Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0105 Selaginella moellendorffii HOM05D005152 ORTHO05D006162 0.0e+00 1298.1 671 100.0
Mapoly0027s0150 Marchantia polymorpha HOM05D005152 ORTHO05D006162 1.1e-56 225.7 771 29.8
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis HOM05D005152 ORTHO05D006162 5.2e-56 223.4 755 28.1
Pp3c5_25710 Physcomitrium patens HOM05D005152 ORTHO05D006162 4.7e-49 200.3 575 28.3
SEGI_04037 Sequoiadendron giganteum HOM05D005152 ORTHO05D006162 3.7e-46 190.7 564 28.4
Pp3c25_13080 Physcomitrium patens HOM05D005152 ORTHO05D006162 1.5e-42 178.7 460 28.3
Aqoxy1G00386 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 8.1e-41 172.9 578 25.4
Lj2C487T6 Lonicera japonica HOM05D005152 ORTHO05D006162 1.4e-40 172.2 687 25.5
RcHm_v2.0_Chr7g0223811 Rosa chinensis HOM05D005152 ORTHO05D006162 6.8e-40 169.9 564 25.7
vmacro12803 Vaccinium macrocarpon HOM05D005152 ORTHO05D006162 2.0e-39 168.3 701 23.5
CANSAT11G0534 Cannabis sativa HOM05D005152 ORTHO05D006162 3.4e-39 167.5 554 26.4
TWI75G0576 Tripterygium wilfordii HOM05D005152 ORTHO05D006162 7.6e-39 166.4 685 25.0
Potri.009G067800 Populus trichocarpa HOM05D005152 ORTHO05D006162 9.9e-39 166.0 691 24.6
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 1.3e-38 165.6 580 25.7
QL01p016753 Quercus lobata HOM05D005152 ORTHO05D006162 4.9e-38 163.7 571 25.9
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 8.4e-38 162.9 536 26.3
ATR1096G100 Amborella trichopoda HOM05D005152 ORTHO05D006162 1.1e-37 162.5 553 26.0
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 1.1e-37 162.5 585 25.6
DCAR_002098 Daucus carota HOM05D005152 ORTHO05D006162 2.4e-37 161.4 514 26.5
FAN08G2618 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.4e-37 161.4 599 25.5
FvH4_5g29960 Fragaria vesca HOM05D005152 ORTHO05D006162 3.2e-37 161.0 602 25.9
Manes.02G136600 Manihot esculenta HOM05D005152 ORTHO05D006162 3.2e-37 161.0 420 29.3
Lsat_1_v5_gn_2_33000 Lactuca sativa HOM05D005152 ORTHO05D006162 4.2e-37 160.6 588 26.4
Prupe.3G132200 Prunus persica HOM05D005152 ORTHO05D006162 5.4e-37 160.2 412 28.2
Sed0006572 Sechium edule HOM05D005152 ORTHO05D006162 7.1e-37 159.8 688 26.2
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 2.1e-36 158.3 648 24.1
PSO339G4523 Papaver somniferum HOM05D005152 ORTHO05D006162 2.7e-36 157.9 345 31.3
Rhsim13G0207600 Rhododendron simsii HOM05D005152 ORTHO05D006162 3.5e-36 157.5 315 31.4
FAN04G0382 Fragaria x ananassa HOM05D005152 ORTHO05D006162 6.0e-36 156.8 599 25.5
Haze_23256 Corylus avellana HOM05D005152 ORTHO05D006162 7.8e-36 156.4 589 26.3
Gohir.D03G176100 Gossypium hirsutum HOM05D005152 ORTHO05D006162 1.3e-35 155.6 578 24.6
PSO384G2750 Papaver somniferum HOM05D005152 ORTHO05D006162 1.3e-35 155.6 347 29.4
Potri.001G273600 Populus trichocarpa HOM05D005152 ORTHO05D006162 1.3e-35 155.6 679 23.4
MBI19_g42986_MAGBIO Magnolia biondii HOM05D005152 ORTHO05D006162 1.7e-35 155.2 713 24.1
FAN13G1175 Fragaria x ananassa HOM05D005152 ORTHO05D006162 3.0e-35 154.5 607 25.2
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 3.9e-35 154.1 583 23.7
MD15G1434100 Malus domestica HOM05D005152 ORTHO05D006162 3.9e-35 154.1 588 26.4
Actinidia24470 Actinidia chinensis HOM05D005152 ORTHO05D006162 6.6e-35 153.3 608 24.3
ClCG02G022750 Citrullus lanatus HOM05D005152 ORTHO05D006162 6.6e-35 153.3 545 27.0
