Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO359G0002 Selaginella moellendorffii HOM05D000639 ORTHO05D005966 8.3e-146 520.4 270 100.0
SMO145G0020 Selaginella moellendorffii HOM05D000639 ORTHO05D005966 2.7e-72 276.2 387 49.9
SMO359G0001 Selaginella moellendorffii HOM05D000639 ORTHO05D005966 7.0e-36 155.2 131 64.9
SMO145G0055 Selaginella moellendorffii HOM05D000639 ORTHO05D005966 3.5e-35 152.9 132 62.9
Medtr2g054880 Medicago truncatula HOM05D000639 ORTHO05D005966 1.4e-20 104.4 142 42.3
TPR.G1683 Trifolium pratense HOM05D000639 ORTHO05D005966 1.9e-20 104.0 142 42.3
Psat1g026600 Pisum sativum HOM05D000639 ORTHO05D005966 3.2e-20 103.2 130 43.1
CSS0009692 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D005966 7.1e-20 102.1 130 43.8
Ca_30359_v3 Cicer arietinum L. HOM05D000639 ORTHO05D005966 7.1e-20 102.1 130 43.1
SalBow1G6947 Salvia bowleyana HOM05D000639 ORTHO05D005966 1.2e-19 101.3 130 42.3
CSS0020792 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D005966 1.6e-19 100.9 130 43.1
Lj7A634G25 Lonicera japonica HOM05D000639 ORTHO05D005966 2.1e-19 100.5 130 42.3
GSVIVG01015488001 Vitis vinifera HOM05D000639 ORTHO05D005966 2.7e-19 100.1 130 41.5
Actinidia40445 Actinidia chinensis HOM05D000639 ORTHO05D005966 3.5e-19 99.8 143 39.2
Ciclev10008570m.g Citrus clementina HOM05D000639 ORTHO05D005966 3.5e-19 99.8 130 43.1
Lalb_Chr08g0234841 Lupinus albus HOM05D000639 ORTHO05D005966 3.5e-19 99.8 142 39.4
MD02G1037100 Malus domestica HOM05D000639 ORTHO05D005966 3.5e-19 99.8 142 40.8
Mapoly0090s0014 Marchantia polymorpha HOM05D000639 ORTHO05D005966 3.5e-19 99.8 128 40.6
Rhsim01G0078300 Rhododendron simsii HOM05D000639 ORTHO05D005966 3.5e-19 99.8 130 42.3
Actinidia26410 Actinidia chinensis HOM05D000639 ORTHO05D005966 4.6e-19 99.4 130 42.3
Phvul.009G198900 Phaseolus vulgaris HOM05D000639 ORTHO05D005966 4.6e-19 99.4 130 40.8
CSS0019283 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D005966 6.0e-19 99.0 130 41.5
Haze_25627 Corylus avellana HOM05D000639 ORTHO05D005966 6.0e-19 99.0 142 39.4
ATR0815G030 Amborella trichopoda HOM05D000639 ORTHO05D005966 7.8e-19 98.6 130 40.8
EL10Ac8g18595 Beta vulgaris HOM05D000639 ORTHO05D005966 7.8e-19 98.6 130 40.8
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 7.8e-19 98.6 130 41.5
Eucgr.C01117 Eucalyptus grandis HOM05D000639 ORTHO05D005966 1.0e-18 98.2 142 37.3
Hma1.2p1_0665F.1_g199260 Hydrangea macrophylla HOM05D000639 ORTHO05D005966 1.0e-18 98.2 134 41.0
Lalb_Chr23g0275241 Lupinus albus HOM05D000639 ORTHO05D005966 1.0e-18 98.2 130 41.5
vmacro20652 Vaccinium macrocarpon HOM05D000639 ORTHO05D005966 1.0e-18 98.2 130 41.5
VMungo1309G0730 Vigna mungo HOM05D000639 ORTHO05D005966 1.0e-18 98.2 130 40.8
Glyma.06G215400 Glycine max HOM05D000639 ORTHO05D005966 1.7e-18 97.4 142 37.3
QL02p087443 Quercus lobata HOM05D000639 ORTHO05D005966 1.7e-18 97.4 130 41.5
