Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 8.6e-202 706.8 372 100.0
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 4.7e-99 365.5 337 57.6
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 5.8e-97 358.6 313 58.1
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 4.3e-92 342.4 304 58.9
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 5.2e-90 335.5 341 50.7
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 8.9e-90 334.7 369 48.0
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 1.2e-89 334.3 375 49.1
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 2.0e-89 333.6 368 49.2
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 2.0e-89 333.6 306 55.2
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 1.3e-88 330.9 342 51.2
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 1.7e-88 330.5 316 53.2
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 1.7e-88 330.5 306 54.2
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 2.2e-88 330.1 317 52.7
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 2.2e-88 330.1 319 52.0
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 3.7e-88 329.3 343 50.1
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 8.3e-88 328.2 306 53.9
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 1.9e-87 327.0 343 49.9
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.4e-87 326.6 333 52.3
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 3.2e-87 326.2 340 50.3
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 5.4e-87 325.5 332 50.3
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 1.6e-86 323.9 328 51.2
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 1.6e-86 323.9 331 51.1
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 2.7e-86 323.2 325 50.5
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 4.6e-86 322.4 320 52.5
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 4.6e-86 322.4 337 50.1
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 6.0e-86 322.0 328 50.9
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 7.8e-86 321.6 337 50.1
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 1.0e-85 321.2 315 52.1
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 1.0e-85 321.2 340 49.4
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 2.3e-85 320.1 332 50.3
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 3.9e-85 319.3 331 50.8
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 5.1e-85 318.9 317 50.8
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 6.6e-85 318.5 331 50.8
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 1.5e-84 317.4 330 49.1
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 2.5e-84 316.6 290 55.5
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 2.5e-84 316.6 345 47.8
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.3e-84 316.2 316 50.0
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 5.6e-84 315.5 301 53.2
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 5.6e-84 315.5 334 50.3
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 7.3e-84 315.1 320 50.3
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 7.3e-84 315.1 317 49.8
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 9.5e-84 314.7 331 49.5
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 9.5e-84 314.7 331 49.5
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 1.2e-83 314.3 337 49.0
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 2.1e-83 313.5 339 47.5
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 2.8e-83 313.2 337 48.7
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 2.8e-83 313.2 348 48.3
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 3.6e-83 312.8 327 49.5
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 3.6e-83 312.8 330 49.7
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 3.6e-83 312.8 340 49.7
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 3.6e-83 312.8 340 48.5
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 4.7e-83 312.4 302 52.3
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 4.7e-83 312.4 362 46.7
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 4.7e-83 312.4 367 45.5
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 4.7e-83 312.4 361 47.6
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 8.1e-83 311.6 332 49.1
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 8.1e-83 311.6 329 46.8
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 8.1e-83 311.6 334 48.5
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 8.1e-83 311.6 316 49.4
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.4e-82 310.8 332 49.4
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 1.4e-82 310.8 374 45.7
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 1.8e-82 310.5 362 46.4
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 1.8e-82 310.5 375 44.0
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 2.3e-82 310.1 375 44.0
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 4.0e-82 309.3 332 49.1
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 8.9e-82 308.1 320 49.4
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 1.2e-81 307.8 334 47.0
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.5e-81 307.4 332 47.9
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 1.5e-81 307.4 375 43.2
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 3.4e-81 306.2 327 48.9
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 4.4e-81 305.8 318 48.7
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 7.6e-81 305.1 327 48.6
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 7.6e-81 305.1 304 50.0
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 1.3e-80 304.3 376 43.9
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 1.3e-80 304.3 339 47.8
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.3e-80 304.3 383 43.6
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.7e-80 303.9 300 51.7
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 2.4e-79 300.1 303 50.2
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 9.2e-79 298.1 338 48.2
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 3.5e-78 296.2 315 48.3
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 4.6e-78 295.8 340 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.0e-78 295.4 311 50.8
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 6.0e-78 295.4 310 48.1
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 2.3e-77 293.5 413 40.2
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 6.6e-77 292.0 283 50.2
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 8.1e-75 285.0 329 45.3
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 1.8e-74 283.9 341 45.7
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 3.1e-74 283.1 339 46.9
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 9.0e-74 281.6 341 45.7
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 8.4e-72 275.0 301 48.2
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.2e-71 272.7 255 54.1
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 4.6e-70 269.2 332 45.2
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 5.6e-68 262.3 250 53.6
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 6.2e-67 258.8 302 46.4
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 5.3e-66 255.8 264 48.1
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 1.2e-65 254.6 290 47.6
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 4.9e-64 249.2 250 51.2
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 8.4e-64 248.4 313 44.7
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 3.2e-63 246.5 291 46.0
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.2e-62 244.6 317 42.3
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.4e-55 220.3 306 39.9
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 5.5e-55 219.2 217 50.2
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 2.1e-54 217.2 249 45.4
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 1.0e-53 214.9 194 56.7
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 3.9e-53 213.0 294 41.5
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 4.8e-51 206.1 274 43.8
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.4e-50 204.5 226 50.0
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 6.9e-50 202.2 231 46.8
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 3.4e-49 199.9 268 43.3
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.0e-48 198.4 279 36.9
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 2.2e-48 197.2 184 54.3
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 3.3e-44 183.3 249 43.8
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.2e-41 174.9 159 54.7
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 5.9e-41 172.6 158 55.7
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 4.6e-38 162.9 138 58.7
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.3e-35 154.8 332 34.0
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 1.1e-18 98.6 120 45.8
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 4.1e-18 96.7 232 34.5
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 7.0e-18 95.9 129 42.6
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 9.1e-18 95.5 81 61.7
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.2e-16 90.9 81 58.0
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 4.1e-10 70.1 221 28.5
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 1.5e-07 61.6 62 48.4


User provided reference genes

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