Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.5e-81 306.2 161 100.0
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 1.6e-32 143.3 94 74.5
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.8e-31 139.8 99 71.7
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.8e-31 139.8 99 71.7
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 3.1e-31 139.0 96 72.9
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 9.0e-31 137.5 101 69.3
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 2.0e-30 136.3 128 59.4
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 3.4e-30 135.6 119 61.3
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 5.9e-30 134.8 146 54.8
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 5.9e-30 134.8 101 68.3
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 5.9e-30 134.8 122 62.3
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 5.9e-30 134.8 96 70.8
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 7.6e-30 134.4 96 71.9
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.7e-29 133.3 92 75.0
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 1.7e-29 133.3 150 54.7
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 2.9e-29 132.5 96 71.9
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 3.8e-29 132.1 99 67.7
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 5.0e-29 131.7 96 68.8
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 5.0e-29 131.7 97 72.2
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 5.0e-29 131.7 98 68.4
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 5.0e-29 131.7 138 55.1
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 5.0e-29 131.7 96 68.8
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 5.0e-29 131.7 98 66.3
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 5.0e-29 131.7 96 70.8
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 5.0e-29 131.7 96 71.9
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 6.5e-29 131.3 99 67.7
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 8.5e-29 131.0 140 56.4
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 8.5e-29 131.0 99 68.7
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.1e-28 130.6 130 54.6
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.1e-28 130.6 138 54.3
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 1.1e-28 130.6 96 70.8
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 1.1e-28 130.6 99 68.7
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.4e-28 130.2 96 67.7
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.4e-28 130.2 96 67.7
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 1.4e-28 130.2 101 66.3
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 1.9e-28 129.8 138 54.3
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 3.2e-28 129.0 99 70.7
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 3.2e-28 129.0 99 70.7
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 3.2e-28 129.0 96 66.7
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 3.2e-28 129.0 99 67.7
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 5.5e-28 128.3 108 62.0
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 7.2e-28 127.9 96 67.7
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.2e-27 127.1 95 69.5
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 1.2e-27 127.1 114 61.4
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.6e-27 126.7 107 65.4
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.6e-27 126.7 102 63.7
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 1.6e-27 126.7 114 59.6
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 1.6e-27 126.7 87 74.7
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.1e-27 126.3 100 67.0
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 2.7e-27 125.9 92 69.6
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 3.6e-27 125.6 96 69.8
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 3.6e-27 125.6 111 63.1
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 4.6e-27 125.2 96 67.7
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 4.6e-27 125.2 95 66.3
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 6.1e-27 124.8 97 68.0
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 7.9e-27 124.4 95 64.2
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 7.9e-27 124.4 83 73.5
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 7.9e-27 124.4 97 68.0
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 7.9e-27 124.4 106 64.2
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 1.0e-26 124.0 89 68.5
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 1.0e-26 124.0 96 66.7
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.8e-26 123.2 87 70.1
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.8e-26 123.2 114 57.9
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.8e-26 123.2 114 57.9
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.8e-26 123.2 114 57.9
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.8e-26 123.2 95 64.2
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.3e-26 122.9 102 61.8
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 2.3e-26 122.9 91 70.3
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 2.3e-26 122.9 106 63.2
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 3.0e-26 122.5 95 64.2
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.0e-26 122.5 98 67.3
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 3.0e-26 122.5 95 66.3
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 5.1e-26 121.7 95 64.2
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 5.1e-26 121.7 95 64.2
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 5.1e-26 121.7 95 64.2
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 5.1e-26 121.7 95 64.2
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 63.2
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 63.2
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 63.2
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 64.2
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 63.2
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 8.8e-26 120.9 90 65.6
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 8.8e-26 120.9 95 63.2
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.1e-25 120.6 131 52.7
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.1e-25 120.6 131 52.7
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.1e-25 120.6 99 62.6
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.5e-25 120.2 96 63.5
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.9e-25 119.8 87 67.8
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 2.5e-25 119.4 163 48.5
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 3.3e-25 119.0 137 54.7
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 3.3e-25 119.0 121 57.0
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 4.3e-25 118.6 94 61.7
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 4.3e-25 118.6 95 62.1
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 4.3e-25 118.6 161 47.2
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 7.4e-25 117.9 90 66.7
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.2e-24 116.3 76 75.0
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 2.2e-24 116.3 73 74.0
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 8.2e-24 114.4 96 61.5
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 3.1e-23 112.5 101 60.4
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 3.1e-23 112.5 98 61.2
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 5.3e-23 111.7 73 72.6
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 5.3e-23 111.7 107 59.8
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 3.4e-22 109.0 78 70.5
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 2.9e-21 105.9 151 45.7
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.9e-20 103.2 78 64.1
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 5.5e-20 101.7 103 51.5
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.0e-18 97.4 111 50.5
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 1.5e-17 93.6 98 53.1
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.4e-17 91.3 98 43.9
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 3.7e-16 89.0 96 53.1
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 2.9e-13 79.3 88 48.9
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 3.8e-13 79.0 49 79.6
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.4e-12 77.0 47 78.7
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 4.7e-11 72.0 46 71.7
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 4.7e-11 72.0 46 71.7
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 9.1e-07 57.8 49 59.2


User provided reference genes

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