Hund09153 Selenicereus undatus HOM05D000639 ORTHO05D005966 1.7e-18 97.4 130 41.5
MD15G1177300 Malus domestica HOM05D000639 ORTHO05D005966 3.0e-18 96.7 140 40.0
Solyc08g067050.3 Solanum lycopersicum HOM05D000639 ORTHO05D005966 3.0e-18 96.7 128 39.8
Sopen08g021000 Solanum pennellii HOM05D000639 ORTHO05D005966 3.0e-18 96.7 128 39.8
PGSC0003DMG400023146 Solanum tuberosum HOM05D000639 ORTHO05D005966 3.0e-18 96.7 128 39.8
Atru.chr7.1233 Acer truncatum HOM05D000639 ORTHO05D005966 3.9e-18 96.3 130 40.8
Cfa003336 Carpinus fangiana HOM05D000639 ORTHO05D005966 3.9e-18 96.3 142 38.0
CiPaw.03G240200 Carya illinoinensis HOM05D000639 ORTHO05D005966 3.9e-18 96.3 134 39.6
AUR62033456 Chenopodium quinoa HOM05D000639 ORTHO05D005966 3.9e-18 96.3 130 40.8
Prupe.7G238300 Prunus persica HOM05D000639 ORTHO05D005966 3.9e-18 96.3 142 38.7
RcHm_v2.0_Chr2g0089261 Rosa chinensis HOM05D000639 ORTHO05D005966 3.9e-18 96.3 130 40.8
CAN.G98.20 Capsicum annuum HOM05D000639 ORTHO05D005966 6.6e-18 95.5 128 39.1
Potri.018G071200 Populus trichocarpa HOM05D000639 ORTHO05D005966 6.6e-18 95.5 130 40.8
SGA_v2.0_scaffold8G04290 Striga asiatica HOM05D000639 ORTHO05D005966 6.6e-18 95.5 130 36.9
MELO3C026636.2 Cucumis melo HOM05D000639 ORTHO05D005966 8.6e-18 95.1 142 38.0
Duzib168G1933 Durio zibethinus HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 39.2
FvH4_1g03880 Fragaria vesca HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.0
FAN19G2956 Fragaria x ananassa HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.0
FAN23G1612 Fragaria x ananassa HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.0
FAN26G2108 Fragaria x ananassa HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.0
FAN28G2714 Fragaria x ananassa HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.0
Pp3c9_1560 Physcomitrium patens HOM05D000639 ORTHO05D005966 8.6e-18 95.1 140 36.4
PGR102G0199 Punica granatum HOM05D000639 ORTHO05D005966 8.6e-18 95.1 132 39.4
Sed0022714 Sechium edule HOM05D000639 ORTHO05D005966 8.6e-18 95.1 142 38.0
Thecc.09G121100 Theobroma cacao HOM05D000639 ORTHO05D005966 8.6e-18 95.1 130 40.8
COL.COLO4_35182 Corchorus olitorius HOM05D000639 ORTHO05D005966 1.1e-17 94.7 130 39.2
Dinv36566 Davidia involucrata HOM05D000639 ORTHO05D005966 1.1e-17 94.7 130 40.0
Lj1g0006107 Lotus japonicus HOM05D000639 ORTHO05D005966 1.1e-17 94.7 142 38.0
Sed0023961 Sechium edule HOM05D000639 ORTHO05D005966 1.1e-17 94.7 130 40.0
Sc18g0000810 Simmondsia chinensis HOM05D000639 ORTHO05D005966 1.1e-17 94.7 148 38.5
Pp3c15_2560 Physcomitrium patens HOM05D000639 ORTHO05D005966 1.5e-17 94.4 128 38.3
ClCG06G010830 Citrullus lanatus HOM05D000639 ORTHO05D005966 1.9e-17 94.0 142 38.0
CsaV3_1G029740 Cucumis sativus L. HOM05D000639 ORTHO05D005966 1.9e-17 94.0 130 39.2
Gohir.A05G019000 Gossypium hirsutum HOM05D000639 ORTHO05D005966 1.9e-17 94.0 130 39.2
Gohir.D05G020100 Gossypium hirsutum HOM05D000639 ORTHO05D005966 1.9e-17 94.0 130 39.2
