Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 0.0e+00 2338.9 1184 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 1.3e-203 714.5 1569 33.5
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 8.0e-193 678.7 1417 32.5
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 1.2e-188 664.8 1422 33.1
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 2.0e-188 664.1 1515 31.4
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 2.9e-187 660.2 1508 31.8
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 8.6e-187 658.7 1532 32.0
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 9.5e-186 655.2 1511 31.9
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 3.6e-185 653.3 1525 31.3
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 6.1e-185 652.5 1563 31.9
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 6.1e-185 652.5 1498 31.7
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 1.2e-183 648.3 1540 32.1
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 1.5e-183 647.9 1516 31.3
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 2.0e-183 647.5 1515 31.9
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 2.0e-183 647.5 1516 31.1
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 9.8e-183 645.2 1471 31.5
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 2.2e-182 644.0 1467 32.2
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 2.9e-182 643.7 1520 32.2
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 2.9e-182 643.7 1510 31.2
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 3.7e-182 643.3 1517 30.9
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 4.9e-182 642.9 1514 31.2
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 6.4e-182 642.5 1488 32.1
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 8.3e-182 642.1 1464 32.1
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 8.3e-182 642.1 1519 30.8
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 3.2e-181 640.2 1468 31.6
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 4.1e-181 639.8 1479 31.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 4.1e-181 639.8 1513 31.0
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 2.7e-180 637.1 1504 31.0
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 3.5e-180 636.7 1449 31.5
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 6.0e-180 636.0 1514 31.2
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 6.0e-180 636.0 1547 31.1
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 1.3e-179 634.8 1445 31.6
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 1.3e-179 634.8 1500 31.1
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 1.3e-179 634.8 1475 31.4
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 1.3e-179 634.8 1479 31.6
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 2.3e-179 634.0 1534 30.9
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 3.0e-179 633.6 1557 30.7
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 6.6e-179 632.5 1459 31.4
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.5e-178 631.3 1480 31.1
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 1.5e-178 631.3 1452 31.1
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 1.5e-178 631.3 1452 31.1
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 9.5e-178 628.6 1509 30.4
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 9.5e-178 628.6 1478 31.9
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 3.6e-177 626.7 1475 31.5
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 3.6e-177 626.7 1479 31.1
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 6.2e-177 625.9 1460 31.4
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 8.0e-177 625.5 1468 31.1
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 8.0e-177 625.5 1521 30.9
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 5.2e-176 622.9 1506 31.0
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 1.5e-175 621.3 1476 31.5
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 3.4e-175 620.2 1471 30.9
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 4.4e-175 619.8 1472 32.0
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 4.4e-175 619.8 1521 30.6
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 9.8e-175 618.6 1517 31.2
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 1.1e-173 615.1 1528 30.4
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.0e-172 610.9 1600 29.7
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 2.0e-172 610.9 1548 30.7
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 2.7e-172 610.5 1543 29.6
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 3.5e-172 610.1 1469 30.5
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 3.5e-172 610.1 1473 30.5
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 4.6e-172 609.8 1438 31.3
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 4.6e-172 609.8 1488 30.6
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 4.6e-172 609.8 1495 31.8
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 1.0e-171 608.6 1396 31.6
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 5.0e-171 606.3 1507 30.7
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 5.0e-171 606.3 1513 29.9
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 2.5e-170 604.0 1482 30.8
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 9.5e-170 602.1 1431 31.2
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 1.2e-169 601.7 1459 30.6
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 2.8e-169 600.5 1451 31.6
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 1.8e-168 597.8 1475 31.0
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 2.0e-167 594.3 1535 30.0
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 5.8e-167 592.8 1521 30.1
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 8.3e-166 589.0 1487 30.4
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 1.2e-164 585.1 1472 30.5
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 3.5e-164 583.6 1494 30.8
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 2.8e-161 573.9 1476 31.0
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 4.7e-161 573.2 1594 29.3
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 6.2e-161 572.8 1487 30.3
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 8.1e-161 572.4 1562 29.1
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 1.1e-160 572.0 1489 29.4
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 1.2e-159 568.5 1478 30.4
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 5.8e-159 566.2 1506 29.9
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 1.3e-158 565.1 1476 30.7
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 2.2e-158 564.3 1338 32.0
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 8.4e-158 562.4 1450 30.2
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 3.0e-155 553.9 1490 28.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 4.7e-153 546.6 1416 30.2
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 2.4e-149 534.3 1505 28.6
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 2.3e-147 527.7 1017 34.1
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 2.5e-146 524.2 1009 34.2
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 5.6e-146 523.1 1054 34.8
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 9.9e-143 512.3 1400 29.5
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 1.3e-142 511.9 1394 28.7
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 1.5e-138 498.4 1346 28.8
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.5e-138 498.4 1053 34.0
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 5.8e-127 459.9 999 34.0
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 3.5e-87 327.8 979 27.5
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 5.9e-79 300.4 793 29.6
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.1e-72 279.6 1023 25.8
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 5.4e-72 277.3 423 40.0
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.9e-70 271.6 488 37.1
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 8.0e-68 263.5 518 33.4
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 3.5e-47 194.9 380 35.3
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 6.2e-28 131.0 377 25.2
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.2e-18 100.1 177 28.8
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 3.2e-16 92.0 107 41.1
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.5e-13 82.4 90 52.2
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.5e-13 82.4 90 52.2
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 9.6e-13 80.5 90 40.0
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 4.0e-11 75.1 174 33.3
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 5.1e-06 58.2 66 40.9


User provided reference genes

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