Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0062 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 5.4e-63 244.2 128 100.0
SMO361G0333 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.2e-32 142.5 101 80.2
SMO361G0358 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 7.2e-31 137.5 101 78.2
SMO361G0551 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 6.7e-21 104.4 97 56.7
SEGI_26358 Sequoiadendron giganteum HOM05D004488 ORTHO05D005374 1.6e-14 83.2 101 49.5
vmacro01860 Vaccinium macrocarpon HOM05D004488 ORTHO05D005374 1.7e-11 73.2 96 41.7
Zm00001eb118020 Zea mays HOM05D004488 ORTHO05D005374 8.3e-11 70.9 99 51.5
Duzib132G0794 Durio zibethinus HOM05D004488 ORTHO05D005374 1.4e-10 70.1 103 43.7
TAR381G0147 Trochodendron aralioides HOM05D004488 ORTHO05D005374 1.8e-10 69.7 98 42.9
Potri.017G043200 Populus trichocarpa HOM05D004488 ORTHO05D005374 2.4e-10 69.3 98 44.9
Thecc.02G129200 Theobroma cacao HOM05D004488 ORTHO05D005374 2.4e-10 69.3 98 45.9
MBI16_g12465_MAGBIO Magnolia biondii HOM05D004488 ORTHO05D005374 3.1e-10 68.9 100 44.0
Rhsim11G0142400 Rhododendron simsii HOM05D004488 ORTHO05D005374 3.1e-10 68.9 96 41.7
Actinidia02393 Actinidia chinensis HOM05D004488 ORTHO05D005374 4.1e-10 68.6 96 39.6
ATR0767G217 Amborella trichopoda HOM05D004488 ORTHO05D005374 4.1e-10 68.6 110 43.6
CAN.G997.3 Capsicum annuum HOM05D004488 ORTHO05D005374 4.1e-10 68.6 96 40.6
unitig_0.g894 Utricularia gibba HOM05D004488 ORTHO05D005374 4.1e-10 68.6 96 41.7
Os07g0118300 Oryza sativa ssp. japonica HOM05D004488 ORTHO05D005374 5.4e-10 68.2 99 43.4
TWI14G0417 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 5.4e-10 68.2 96 43.8
Hund00379 Selenicereus undatus HOM05D004488 ORTHO05D005374 7.0e-10 67.8 90 45.6
GSVIVG01015661001 Vitis vinifera HOM05D004488 ORTHO05D005374 7.0e-10 67.8 96 43.8
Glyma.13G256500 Glycine max HOM05D004488 ORTHO05D005374 9.1e-10 67.4 96 42.7
PSO541G1276 Papaver somniferum HOM05D004488 ORTHO05D005374 9.1e-10 67.4 96 43.8
Rhsim11G0140000 Rhododendron simsii HOM05D004488 ORTHO05D005374 9.1e-10 67.4 96 40.6
Atru.chr6.1271 Acer truncatum HOM05D004488 ORTHO05D005374 1.2e-09 67.0 98 41.8
CSS0028940 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 1.2e-09 67.0 96 41.7
DCAR_001857 Daucus carota HOM05D004488 ORTHO05D005374 1.2e-09 67.0 96 45.8
MD10G1054500 Malus domestica HOM05D004488 ORTHO05D005374 1.2e-09 67.0 96 42.7
CSS0006356 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 1.6e-09 66.6 96 38.5
CDE01G0475 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 1.6e-09 66.6 96 41.7
Hund06459 Selenicereus undatus HOM05D004488 ORTHO05D005374 1.6e-09 66.6 96 43.8
CSS0011276 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 2.0e-09 66.2 96 38.5
Hma1.2p1_0908F.1_g235500 Hydrangea macrophylla HOM05D004488 ORTHO05D005374 2.0e-09 66.2 100 41.0
TAR625G0886 Trochodendron aralioides HOM05D004488 ORTHO05D005374 2.0e-09 66.2 97 42.3
Phvul.006G201800 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 2.7e-09 65.9 96 43.8
VMungo0251G0098 Vigna mungo HOM05D004488 ORTHO05D005374 2.7e-09 65.9 96 43.8
Cc02_g20910 Coffea canephora HOM05D004488 ORTHO05D005374 3.5e-09 65.5 96 40.6