Gorai.009G020400 Gossypium raimondii HOM05D000639 ORTHO05D005966 1.9e-17 94.0 130 39.2
HanXRQChr12g0356471 Helianthus annuus HOM05D000639 ORTHO05D005966 1.9e-17 94.0 130 39.2
Rhsim03G0246100 Rhododendron simsii HOM05D000639 ORTHO05D005966 1.9e-17 94.0 128 41.4
Actinidia22012 Actinidia chinensis HOM05D000639 ORTHO05D005966 2.5e-17 93.6 128 39.8
Duzib187G1143 Durio zibethinus HOM05D000639 ORTHO05D005966 2.5e-17 93.6 130 40.0
Aa31LG5G9060 Aethionema arabicum HOM05D000639 ORTHO05D005966 3.3e-17 93.2 130 37.7
Nn2g11937 Nelumbo nucifera HOM05D000639 ORTHO05D005966 3.3e-17 93.2 128 39.1
Nitab4.5_0004237g0010 Nicotiana tabacum HOM05D000639 ORTHO05D005966 3.3e-17 93.2 128 39.1
Ah.14g080820 Amaranthus hybridus HOM05D000639 ORTHO05D005966 5.6e-17 92.4 128 39.1
Glyma.04G149600 Glycine max HOM05D000639 ORTHO05D005966 5.6e-17 92.4 142 36.6
HanXRQChr10g0316771 Helianthus annuus HOM05D000639 ORTHO05D005966 5.6e-17 92.4 130 39.2
Peaxi162Scf00361g00045 Petunia axillaris HOM05D000639 ORTHO05D005966 5.6e-17 92.4 128 37.5
Aqoxy7G02066 Aquilegia oxysepala HOM05D000639 ORTHO05D005966 7.3e-17 92.0 128 39.1
MSTRG.10684 Avicennia marina HOM05D000639 ORTHO05D005966 7.3e-17 92.0 147 35.4
Dinv41542 Davidia involucrata HOM05D000639 ORTHO05D005966 7.3e-17 92.0 134 38.8
CANSAT56G2031 Cannabis sativa HOM05D000639 ORTHO05D005966 9.5e-17 91.7 130 39.2
Lsat_1_v5_gn_5_97961 Lactuca sativa HOM05D000639 ORTHO05D005966 9.5e-17 91.7 130 38.5
SEGI_06396 Sequoiadendron giganteum HOM05D000639 ORTHO05D005966 9.5e-17 91.7 128 39.8
AL1G14590 Arabidopsis lyrata HOM05D000639 ORTHO05D005966 1.2e-16 91.3 130 35.4
AT1G04870 Arabidopsis thaliana HOM05D000639 ORTHO05D005966 1.2e-16 91.3 130 35.4
Carub.0001s0411 Capsella rubella HOM05D000639 ORTHO05D005966 1.2e-16 91.3 130 35.4
Sabra18G0062100 Salix brachista HOM05D000639 ORTHO05D005966 1.2e-16 91.3 130 39.2
Hma1.2p1_0665F.1_g199270 Hydrangea macrophylla HOM05D000639 ORTHO05D005966 1.6e-16 90.9 142 38.7
ECA234G3201 Erigeron canadensis HOM05D000639 ORTHO05D005966 2.1e-16 90.5 130 38.5
C09p44710 Brassica napus HOM05D000639 ORTHO05D005966 2.8e-16 90.1 130 36.2
CARHR004260 Cardamine hirsuta HOM05D000639 ORTHO05D005966 2.8e-16 90.1 130 35.4
CBR_g9102 Chara braunii HOM05D000639 ORTHO05D005966 2.8e-16 90.1 128 38.3
Thhalv10013798m.g Eutrema salsugineum HOM05D000639 ORTHO05D005966 2.8e-16 90.1 130 34.6
arahy.Tifrunner.gnm1.ann1.94NDDX Arachis hypogaea HOM05D000639 ORTHO05D005966 3.6e-16 89.7 136 39.0
Cpa.g.sc75.68 Carica papaya HOM05D000639 ORTHO05D005966 3.6e-16 89.7 130 38.5
CiPaw.04G169600 Carya illinoinensis HOM05D000639 ORTHO05D005966 3.6e-16 89.7 142 36.6
Cc06_g08920 Coffea canephora HOM05D000639 ORTHO05D005966 3.6e-16 89.7 128 39.1
TAR625G1221 Trochodendron aralioides HOM05D000639 ORTHO05D005966 3.6e-16 89.7 132 37.9
arahy.Tifrunner.gnm1.ann1.VA2Y9G Arachis hypogaea HOM05D000639 ORTHO05D005966 4.7e-16 89.4 136 38.2
