Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0189 Selaginella moellendorffii HOM05D033451 ORTHO05D378547 4.7e-219 764.2 381 100.0
SMO361G0140 Selaginella moellendorffii HOM05D033451 ORTHO05D374470 2.0e-182 642.5 372 86.3
SMO361G0511 Selaginella moellendorffii HOM05D033451 ORTHO05D376155 2.0e-182 642.5 372 86.3
CARHR033750 Cardamine hirsuta HOM05D000903 ORTHO05D000731 5.3e-13 79.7 334 24.6
Aa31LG6G8370 Aethionema arabicum HOM05D000903 ORTHO05D000731 2.0e-12 77.8 331 24.2
Gohir.D06G148900 Gossypium hirsutum HOM05D000903 ORTHO05D000731 5.8e-12 76.3 223 29.1
AL1G48840 Arabidopsis lyrata HOM05D000903 ORTHO05D000731 7.6e-12 75.9 327 24.8
Gorai.010G173400 Gossypium raimondii HOM05D000903 ORTHO05D000731 7.6e-12 75.9 223 29.6
Gohir.A06G143400 Gossypium hirsutum HOM05D000903 ORTHO05D000731 1.7e-11 74.7 223 29.1
CANSAT25G3349 Cannabis sativa HOM05D000903 ORTHO05D000731 2.2e-11 74.3 222 27.5
THA.LOC104825128 Tarenaya hassleriana HOM05D000903 ORTHO05D000731 2.2e-11 74.3 248 25.8
AT1G34260 Arabidopsis thaliana HOM05D000903 ORTHO05D000731 2.9e-11 73.9 327 24.5
Sed0008403 Sechium edule HOM05D000903 ORTHO05D000731 2.9e-11 73.9 229 27.9
Carub.0001s3240 Capsella rubella HOM05D000903 ORTHO05D000731 1.4e-10 71.6 342 24.3
Actinidia23310 Actinidia chinensis HOM05D000903 ORTHO05D000731 2.5e-10 70.9 306 24.5
MELO3C024309.2 Cucumis melo HOM05D000903 ORTHO05D000731 2.5e-10 70.9 229 27.5
Rhsim09G0098100 Rhododendron simsii HOM05D000903 ORTHO05D000731 3.2e-10 70.5 228 27.6
SMO145G0274 Selaginella moellendorffii HOM05D000903 ORTHO05D374900 4.2e-10 70.1 205 28.3
GSVIVG01036852001 Vitis vinifera HOM05D000903 ORTHO05D000731 4.2e-10 70.1 222 26.6
Ciclev10027324m.g Citrus clementina HOM05D000903 ORTHO05D000731 5.5e-10 69.7 235 26.8
SalBow6G0379 Salvia bowleyana HOM05D000903 ORTHO05D000731 5.5e-10 69.7 288 24.0
Cfa018223 Carpinus fangiana HOM05D000903 ORTHO05D000731 7.2e-10 69.3 226 26.5
ClCG09G001370 Citrullus lanatus HOM05D000903 ORTHO05D000731 7.2e-10 69.3 229 27.5
CsaV3_7G033960 Cucumis sativus L. HOM05D000903 ORTHO05D000731 7.2e-10 69.3 229 27.1
Sc23g0001030 Simmondsia chinensis HOM05D000903 ORTHO05D000731 7.2e-10 69.3 301 23.3
FvH4_2g12440 Fragaria vesca HOM05D000903 ORTHO05D000731 2.1e-09 67.8 221 25.3
FAN24G0341 Fragaria x ananassa HOM05D000903 ORTHO05D000731 2.1e-09 67.8 221 25.3
Gorai.009G261700 Gossypium raimondii HOM05D000903 ORTHO05D000731 2.1e-09 67.8 287 24.4
Ah.08g217350 Amaranthus hybridus HOM05D000903 ORTHO05D000731 2.7e-09 67.4 225 28.0
FAN27G1053 Fragaria x ananassa HOM05D000903 ORTHO05D000731 3.5e-09 67.0 221 25.3
QL02p034792 Quercus lobata HOM05D000903 ORTHO05D000731 3.5e-09 67.0 260 26.2
RcHm_v2.0_Chr6g0272731 Rosa chinensis HOM05D000903 ORTHO05D000731 3.5e-09 67.0 221 25.3
TAR371G0678 Trochodendron aralioides HOM05D000903 ORTHO05D000731 3.5e-09 67.0 236 25.0
CSS0012250 Camellia sinensis var. sinensis HOM05D000903 ORTHO05D000731 4.6e-09 66.6 242 28.5
Sed0027174 Sechium edule HOM05D000903 ORTHO05D000731 4.6e-09 66.6 229 26.6
Cc00_g09700 Coffea canephora HOM05D000903 ORTHO05D000731 6.1e-09 66.2 294 24.8
vmacro10641 Vaccinium macrocarpon HOM05D000903 ORTHO05D000731 6.1e-09 66.2 218 27.5
ECA234G4096 Erigeron canadensis HOM05D000903 ORTHO05D000731 7.9e-09 65.9 238 26.1
Gohir.D05G250300 Gossypium hirsutum HOM05D000903 ORTHO05D000731 7.9e-09 65.9 223 26.5
MD10G1044100 Malus domestica HOM05D000903 ORTHO05D000731 7.9e-09 65.9 293 22.2