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 6.6e-35 153.3 604 25.5
SalBow4G0649 Salvia bowleyana HOM05D005152 ORTHO05D006162 8.7e-35 152.9 618 23.9
Prupe.4G267500 Prunus persica HOM05D005152 ORTHO05D006162 1.9e-34 151.8 584 26.2
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 3.3e-34 151.0 317 30.6
Ciclev10014592m.g Citrus clementina HOM05D005152 ORTHO05D006162 3.3e-34 151.0 574 25.8
Eucgr.J00691 Eucalyptus grandis HOM05D005152 ORTHO05D006162 3.3e-34 151.0 609 25.3
Gorai.003G185300 Gossypium raimondii HOM05D005152 ORTHO05D006162 3.3e-34 151.0 579 24.4
HanXRQChr14g0432261 Helianthus annuus HOM05D005152 ORTHO05D006162 5.6e-34 150.2 594 26.1
THA.LOC104799141 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 5.6e-34 150.2 403 30.0
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 7.3e-34 149.8 283 36.4
Cc02_g30140 Coffea canephora HOM05D005152 ORTHO05D006162 1.3e-33 149.1 311 30.5
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 1.3e-33 149.1 570 24.0
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 2.8e-33 147.9 318 28.3
Migut.A00480 Erythranthe guttata HOM05D005152 ORTHO05D006162 3.6e-33 147.5 697 23.4
Thecc.03G310200 Theobroma cacao HOM05D005152 ORTHO05D006162 3.6e-33 147.5 581 23.9
Cfa009894 Carpinus fangiana HOM05D005152 ORTHO05D006162 4.8e-33 147.1 600 24.0
MELO3C014552.2 Cucumis melo HOM05D005152 ORTHO05D006162 8.1e-33 146.4 534 27.2
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 1.1e-32 146.0 628 25.0
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 1.1e-32 146.0 628 25.0
CsaV3_6G038870 Cucumis sativus L. HOM05D005152 ORTHO05D006162 1.1e-32 146.0 613 26.9
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 1.4e-32 145.6 625 22.7
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 2.4e-32 144.8 169 40.8
COL.COLO4_16941 Corchorus olitorius HOM05D005152 ORTHO05D006162 3.1e-32 144.4 597 24.8
HPP92_019896 Vanilla planifolia HOM05D005152 ORTHO05D006162 4.0e-32 144.1 185 38.4
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 5.3e-32 143.7 572 27.1
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 5.3e-32 143.7 564 23.6
PGR119G0699 Punica granatum HOM05D005152 ORTHO05D006162 5.3e-32 143.7 522 26.1
THA.LOC104816332 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 5.3e-32 143.7 620 25.0
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 6.9e-32 143.3 562 24.6
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 6.9e-32 143.3 159 37.7
VMungo0647G0059 Vigna mungo HOM05D005152 ORTHO05D006162 6.9e-32 143.3 570 24.0
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 9.0e-32 142.9 204 36.3
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 9.0e-32 142.9 624 24.7
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 1.2e-31 142.5 596 24.5
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 1.2e-31 142.5 575 25.2
Gohir.A03G000034 Gossypium hirsutum HOM05D005152 ORTHO05D006162 1.2e-31 142.5 579 23.1
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 1.5e-31 142.1 596 24.8
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 2.6e-31 141.4 584 24.8
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 4.4e-31 140.6 520 24.8
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 4.4e-31 140.6 519 26.0
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 7.6e-31 139.8 202 35.6