Lsat_1_v5_gn_8_57261 Lactuca sativa HOM05D000639 ORTHO05D005966 4.7e-16 89.4 130 36.2
Manes.14G129300 Manihot esculenta HOM05D000639 ORTHO05D005966 4.7e-16 89.4 140 35.0
Migut.K00470 Erythranthe guttata HOM05D000639 ORTHO05D005966 6.2e-16 89.0 128 36.7
AUR62011074 Chenopodium quinoa HOM05D000639 ORTHO05D005966 8.1e-16 88.6 74 52.7
CDE06G2279 Ceratophyllum demersum HOM05D000639 ORTHO05D005966 1.1e-15 88.2 128 38.3
MBI01_g11880_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D005966 1.1e-15 88.2 130 38.5
BcaB05g22130 Brassica carinata HOM05D000639 ORTHO05D005966 1.4e-15 87.8 130 36.2
A02p10350 Brassica napus HOM05D000639 ORTHO05D005966 1.8e-15 87.4 130 36.2
Oeu034106.1 Olea europaea HOM05D000639 ORTHO05D005966 1.8e-15 87.4 130 36.9
Sp6g16390 Schrenkiella parvula HOM05D000639 ORTHO05D005966 1.8e-15 87.4 130 35.4
TWI34G1898 Tripterygium wilfordii HOM05D000639 ORTHO05D005966 1.8e-15 87.4 128 38.3
PSO170G4892 Papaver somniferum HOM05D000639 ORTHO05D005966 3.1e-15 86.7 128 37.5
PSO455G0187 Papaver somniferum HOM05D000639 ORTHO05D005966 3.1e-15 86.7 128 37.5
TWI32G0239 Tripterygium wilfordii HOM05D000639 ORTHO05D005966 3.1e-15 86.7 128 39.1
BcaC03g14321 Brassica carinata HOM05D000639 ORTHO05D005966 4.0e-15 86.3 130 35.4
C02p17080 Brassica napus HOM05D000639 ORTHO05D005966 4.0e-15 86.3 130 35.4
BolC2t07806H Brassica oleracea HOM05D000639 ORTHO05D005966 4.0e-15 86.3 130 35.4
Nitab4.5_0000010g0090 Nicotiana tabacum HOM05D000639 ORTHO05D005966 4.0e-15 86.3 72 51.4
BraA02t06101Z Brassica rapa HOM05D000639 ORTHO05D005966 6.8e-15 85.5 130 36.2
Hma1.2p1_0018F.1_g012780 Hydrangea macrophylla HOM05D000639 ORTHO05D005966 6.8e-15 85.5 72 51.4
unitig_85.g27252 Utricularia gibba HOM05D001787 ORTHO05D003488 6.8e-15 85.5 72 50.0
HPP92_019957 Vanilla planifolia HOM05D000639 ORTHO05D005966 3.4e-14 83.2 147 31.3
THA.LOC104809006 Tarenaya hassleriana HOM05D000639 ORTHO05D005966 4.4e-14 82.8 130 35.4
Zm00001eb270370 Zea mays HOM05D000639 ORTHO05D005966 5.8e-14 82.4 128 34.4
Os06g0142800 Oryza sativa ssp. japonica HOM05D000639 ORTHO05D005966 1.1e-12 78.2 128 32.8
Ca_12333_v3 Cicer arietinum L. HOM05D000639 ORTHO05D005966 1.4e-12 77.8 115 38.3
HPP92_019968 Vanilla planifolia HOM05D000639 ORTHO05D005966 1.9e-12 77.4 74 41.9
vmacro06183 Vaccinium macrocarpon HOM05D000639 ORTHO05D005966 2.7e-11 73.6 146 34.9
BraA09t39761Z Brassica rapa HOM05D000639 ORTHO05D005966 2.1e-08 63.9 58 43.1
MCO01G705 Micromonas commoda HOM05D000639 ORTHO05D005966 4.7e-08 62.8 78 38.5
Cre12.g558100 Chlamydomonas reinhardtii HOM05D000639 ORTHO05D005966 1.4e-07 61.2 131 26.7
BcaB08g35791 Brassica carinata HOM05D000639 ORTHO05D005966 2.4e-07 60.5 97 40.2
TAR636G1882 Trochodendron aralioides HOM05D000639 ORTHO05D005966 2.4e-07 60.5 35 77.1
Oeu058053.1 Olea europaea HOM05D000639 ORTHO05D005966 3.4e-06 56.6 87 39.1


User provided reference genes

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