Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 3.5e-109 398.3 199 100.0
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 2.3e-52 209.5 165 60.0
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 2.3e-52 209.5 165 60.0
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 2.3e-52 209.5 165 60.0
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 8.8e-52 207.6 165 60.0
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 4.4e-51 205.3 165 58.8
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 5.7e-51 204.9 162 59.9
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 5.7e-51 204.9 162 59.9
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 7.4e-51 204.5 166 56.0
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 2.8e-50 202.6 178 53.9
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 2.8e-50 202.6 166 56.0
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 2.8e-50 202.6 165 58.2
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 6.3e-50 201.4 162 58.6
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 8.2e-50 201.1 166 56.0
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 1.1e-49 200.7 168 54.8
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 1.1e-49 200.7 166 55.4
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 1.1e-49 200.7 171 52.6
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 1.4e-49 200.3 167 55.7
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 1.4e-49 200.3 163 54.6
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 1.4e-49 200.3 163 54.6
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 1.8e-49 199.9 180 51.7
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 2.4e-49 199.5 164 56.1
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 2.4e-49 199.5 166 54.8
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 3.1e-49 199.1 162 58.0
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 3.1e-49 199.1 163 57.7
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 4.1e-49 198.7 166 56.0
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 4.1e-49 198.7 164 53.7
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 4.1e-49 198.7 166 53.6
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 4.1e-49 198.7 160 57.5
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 4.1e-49 198.7 163 55.8
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 4.1e-49 198.7 165 55.8
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 5.3e-49 198.4 167 55.7
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 5.3e-49 198.4 166 56.6
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 5.3e-49 198.4 166 56.0
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 5.3e-49 198.4 161 56.5
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 7.0e-49 198.0 163 55.2
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 7.0e-49 198.0 168 54.8
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 7.0e-49 198.0 159 56.6
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 7.0e-49 198.0 166 53.6
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 9.1e-49 197.6 164 57.3
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 1.6e-48 196.8 165 55.8
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 1.6e-48 196.8 166 54.2
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 1.6e-48 196.8 164 55.5
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 1.6e-48 196.8 169 53.8
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 2.0e-48 196.4 166 54.8
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 2.0e-48 196.4 161 55.3
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 2.0e-48 196.4 165 53.9
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 2.6e-48 196.1 171 54.4
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 2.6e-48 196.1 171 54.4
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 2.6e-48 196.1 161 55.9
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 3.5e-48 195.7 166 53.0
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 3.5e-48 195.7 166 54.8
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 3.5e-48 195.7 169 53.3
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 4.5e-48 195.3 165 53.9
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 5.9e-48 194.9 164 55.5
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 5.9e-48 194.9 166 54.8
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 5.9e-48 194.9 166 53.6
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 7.7e-48 194.5 164 53.7
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 7.7e-48 194.5 161 55.9
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 7.7e-48 194.5 164 53.0
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 1.3e-47 193.7 163 54.6
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 1.3e-47 193.7 161 53.4
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 1.3e-47 193.7 165 54.5
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 1.3e-47 193.7 164 53.7
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 1.3e-47 193.7 169 54.4
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 1.3e-47 193.7 165 55.8
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 2.2e-47 193.0 168 55.4
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 2.2e-47 193.0 163 54.6
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 2.2e-47 193.0 171 52.0
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 2.9e-47 192.6 161 52.8
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 5.0e-47 191.8 167 52.1
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 5.0e-47 191.8 170 52.4
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 8.5e-47 191.0 157 56.1
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 1.1e-46 190.7 161 55.3
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 1.1e-46 190.7 166 53.0
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 1.1e-46 190.7 168 54.8
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 1.5e-46 190.3 161 54.0
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 1.5e-46 190.3 170 52.9
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 1.9e-46 189.9 166 51.8
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 1.9e-46 189.9 164 53.0
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 1.9e-46 189.9 171 51.5
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 1.9e-46 189.9 165 55.2
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 1.9e-46 189.9 165 54.5
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 5.5e-46 188.3 163 52.8
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 7.2e-46 188.0 163 53.4
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 9.4e-46 187.6 168 52.4
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 9.4e-46 187.6 164 53.7
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 9.4e-46 187.6 166 52.4
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 1.2e-45 187.2 163 50.9
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.6e-45 186.8 161 52.8
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 1.6e-45 186.8 168 52.4
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 2.1e-45 186.4 163 50.3
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 3.6e-45 185.7 165 52.1
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 5.2e-44 181.8 164 55.5
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 6.7e-44 181.4 162 52.5
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 2.2e-42 176.4 155 55.5
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 1.1e-41 174.1 163 50.9
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 5.3e-41 171.8 132 59.1
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 7.0e-41 171.4 161 49.1
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 3.5e-40 169.1 136 55.9
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 2.2e-39 166.4 186 42.5
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 4.7e-37 158.7 125 59.2
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.4e-33 147.1 143 47.6
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 1.7e-31 140.2 125 52.8
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 3.2e-30 136.0 91 64.8
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 1.5e-27 127.1 115 51.3
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 4.1e-25 119.0 114 50.0
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 7.0e-25 118.2 132 47.0
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 2.7e-24 116.3 118 50.0
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 3.5e-24 115.9 189 35.4
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 4.5e-24 115.5 111 51.4
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 3.8e-23 112.5 165 37.0
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 8.6e-23 111.3 105 50.5
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 1.1e-22 110.9 111 48.6
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 3.3e-22 109.4 115 48.7
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 1.2e-19 100.9 153 37.9
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 1.7e-15 87.0 67 61.2
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 1.2e-13 80.9 53 69.8
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 1.2e-13 80.9 53 69.8
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 2.0e-11 73.6 50 60.0
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 3.4e-11 72.8 53 60.4
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 2.9e-10 69.7 54 57.4


User provided reference genes

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