Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 4.1e-122 441.4 225 100.0
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.6e-121 439.5 225 99.1
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 3.5e-57 225.7 226 50.4
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 3.5e-57 225.7 226 48.2
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 3.9e-56 222.2 217 50.7
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 5.1e-56 221.9 217 49.3
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 5.6e-55 218.4 217 49.3
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 7.4e-55 218.0 223 48.4
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 9.6e-55 217.6 226 47.8
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 9.6e-55 217.6 226 47.3
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.3e-54 217.2 224 46.9
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 2.1e-54 216.5 226 47.3
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 2.1e-54 216.5 217 47.5
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 3.6e-54 215.7 226 48.2
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 6.2e-54 214.9 224 50.0
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 1.1e-53 214.2 226 47.8
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 1.4e-53 213.8 221 47.1
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 1.8e-53 213.4 226 46.5
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 1.8e-53 213.4 217 48.4
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 4.0e-53 212.2 226 47.3
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 5.3e-53 211.8 216 48.6
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 5.3e-53 211.8 217 48.8
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 9.0e-53 211.1 216 48.1
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 9.0e-53 211.1 216 48.1
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 1.2e-52 210.7 217 47.9
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.2e-52 210.7 216 47.7
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 1.5e-52 210.3 224 46.9
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 2.6e-52 209.5 226 45.6
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.6e-52 209.5 220 46.4
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.6e-52 209.5 223 46.2
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 2.6e-52 209.5 224 46.4
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 2.6e-52 209.5 226 45.6
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 2.6e-52 209.5 226 46.5
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 3.4e-52 209.1 215 47.0
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 4.5e-52 208.8 226 46.0
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 4.5e-52 208.8 226 45.6
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 7.6e-52 208.0 220 46.4
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 7.6e-52 208.0 226 46.0
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 7.6e-52 208.0 217 46.5
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 7.6e-52 208.0 220 46.8
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 9.9e-52 207.6 226 46.5
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.3e-51 207.2 217 47.9
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 1.7e-51 206.8 217 47.9
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 2.2e-51 206.5 220 46.8
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 2.2e-51 206.5 220 46.8
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 2.2e-51 206.5 220 46.8
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 2.2e-51 206.5 214 48.1
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.2e-51 206.5 226 45.6
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 2.9e-51 206.1 211 47.9
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 2.9e-51 206.1 217 46.1
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 3.8e-51 205.7 210 47.6
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 3.8e-51 205.7 220 45.9
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 3.8e-51 205.7 213 46.5
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 3.8e-51 205.7 217 47.9
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.8e-51 205.7 214 48.1
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 3.8e-51 205.7 217 46.1
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 4.9e-51 205.3 213 47.9
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 4.9e-51 205.3 213 45.5
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 4.9e-51 205.3 217 46.1
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 4.9e-51 205.3 224 45.1
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 6.4e-51 204.9 220 46.4
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 8.4e-51 204.5 224 45.5
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 8.4e-51 204.5 217 47.5
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 8.4e-51 204.5 217 47.5
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 8.4e-51 204.5 214 47.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 1.1e-50 204.1 217 46.1
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 1.1e-50 204.1 217 46.1
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 1.1e-50 204.1 220 45.5
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 1.1e-50 204.1 213 46.9
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.4e-50 203.8 223 44.8
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 1.4e-50 203.8 214 47.2
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.4e-50 203.8 213 46.9
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.4e-50 203.8 224 46.9
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.9e-50 203.4 226 46.0
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 1.9e-50 203.4 217 46.5
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.9e-50 203.4 213 46.0
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.9e-50 203.4 224 45.1
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 2.4e-50 203.0 226 45.6
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.4e-50 203.0 224 44.6
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.4e-50 203.0 224 44.6
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 2.4e-50 203.0 214 46.7
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 3.2e-50 202.6 214 47.7
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 4.2e-50 202.2 226 45.6
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 4.2e-50 202.2 220 44.5
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 5.5e-50 201.8 226 44.2
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 7.1e-50 201.4 226 44.2
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 9.3e-50 201.1 213 46.5
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 9.3e-50 201.1 217 46.5
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 9.3e-50 201.1 213 46.0
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 9.3e-50 201.1 213 46.5
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 9.3e-50 201.1 214 45.8
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.6e-49 200.3 220 45.0
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 1.6e-49 200.3 226 43.8
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.1e-49 199.9 220 44.5
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 2.1e-49 199.9 214 47.2
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 2.1e-49 199.9 214 47.2
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 2.1e-49 199.9 213 46.0
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.1e-49 199.9 220 44.5
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.7e-49 199.5 216 45.4
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.5e-49 199.1 214 46.3
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 3.5e-49 199.1 214 45.3
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 6.0e-49 198.4 215 46.5
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 6.0e-49 198.4 213 45.5
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 7.9e-49 198.0 213 46.5
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.3e-48 197.2 213 46.5
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 2.3e-48 196.4 225 44.4
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 3.0e-48 196.1 213 45.1
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.9e-48 195.7 227 43.6
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 5.1e-48 195.3 217 45.2
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 6.7e-48 194.9 234 43.2
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 6.7e-48 194.9 234 43.2
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 6.7e-48 194.9 226 43.4
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 5.6e-47 191.8 221 42.1
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 3.7e-46 189.1 200 47.0
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 2.4e-45 186.4 214 41.6
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 2.0e-44 183.3 210 42.4
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 3.8e-43 179.1 178 50.0
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 6.5e-43 178.3 178 50.0
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 4.6e-41 172.2 179 47.5
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 3.0e-40 169.5 217 44.7
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 3.3e-39 166.0 161 49.1
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 7.4e-39 164.9 147 55.1
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 6.3e-38 161.8 155 48.4
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 5.9e-36 155.2 215 40.9
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.2e-35 153.3 151 47.7
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 3.8e-35 152.5 137 53.3
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 5.0e-35 152.1 225 39.1
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 3.2e-34 149.4 157 46.5
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 8.7e-32 141.4 141 46.1
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 2.3e-24 116.7 241 34.4
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 3.9e-24 115.9 113 49.6
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 1.5e-23 114.0 113 49.6
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 2.5e-23 113.2 111 48.6
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 3.3e-23 112.8 113 48.7
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 3.3e-23 112.8 113 48.7
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 3.3e-23 112.8 113 48.7
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 3.3e-23 112.8 113 48.7
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 1.3e-22 110.9 111 47.7
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 2.8e-22 109.8 226 31.4
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 1.4e-21 107.5 111 46.8
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 1.8e-21 107.1 91 57.1
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 4.5e-20 102.4 101 48.5
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 4.5e-20 102.4 101 48.5
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 7.2e-18 95.1 125 44.8
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-14 84.0 85 50.6
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.7e-14 84.0 85 50.6
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 2.8e-14 83.2 83 50.6
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.4e-13 80.1 111 41.4
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 2.6e-12 76.6 107 37.4
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.1e-10 71.2 63 47.6
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 1.9e-10 70.5 226 25.7
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 5.5e-10 68.9 64 50.0
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 7.2e-10 68.6 217 25.8
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 1.4e-08 64.3 226 23.9
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 5.2e-08 62.4 215 24.7
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 8.8e-08 61.6 61 49.2
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 9.7e-07 58.2 51 51.0
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 2.8e-06 56.6 68 44.1


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