Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 3.1e-223 778.1 384 100.0
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 7.2e-119 431.4 327 62.4
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 5.2e-117 425.2 361 57.3
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.0e-116 423.3 318 63.2
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 2.2e-115 419.9 362 56.6
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 2.8e-115 419.5 319 62.4
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.4e-114 416.4 318 61.9
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 3.1e-114 416.0 385 55.1
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 5.4e-114 415.2 318 61.3
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 5.4e-114 415.2 356 57.0
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 7.0e-114 414.8 322 59.6
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 7.0e-114 414.8 330 60.3
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 2.0e-113 413.3 369 54.5
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 2.7e-113 412.9 361 56.5
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 3.5e-113 412.5 318 60.7
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 4.5e-113 412.1 318 60.4
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 5.9e-113 411.8 318 61.3
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 5.9e-113 411.8 386 53.4
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 1.0e-112 411.0 319 60.8
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 1.7e-112 410.2 387 52.2
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 2.9e-112 409.5 360 56.7
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 2.9e-112 409.5 391 53.2
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 3.8e-112 409.1 325 59.7
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 5.0e-112 408.7 325 59.4
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 5.0e-112 408.7 330 57.6
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 6.5e-112 408.3 334 57.8
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 6.5e-112 408.3 326 60.1
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 6.5e-112 408.3 354 56.5
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 8.5e-112 407.9 372 54.8
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 8.5e-112 407.9 343 57.4
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 8.5e-112 407.9 343 57.7
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 1.1e-111 407.5 318 61.0
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.5e-111 407.1 318 60.4
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 1.9e-111 406.8 318 61.0
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 1.9e-111 406.8 382 55.2
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 4.2e-111 405.6 325 58.5
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 4.2e-111 405.6 334 57.5
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 4.2e-111 405.6 338 59.2
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 5.5e-111 405.2 343 57.4
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 7.2e-111 404.8 320 59.1
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 7.2e-111 404.8 390 53.8
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 9.5e-111 404.4 321 59.2
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 9.5e-111 404.4 318 60.4
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 1.6e-110 403.7 324 60.2
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.6e-110 403.7 379 52.8
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 1.6e-110 403.7 317 58.4
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 2.1e-110 403.3 324 59.9
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 2.1e-110 403.3 318 59.7
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 2.1e-110 403.3 318 58.8
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 2.7e-110 402.9 364 55.2
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 3.6e-110 402.5 330 57.6
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 6.1e-110 401.7 318 58.5
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 6.1e-110 401.7 345 57.1
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 8.0e-110 401.4 352 56.0
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.4e-109 400.6 326 58.6
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 1.4e-109 400.6 326 58.9
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.4e-109 400.6 327 57.8
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 1.8e-109 400.2 368 54.6
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 4.0e-109 399.1 375 52.8
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 5.2e-109 398.7 316 60.8
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 8.8e-109 397.9 358 53.6
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 8.8e-109 397.9 327 57.5
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 1.2e-108 397.5 327 57.5
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 1.2e-108 397.5 390 51.8
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 1.5e-108 397.1 386 52.6
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 1.5e-108 397.1 389 51.7
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 2.6e-108 396.4 325 59.1
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 2.6e-108 396.4 332 57.5
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 4.4e-108 395.6 327 56.9
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 4.4e-108 395.6 322 57.1
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 4.4e-108 395.6 318 58.5
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 5.7e-108 395.2 368 53.8
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 1.3e-107 394.0 362 54.7
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.7e-107 392.5 327 56.9
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 3.7e-107 392.5 384 54.2
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 3.7e-107 392.5 364 54.7
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 6.3e-107 391.7 387 51.4
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 8.3e-107 391.3 327 56.6
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 2.4e-106 389.8 324 56.8
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 4.1e-106 389.0 353 52.7
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 5.4e-106 388.7 315 57.8
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 5.4e-106 388.7 314 58.6
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 2.7e-105 386.3 314 57.6
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 5.9e-105 385.2 339 56.9
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.3e-104 384.0 314 58.0
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.9e-103 380.2 381 50.4
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 1.1e-95 354.4 276 59.1
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 8.0e-94 348.2 367 49.3
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 1.0e-93 347.8 280 59.3
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.2e-92 344.4 268 61.2
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 4.9e-91 339.0 278 57.2
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 3.2e-90 336.3 261 62.8
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 5.4e-90 335.5 400 47.0
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 9.2e-90 334.7 268 59.3
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 1.5e-87 327.4 267 57.3
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 3.1e-77 293.1 312 50.0
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 6.8e-77 292.0 270 55.2
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 6.4e-75 285.4 309 48.2
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-72 278.1 267 52.8
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 1.6e-70 270.8 322 43.5
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 1.6e-70 270.8 322 43.5
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 6.9e-69 265.4 336 44.0
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 1.5e-68 264.2 230 53.9
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 9.9e-68 261.5 290 47.2
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.2e-67 260.4 232 53.9
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 1.5e-63 247.7 263 46.4
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.2e-58 229.9 154 69.5
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.1e-57 227.3 265 48.7
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 6.0e-49 199.1 130 72.3
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 5.1e-48 196.1 271 40.6
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 1.5e-44 184.5 237 44.7
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 7.6e-44 182.2 166 53.0
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 1.3e-43 181.4 182 47.3
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 7.9e-33 145.6 406 30.3
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 4.8e-30 136.3 105 61.0
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 2.6e-23 114.0 91 61.5
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 3.3e-23 113.6 79 65.8
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 4.4e-23 113.2 78 67.9
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 4.7e-17 93.2 88 50.0
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 1.8e-16 91.3 91 50.5
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.1e-10 72.0 74 45.9
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.1e-10 72.0 74 45.9
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 4.2e-10 70.1 46 71.7
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 1.6e-09 68.2 250 30.4
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 4.7e-09 66.6 271 26.9
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 4.7e-09 66.6 47 70.2
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 6.1e-09 66.2 95 46.3
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 8.0e-09 65.9 309 24.9
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 1.8e-08 64.7 105 35.2
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 2.3e-08 64.3 327 24.5
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 2.3e-08 64.3 307 24.1
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 3.0e-08 63.9 275 25.5
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 4.0e-08 63.5 306 24.5
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.2e-08 63.2 327 24.5
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 5.2e-08 63.2 303 26.1
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 5.2e-08 63.2 69 47.8
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 5.2e-08 63.2 53 52.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 6.7e-08 62.8 327 24.5
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 6.7e-08 62.8 282 24.8
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 8.8e-08 62.4 327 24.5
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 8.8e-08 62.4 276 26.1
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 1.2e-07 62.0 255 26.3
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 2.0e-07 61.2 306 26.5
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 2.0e-07 61.2 297 25.3
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.0e-07 61.2 319 24.5
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 4.4e-07 60.1 295 24.7
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.7e-07 59.7 317 24.9
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 9.7e-07 58.9 343 25.4
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 9.7e-07 58.9 272 24.3
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 9.7e-07 58.9 331 24.2
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 9.7e-07 58.9 46 56.5
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 1.3e-06 58.5 272 24.6
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 1.3e-06 58.5 52 57.7
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 3.7e-06 57.0 111 32.4
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.8e-06 56.6 75 41.3
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 4.8e-06 56.6 322 24.8
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 6.3e-06 56.2 279 24.4
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 6.3e-06 56.2 275 23.6


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