Gorai.006G132400 Gossypium raimondii HOM05D000903 ORTHO05D000731 1.0e-08 65.5 223 26.0
Duzib177G1160 Durio zibethinus HOM05D000903 ORTHO05D000731 1.3e-08 65.1 287 24.0
Duzib251G0517 Durio zibethinus HOM05D000903 ORTHO05D000731 1.3e-08 65.1 236 25.0
Gohir.D09G114500 Gossypium hirsutum HOM05D000903 ORTHO05D000731 1.3e-08 65.1 223 26.0
Duzib116G0644 Durio zibethinus HOM05D000903 ORTHO05D000731 1.8e-08 64.7 220 26.8
CiPaw.15G006800 Carya illinoinensis HOM05D000903 ORTHO05D000731 2.3e-08 64.3 226 25.2
Ah.05g172800 Amaranthus hybridus HOM05D000903 ORTHO05D000731 3.0e-08 63.9 225 25.8
MD00G1078100 Malus domestica HOM05D000903 ORTHO05D000731 3.0e-08 63.9 221 24.0
TWI32G0256 Tripterygium wilfordii HOM05D000903 ORTHO05D000731 3.0e-08 63.9 259 25.1
Gohir.A05G248900 Gossypium hirsutum HOM05D000903 ORTHO05D000731 3.9e-08 63.5 223 26.0
Sabra19G0097400 Salix brachista HOM05D000903 ORTHO05D000731 3.9e-08 63.5 219 24.7
SalBow7G2868 Salvia bowleyana HOM05D000903 ORTHO05D000731 3.9e-08 63.5 222 26.1
EL10Ac1g00052 Beta vulgaris HOM05D000903 ORTHO05D000731 5.1e-08 63.2 225 25.3
HanXRQChr12g0377601 Helianthus annuus HOM05D000903 ORTHO05D000731 5.1e-08 63.2 234 25.2
DCAR_024783 Daucus carota HOM05D000903 ORTHO05D000731 6.7e-08 62.8 216 27.3
Oeu000947.1 Olea europaea HOM05D000903 ORTHO05D000731 6.7e-08 62.8 229 27.5
MELO3C013178.2 Cucumis melo HOM05D000903 ORTHO05D000731 8.7e-08 62.4 225 24.0
ECA247G1704 Erigeron canadensis HOM05D000903 ORTHO05D000731 8.7e-08 62.4 232 25.4
Prupe.8G050600 Prunus persica HOM05D000903 ORTHO05D000731 8.7e-08 62.4 221 24.4
THA.LOC104810391 Tarenaya hassleriana HOM05D000903 ORTHO05D000731 8.7e-08 62.4 231 26.4
Ciclev10000021m.g Citrus clementina HOM05D000903 ORTHO05D000731 1.1e-07 62.0 226 24.8
Migut.N03335 Erythranthe guttata HOM05D000903 ORTHO05D000731 1.1e-07 62.0 223 27.4
Lj4A518G42 Lonicera japonica HOM05D000903 ORTHO05D000731 1.5e-07 61.6 279 22.6
Oeu045875.1 Olea europaea HOM05D000903 ORTHO05D000731 1.5e-07 61.6 201 25.9
THA.LOC104816059 Tarenaya hassleriana HOM05D000903 ORTHO05D000731 1.5e-07 61.6 231 26.0
Aqoxy3G00141 Aquilegia oxysepala HOM05D000903 ORTHO05D000731 1.9e-07 61.2 218 26.1
MD09G1173300 Malus domestica HOM05D000903 ORTHO05D000731 1.9e-07 61.2 229 26.2
CsaV3_7G021690 Cucumis sativus L. HOM05D000903 ORTHO05D000731 2.5e-07 60.8 226 23.5
ClCG09G010680 Citrullus lanatus HOM05D000903 ORTHO05D000731 4.3e-07 60.1 225 23.6
MSTRG.1492 Avicennia marina HOM05D000903 ORTHO05D000731 5.7e-07 59.7 223 26.0
Migut.C01203 Erythranthe guttata HOM05D000903 ORTHO05D000731 5.7e-07 59.7 241 24.5
Potri.019G087000 Populus trichocarpa HOM05D000903 ORTHO05D000731 5.7e-07 59.7 242 24.0
unitig_26.g8916 Utricularia gibba HOM05D000903 ORTHO05D000731 7.4e-07 59.3 295 23.1
CDE06G1292 Ceratophyllum demersum HOM05D000903 ORTHO05D000731 1.3e-06 58.5 200 25.5
Mapoly0031s0140 Marchantia polymorpha HOM05D000903 ORTHO05D000731 1.3e-06 58.5 218 27.5
MCO13G636 Micromonas commoda HOM05D000903 ORTHO05D000731 1.3e-06 58.5 305 23.9
Cfa026734 Carpinus fangiana HOM05D000903 ORTHO05D000731 1.6e-06 58.2 220 24.5
THA.LOC104807025 Tarenaya hassleriana HOM05D000903 ORTHO05D000731 1.6e-06 58.2 279 24.0
CBR_g4068 Chara braunii HOM05D000903 ORTHO05D000731 2.8e-06 57.4 277 24.5
Lsat_1_v5_gn_4_135081 Lactuca sativa HOM05D000903 ORTHO05D000731 6.3e-06 56.2 225 24.4
Pp3c14_13540 Physcomitrium patens HOM05D000903 ORTHO05D000731 8.2e-06 55.8 260 23.1


User provided reference genes

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