Migut.B00550 Erythranthe guttata HOM05D004488 ORTHO05D005374 3.5e-09 65.5 98 41.8
Gohir.D13G049600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 3.5e-09 65.5 98 43.9
Lalb_Chr05g0217811 Lupinus albus HOM05D004488 ORTHO05D005374 3.5e-09 65.5 96 44.8
PSO675G8955 Papaver somniferum HOM05D004488 ORTHO05D005374 3.5e-09 65.5 96 43.8
Peaxi162Scf00299g00625 Petunia axillaris HOM05D004488 ORTHO05D005374 3.5e-09 65.5 96 39.6
Prupe.8G070100 Prunus persica HOM05D004488 ORTHO05D005374 3.5e-09 65.5 96 42.7
HPP92_019609 Vanilla planifolia HOM05D004488 ORTHO05D005374 3.5e-09 65.5 98 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2605 Anthoceros agrestis HOM05D004488 ORTHO05D005374 4.5e-09 65.1 96 42.7
COL.COLO4_32390 Corchorus olitorius HOM05D004488 ORTHO05D005374 4.5e-09 65.1 96 43.8
Manes.07G041900 Manihot esculenta HOM05D004488 ORTHO05D005374 4.5e-09 65.1 98 41.8
THA.LOC104807182 Tarenaya hassleriana HOM05D004488 ORTHO05D005374 4.5e-09 65.1 99 43.4
Actinidia00306 Actinidia chinensis HOM05D004488 ORTHO05D005374 5.9e-09 64.7 96 38.5
Ciclev10029296m.g Citrus clementina HOM05D004488 ORTHO05D005374 5.9e-09 64.7 98 40.8
Gohir.A13G050800 Gossypium hirsutum HOM05D004488 ORTHO05D005374 5.9e-09 64.7 98 43.9
Aqoxy5G01383 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 7.7e-09 64.3 96 43.8
Mapoly0135s0052 Marchantia polymorpha HOM05D004488 ORTHO05D005374 7.7e-09 64.3 96 38.5
CANSAT54G1769 Cannabis sativa HOM05D004488 ORTHO05D005374 1.0e-08 63.9 96 40.6
Lalb_Chr16g0382951 Lupinus albus HOM05D004488 ORTHO05D005374 1.0e-08 63.9 96 44.8
Medtr2g009630 Medicago truncatula HOM05D004488 ORTHO05D005374 1.0e-08 63.9 96 41.7
Sc18g0007070 Simmondsia chinensis HOM05D004488 ORTHO05D005374 1.0e-08 63.9 96 41.7
Aqoxy6G00871 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 1.3e-08 63.5 96 42.7
Eucgr.G00989 Eucalyptus grandis HOM05D004488 ORTHO05D005374 1.3e-08 63.5 96 41.7
CARHR241720 Cardamine hirsuta HOM05D004488 ORTHO05D005374 1.7e-08 63.2 100 39.0
CiPaw.05G029400 Carya illinoinensis HOM05D004488 ORTHO05D005374 1.7e-08 63.2 98 42.9
CDE04G0584 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 1.7e-08 63.2 96 38.5
HanXRQChr16g0514551 Helianthus annuus HOM05D004488 ORTHO05D005374 1.7e-08 63.2 96 39.6
SGA_v2.0_scaffold83G26377 Striga asiatica HOM05D004488 ORTHO05D005374 1.7e-08 63.2 96 38.5
Cpa.g.sc20.3 Carica papaya HOM05D004488 ORTHO05D005374 2.2e-08 62.8 96 42.7
FAN20G0168 Fragaria x ananassa HOM05D004488 ORTHO05D005374 2.2e-08 62.8 96 41.7
Potri.007G115800 Populus trichocarpa HOM05D004488 ORTHO05D005374 2.2e-08 62.8 98 42.9
Sp7g31350 Schrenkiella parvula HOM05D004488 ORTHO05D005374 2.2e-08 62.8 96 39.6
ECA234G4299 Erigeron canadensis HOM05D004488 ORTHO05D005374 2.9e-08 62.4 96 39.6
Lj9A348T63 Lonicera japonica HOM05D004488 ORTHO05D005374 2.9e-08 62.4 96 40.6
MD05G1047700 Malus domestica HOM05D004488 ORTHO05D005374 2.9e-08 62.4 96 39.6
Ah.01g023950 Amaranthus hybridus HOM05D004488 ORTHO05D005374 3.8e-08 62.0 90 44.4
EL10Ac9g22071 Beta vulgaris HOM05D004488 ORTHO05D005374 3.8e-08 62.0 90 43.3