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 7.6e-31 139.8 520 24.6
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 7.6e-31 139.8 325 28.3
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 1.3e-30 139.0 202 35.1
MD08G1241200 Malus domestica HOM05D005152 ORTHO05D006162 2.2e-30 138.3 316 29.7
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 3.8e-30 137.5 544 25.9
TPR.G16391 Trifolium pratense HOM05D005152 ORTHO05D006162 3.8e-30 137.5 534 25.1
Lalb_Chr10g0106191 Lupinus albus HOM05D005152 ORTHO05D006162 8.4e-30 136.3 707 23.9
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 1.9e-29 135.2 520 24.8
Sp6g31420 Schrenkiella parvula HOM05D005152 ORTHO05D006162 2.4e-29 134.8 626 24.4
TAR636G3031 Trochodendron aralioides HOM05D005152 ORTHO05D006162 4.2e-29 134.0 552 24.8
Aa31LG3G15010 Aethionema arabicum HOM05D005152 ORTHO05D006162 9.3e-29 132.9 580 23.1
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 9.3e-29 132.9 583 23.5
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 2.1e-28 131.7 585 24.8
Peaxi162Scf00014g00212 Petunia axillaris HOM05D005152 ORTHO05D006162 2.1e-28 131.7 629 23.7
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 3.5e-28 131.0 730 23.2
Atru.chr11.1399 Acer truncatum HOM05D005152 ORTHO05D006162 1.7e-27 128.6 159 37.1
Os12g0189900 Oryza sativa ssp. japonica HOM05D005152 ORTHO05D006162 3.9e-27 127.5 316 28.8
Sabra09G0050800 Salix brachista HOM05D005152 ORTHO05D006162 5.1e-27 127.1 620 23.1
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 1.6e-25 122.1 307 29.0
CDE04G1157 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.1e-24 119.4 570 23.9
unitig_748.g8148 Utricularia gibba HOM05D005152 ORTHO05D006162 1.1e-24 119.4 511 24.5
MCO05G618 Micromonas commoda HOM05D005152 ORTHO05D006162 5.3e-24 117.1 175 37.7
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 5.3e-24 117.1 151 35.8
Sc09g0005740 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.2e-23 115.9 149 38.9
CDE07G1900 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.7e-22 112.1 335 25.4
FAN18G0878 Fragaria x ananassa HOM05D005152 ORTHO05D006162 1.7e-22 112.1 191 35.1
Duzib205G1611 Durio zibethinus HOM05D005152 ORTHO05D006162 1.0e-19 102.8 643 22.1
CiPaw.14G111400 Carya illinoinensis HOM05D005152 ORTHO05D006162 2.8e-17 94.7 483 23.4
Oeu046802.1 Olea europaea HOM05D005152 ORTHO05D006162 3.7e-17 94.4 489 23.5
GSVIVG01029300001 Vitis vinifera HOM05D005152 ORTHO05D006162 1.1e-16 92.8 555 22.9
Cre01.g002201 Chlamydomonas reinhardtii HOM05D005152 ORTHO05D006162 2.4e-16 91.7 241 26.6
Nitab4.5_0000975g0020 Nicotiana tabacum HOM05D005152 ORTHO05D006162 8.4e-14 83.2 314 24.8
SGA_v2.0_scaffold96G29125 Striga asiatica HOM05D005152 ORTHO05D006162 1.9e-13 82.0 122 31.1
CAN.G437.19 Capsicum annuum HOM05D005152 ORTHO05D006162 3.2e-13 81.3 103 38.8
SGA_v2.0_scaffold79G25574 Striga asiatica HOM05D005152 ORTHO05D006162 2.1e-12 78.6 89 37.1
Oeu022376.1 Olea europaea HOM05D005152 ORTHO05D006162 2.5e-10 71.6 235 26.0
Oeu046803.1 Olea europaea HOM05D005152 ORTHO05D006162 3.7e-09 67.8 69 37.7
CBR_g41105 Chara braunii HOM05D001740 ORTHO05D001468 1.0e-06 59.7 108 33.3
Sc09g0005660 Simmondsia chinensis HOM05D005152 ORTHO05D006162 2.2e-06 58.5 56 42.9


User provided reference genes

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