Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 3.0e-126 455.3 244 100.0
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 1.2e-23 114.4 228 38.6
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 2.1e-23 113.6 212 38.2
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 4.7e-23 112.5 227 36.6
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 8.0e-23 111.7 223 36.8
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 3.1e-22 109.8 214 36.4
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 3.1e-22 109.8 164 42.1
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 3.1e-22 109.8 224 36.6
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 5.2e-22 109.0 217 35.0
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 6.8e-22 108.6 232 33.2
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 1.2e-21 107.8 215 36.7
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 1.5e-21 107.5 174 42.5
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 1.5e-21 107.5 211 36.5
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 2.6e-21 106.7 230 33.5
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 3.4e-21 106.3 174 40.8
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 3.4e-21 106.3 158 43.7
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 4.4e-21 105.9 161 42.2
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 4.4e-21 105.9 224 33.9
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 7.5e-21 105.1 233 34.3
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 7.5e-21 105.1 162 42.0
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 7.5e-21 105.1 216 36.6
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 7.5e-21 105.1 213 35.7
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 9.8e-21 104.8 152 44.7
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 9.8e-21 104.8 213 35.7
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 1.7e-20 104.0 213 34.7
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 1.7e-20 104.0 154 44.2
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 2.2e-20 103.6 154 44.2
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 2.2e-20 103.6 213 34.3
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 2.2e-20 103.6 213 34.3
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 2.2e-20 103.6 211 37.4
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 2.2e-20 103.6 155 41.9
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 3.7e-20 102.8 230 34.3
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 3.7e-20 102.8 157 40.8
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 6.4e-20 102.1 209 35.4
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 6.4e-20 102.1 213 36.6
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 8.3e-20 101.7 152 44.1
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 1.4e-19 100.9 216 33.8
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.4e-19 100.9 157 42.0
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 1.4e-19 100.9 155 43.2
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 1.9e-19 100.5 232 32.8
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.9e-19 100.5 157 42.0
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 2.4e-19 100.1 213 35.2
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 4.1e-19 99.4 155 39.4
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 4.1e-19 99.4 157 41.4
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 4.1e-19 99.4 166 41.6
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 5.4e-19 99.0 219 36.1
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 5.4e-19 99.0 224 33.0
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 7.0e-19 98.6 211 34.1
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 7.0e-19 98.6 145 43.4
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 7.0e-19 98.6 209 34.0
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 7.0e-19 98.6 151 43.0
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 7.0e-19 98.6 166 41.0
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 1.2e-18 97.8 217 34.1
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 1.2e-18 97.8 218 34.4
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 1.6e-18 97.4 224 32.6
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 1.6e-18 97.4 218 34.4
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 2.1e-18 97.1 230 33.0
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 2.1e-18 97.1 167 41.3
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 2.7e-18 96.7 176 40.9
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 3.5e-18 96.3 152 40.8
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 3.5e-18 96.3 211 35.5
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 4.6e-18 95.9 209 34.9
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 4.6e-18 95.9 218 34.4
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 6.0e-18 95.5 230 33.0
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 6.0e-18 95.5 262 32.4
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 7.8e-18 95.1 219 32.4
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 7.8e-18 95.1 209 34.0
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 7.8e-18 95.1 152 39.5
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 7.8e-18 95.1 210 34.8
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.0e-17 94.7 209 34.4
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 1.3e-17 94.4 156 43.6
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 2.3e-17 93.6 159 36.5
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 2.3e-17 93.6 219 32.9
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 2.3e-17 93.6 157 41.4
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 3.0e-17 93.2 150 42.0
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 3.9e-17 92.8 212 32.5
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 3.9e-17 92.8 170 37.1
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 3.9e-17 92.8 158 39.9
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 5.1e-17 92.4 242 30.6
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 5.1e-17 92.4 152 38.2
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 8.6e-17 91.7 237 28.7
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 2.5e-16 90.1 208 33.2
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 2.5e-16 90.1 230 34.8
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 3.3e-16 89.7 141 42.6
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 4.3e-16 89.4 152 38.8
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 4.3e-16 89.4 219 35.2
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 9.5e-16 88.2 182 36.8
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 1.6e-15 87.4 186 36.0
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 1.6e-15 87.4 148 40.5
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 2.8e-15 86.7 220 33.6
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 8.1e-15 85.1 238 30.3
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 8.1e-15 85.1 148 38.5
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.4e-14 84.3 209 33.5
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 3.1e-14 83.2 94 50.0
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 8.9e-14 81.6 230 27.8
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 1.2e-13 81.3 248 30.2
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 1.2e-13 81.3 248 29.4
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 2.0e-13 80.5 242 29.8
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 4.4e-13 79.3 94 44.7
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 9.9e-13 78.2 91 49.5
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 1.3e-12 77.8 199 35.2
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 3.7e-12 76.3 215 30.7
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 2.4e-11 73.6 79 48.1
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 2.4e-11 73.6 179 34.6
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 1.2e-10 71.2 120 36.7
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 1.6e-10 70.9 137 35.8
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 2.1e-10 70.5 137 35.0
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.5e-10 69.7 75 48.0
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 3.5e-10 69.7 137 35.0
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 6.0e-10 68.9 75 48.0
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 7.8e-10 68.6 108 38.9
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.1e-08 64.7 75 45.3
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 1.9e-08 63.9 126 35.7
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.9e-08 63.9 109 36.7
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 2.5e-08 63.5 144 32.6
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.4e-06 57.8 134 32.8


User provided reference genes

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