AUR62027109 Chenopodium quinoa HOM05D004488 ORTHO05D005374 3.8e-08 62.0 90 44.4
Dinv16003 Davidia involucrata HOM05D004488 ORTHO05D005374 3.8e-08 62.0 103 43.7
Lsat_1_v5_gn_5_110001 Lactuca sativa HOM05D004488 ORTHO05D005374 3.8e-08 62.0 96 38.5
Lj4g0013422 Lotus japonicus HOM05D004488 ORTHO05D005374 3.8e-08 62.0 98 38.8
Nn5g29881 Nelumbo nucifera HOM05D004488 ORTHO05D005374 3.8e-08 62.0 96 43.8
PGR042G1599 Punica granatum HOM05D004488 ORTHO05D005374 3.8e-08 62.0 98 39.8
PGSC0003DMG400033581 Solanum tuberosum HOM05D004488 ORTHO05D005374 3.8e-08 62.0 96 39.6
Psat1g214000 Pisum sativum HOM05D004488 ORTHO05D005374 5.0e-08 61.6 96 40.6
RcHm_v2.0_Chr6g0270971 Rosa chinensis HOM05D004488 ORTHO05D005374 5.0e-08 61.6 96 41.7
Thhalv10026279m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 6.5e-08 61.2 96 39.6
FvH4_2g11740 Fragaria vesca HOM05D004488 ORTHO05D005374 6.5e-08 61.2 96 40.6
Oeu010528.2 Olea europaea HOM05D004488 ORTHO05D005374 6.5e-08 61.2 100 36.0
Oeu029681.1 Olea europaea HOM05D004488 ORTHO05D005374 8.5e-08 60.8 100 37.0
Solyc01g105980.3 Solanum lycopersicum HOM05D004488 ORTHO05D005374 8.5e-08 60.8 96 38.5
Sopen01g048360 Solanum pennellii HOM05D004488 ORTHO05D005374 8.5e-08 60.8 96 38.5
MSTRG.16621 Avicennia marina HOM05D004488 ORTHO05D005374 1.1e-07 60.5 96 38.5
Actinidia28030 Actinidia chinensis HOM05D004488 ORTHO05D005374 1.5e-07 60.1 96 38.5
Carub.0007s0681 Capsella rubella HOM05D004488 ORTHO05D005374 1.5e-07 60.1 96 38.5
AT4G33625 Arabidopsis thaliana HOM05D004488 ORTHO05D005374 1.9e-07 59.7 96 37.5
Lj6g0006499 Lotus japonicus HOM05D004488 ORTHO05D005374 1.9e-07 59.7 97 42.3
Nn1g05574 Nelumbo nucifera HOM05D004488 ORTHO05D005374 1.9e-07 59.7 86 43.0
AL7G17880 Arabidopsis lyrata HOM05D004488 ORTHO05D005374 2.5e-07 59.3 96 37.5
AUR62012885 Chenopodium quinoa HOM05D004488 ORTHO05D005374 2.5e-07 59.3 90 43.3
FAN24G0482 Fragaria x ananassa HOM05D004488 ORTHO05D005374 2.5e-07 59.3 90 41.1
Sed0014769 Sechium edule HOM05D004488 ORTHO05D005374 2.5e-07 59.3 96 38.5
HanXRQChr10g0289991 Helianthus annuus HOM05D004488 ORTHO05D005374 3.2e-07 58.9 96 37.5
QL11p025232 Quercus lobata HOM05D004488 ORTHO05D005374 3.2e-07 58.9 96 39.6
BcaNung02186 Brassica carinata HOM05D004488 ORTHO05D005374 4.2e-07 58.5 96 37.5
Pp3c4_7970 Physcomitrium patens HOM05D004488 ORTHO05D005374 4.2e-07 58.5 96 38.5
CsaV3_4G014750 Cucumis sativus L. HOM05D004488 ORTHO05D005374 7.2e-07 57.8 96 37.5
Aa31sc21G80 Aethionema arabicum HOM05D004488 ORTHO05D005374 1.2e-06 57.0 92 41.3
ClCG10G009630 Citrullus lanatus HOM05D004488 ORTHO05D005374 1.6e-06 56.6 96 36.5
PSO210G5219 Papaver somniferum HOM05D004488 ORTHO05D005374 1.6e-06 56.6 97 38.1
Pp3c15_10510 Physcomitrium patens HOM05D004488 ORTHO05D005374 1.6e-06 56.6 97 35.1
TPR.G8448 Trifolium pratense HOM05D004488 ORTHO05D005374 1.6e-06 56.6 90 40.0
Pp3c13_16610 Physcomitrium patens HOM05D004488 ORTHO05D005374 2.1e-06 56.2 96 36.5
Haze_10521 Corylus avellana HOM05D004488 ORTHO05D005374 2.7e-06 55.8 83 41.0
CDE02G4257 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 6.1e-06 54.7 87 37.9


User provided reference genes

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