D004631 ORTHO05D005223 7.4e-12 75.1 192 31.2
PSO063G4908 Papaver somniferum HOM05D004631 ORTHO05D005223 9.6e-12 74.7 248 28.2
TAR629G3282 Trochodendron aralioides HOM05D004631 ORTHO05D005223 1.3e-11 74.3 173 31.8
ClCG11G006850 Citrullus lanatus HOM05D004631 ORTHO05D005223 1.6e-11 73.9 281 27.8
Gohir.D10G085100 Gossypium hirsutum HOM05D004631 ORTHO05D005223 1.6e-11 73.9 195 29.7
Sed0000329 Sechium edule HOM05D004631 ORTHO05D005223 1.6e-11 73.9 192 30.2
Dinv33383 Davidia involucrata HOM05D004631 ORTHO05D005223 2.1e-11 73.6 178 32.0
Gohir.D04G079800 Gossypium hirsutum HOM05D004631 ORTHO05D005223 2.1e-11 73.6 248 29.0
HPP92_028037 Vanilla planifolia HOM05D004631 ORTHO05D005223 2.1e-11 73.6 243 28.8
PSO782G2324 Papaver somniferum HOM05D004631 ORTHO05D005223 3.6e-11 72.8 249 29.7
Gorai.011G093000 Gossypium raimondii HOM05D004631 ORTHO05D005223 4.8e-11 72.4 195 30.3
Lsat_1_v5_gn_4_185741 Lactuca sativa HOM05D004631 ORTHO05D005223 4.8e-11 72.4 248 28.6
EL10Ac5g10455 Beta vulgaris HOM05D004631 ORTHO05D005223 6.2e-11 72.0 252 27.0
AUR62011927 Chenopodium quinoa HOM05D004631 ORTHO05D005223 1.1e-10 71.2 200 29.5
AUR62032242 Chenopodium quinoa HOM05D004631 ORTHO05D005223 1.1e-10 71.2 200 29.5
Gorai.012G089800 Gossypium raimondii HOM05D004631 ORTHO05D005223 1.1e-10 71.2 249 28.1
Dinv25693 Davidia involucrata HOM05D004631 ORTHO05D005223 1.8e-10 70.5 203 28.1
Duzib264G0826 Durio zibethinus HOM05D004631 ORTHO05D005223 3.1e-10 69.7 246 26.0
Gohir.A05G341700 Gossypium hirsutum HOM05D004631 ORTHO05D005223 4.0e-10 69.3 173 30.1
DCAR_011290 Daucus carota HOM05D004631 ORTHO05D005223 5.3e-10 68.9 248 27.4
Gohir.A10G160500 Gossypium hirsutum HOM05D004631 ORTHO05D005223 5.3e-10 68.9 255 27.5
Oeu050430.2 Olea europaea HOM05D004631 ORTHO05D005223 5.3e-10 68.9 286 25.2
Lj1g0026695 Lotus japonicus HOM05D004631 ORTHO05D005223 9.0e-10 68.2 196 30.1
TPR.G2332 Trifolium pratense HOM05D004631 ORTHO05D005223 1.5e-09 67.4 150 29.3
Zm00001eb425170 Zea mays HOM05D004631 ORTHO05D005223 1.5e-09 67.4 216 32.4
Actinidia05943 Actinidia chinensis HOM05D000918 ORTHO05D000791 2.6e-09 66.6 187 31.6
MD10G1138200 Malus domestica HOM05D004631 ORTHO05D005223 5.8e-09 65.5 122 34.4
ECA232G0338 Erigeron canadensis HOM05D004631 ORTHO05D005223 4.9e-08 62.4 247 25.5
Os04g0485200 Oryza sativa ssp. japonica HOM05D004631 ORTHO05D005223 8.4e-08 61.6 221 29.4
SalBow1G0328 Salvia bowleyana HOM05D004631 ORTHO05D005223 8.4e-08 61.6 98 39.8
Prupe.8G176800 Prunus persica HOM05D004631 ORTHO05D005223 1.4e-07 60.8 130 33.8
CARHR148590 Cardamine hirsuta HOM05D004631 ORTHO05D005223 2.4e-07 60.1 101 37.6
Ciclev10003548m.g Citrus clementina HOM05D004631 ORTHO05D005223 2.4e-07 60.1 186 30.1
Zm00001eb079230 Zea mays HOM05D004631 ORTHO05D005223 3.2e-07 59.7 204 29.4
MELO3C008218.2 Cucumis melo HOM05D004631 ORTHO05D005223 5.5e-07 58.9 175 32.0
Oeu058758.2 Olea europaea HOM05D004631 ORTHO05D005223 7.1e-07 58.5 129 31.8
Migut.H00060 Erythranthe guttata HOM05D004631 ORTHO05D005223 4.6e-06 55.8 111 36.9


User provided reference genes

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