Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 5.1e-105 384.4 194 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 3.5e-61 238.8 160 71.9
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 2.2e-60 236.1 168 68.5
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.5e-59 232.6 150 72.0
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.2e-59 232.3 150 72.0
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 9.4e-59 230.7 152 71.7
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.6e-58 229.9 142 72.5
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.6e-58 229.9 176 64.2
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 2.7e-58 229.2 158 70.3
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.7e-58 229.2 155 69.0
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 2.7e-58 229.2 172 66.9
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 4.7e-58 228.4 158 67.7
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 4.7e-58 228.4 158 67.7
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.7e-58 228.4 177 64.4
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 6.1e-58 228.0 155 69.0
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 6.1e-58 228.0 155 67.7
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 6.1e-58 228.0 168 66.7
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 8.0e-58 227.6 159 69.2
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 8.0e-58 227.6 153 69.9
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.0e-57 227.3 157 68.8
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.0e-57 227.3 162 66.7
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.0e-57 227.3 161 66.5
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.0e-57 227.3 182 63.7
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.4e-57 226.9 152 69.1
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.4e-57 226.9 164 66.5
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 1.8e-57 226.5 162 68.5
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.8e-57 226.5 177 62.1
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.8e-57 226.5 155 67.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.3e-57 226.1 180 61.1
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.0e-57 225.7 153 69.3
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 4.0e-57 225.3 148 70.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 4.0e-57 225.3 153 69.3
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 5.2e-57 224.9 160 64.4
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.2e-57 224.9 187 62.0
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 6.8e-57 224.6 160 66.9
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 8.8e-57 224.2 148 69.6
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 8.8e-57 224.2 142 71.8
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.2e-56 223.8 154 66.2
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.2e-56 223.8 176 64.2
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.2e-56 223.8 147 71.4
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.5e-56 223.4 159 66.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.5e-56 223.4 152 68.4
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 2.0e-56 223.0 155 67.7
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 2.0e-56 223.0 161 67.1
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.6e-56 222.6 175 62.3
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.6e-56 222.6 146 69.9
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 2.6e-56 222.6 190 61.6
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 3.4e-56 222.2 155 65.8
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 5.7e-56 221.5 161 67.1
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 7.5e-56 221.1 154 68.2
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 7.5e-56 221.1 153 67.3
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 9.8e-56 220.7 152 69.1
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 9.8e-56 220.7 142 71.8
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.3e-55 220.3 181 61.3
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.3e-55 220.3 181 61.3
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.3e-55 220.3 136 75.0
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.7e-55 219.9 139 74.1
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.7e-55 219.9 159 66.0
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.7e-55 219.9 170 64.1
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.2e-55 219.5 156 67.9
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 2.8e-55 219.2 164 64.0
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 2.8e-55 219.2 164 64.0
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.8e-55 219.2 156 66.7
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 3.7e-55 218.8 154 68.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 4.9e-55 218.4 185 58.9
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 8.3e-55 217.6 177 62.1
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 8.3e-55 217.6 140 70.7
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 8.3e-55 217.6 184 56.5
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.1e-54 217.2 136 72.1
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.8e-54 216.5 134 74.6
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.8e-54 216.5 143 71.3
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.8e-54 216.5 161 64.6
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.4e-54 216.1 162 65.4
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 3.1e-54 215.7 140 70.7
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.1e-54 215.7 142 70.4
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.1e-54 215.7 142 70.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.1e-54 215.7 161 64.0
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.1e-54 215.7 170 62.9
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 3.1e-54 215.7 165 63.0
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 5.4e-54 214.9 161 64.6
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 4.5e-53 211.8 174 62.1
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 5.9e-53 211.5 136 72.1
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.3e-52 210.3 166 62.7
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.3e-52 209.5 164 63.4
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.8e-52 208.8 143 69.2
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 5.0e-52 208.4 190 58.4
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 8.6e-52 207.6 126 74.6
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 8.6e-52 207.6 170 61.2
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.5e-51 206.8 128 74.2
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.5e-51 206.8 158 62.7
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.5e-51 206.8 149 66.4
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.6e-50 203.4 150 65.3
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.8e-49 199.9 147 66.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.5e-48 196.8 136 68.4
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 3.4e-48 195.7 141 65.2
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.1e-46 190.7 130 70.0
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 8.0e-42 174.5 149 53.7
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 5.8e-40 168.3 132 65.9
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.9e-35 153.3 97 67.0
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 2.8e-34 149.4 90 71.1
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 3.4e-32 142.5 147 53.7
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 4.4e-32 142.1 147 52.4
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 3.0e-28 129.4 134 49.3
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.9e-28 129.0 74 74.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.6e-27 125.2 90 64.4
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 5.6e-27 125.2 110 60.9
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 9.5e-27 124.4 90 67.8
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.2e-26 124.0 91 64.8
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 4.0e-25 119.0 97 59.8
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.3e-23 114.0 83 67.5
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 9.2e-22 107.8 77 68.8
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.3e-20 103.2 67 67.2
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.8e-18 96.3 56 75.0


User provided reference genes

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