Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 0.0e+00 1675.6 874 100.0
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 5.9e-100 369.8 191 99.5
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 2.3e-27 128.6 130 51.5
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 3.8e-22 111.3 189 37.6
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 3.8e-22 111.3 123 42.3
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 8.4e-22 110.2 131 43.5
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 1.1e-21 109.8 129 42.6
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 4.2e-21 107.8 149 38.9
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 5.4e-21 107.5 125 40.0
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 5.4e-21 107.5 133 40.6
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 7.1e-21 107.1 112 49.1
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 7.1e-21 107.1 124 42.7
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 7.1e-21 107.1 130 39.2
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 9.3e-21 106.7 124 41.1
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 9.3e-21 106.7 177 36.2
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 9.3e-21 106.7 117 46.2
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 9.3e-21 106.7 117 46.2
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.2e-20 106.3 117 46.2
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.2e-20 106.3 117 45.3
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 1.2e-20 106.3 143 37.8
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.2e-20 106.3 131 44.3
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 2.1e-20 105.5 117 45.3
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 2.1e-20 105.5 117 42.7
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 2.7e-20 105.1 130 40.8
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 3.5e-20 104.8 146 39.0
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 4.6e-20 104.4 141 39.7
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 6.0e-20 104.0 142 42.3
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 6.0e-20 104.0 172 36.0
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 6.0e-20 104.0 146 39.0
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 6.0e-20 104.0 125 41.6
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 6.0e-20 104.0 155 38.7
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 6.0e-20 104.0 117 45.3
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 1.0e-19 103.2 128 39.8
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.0e-19 103.2 163 36.2
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 1.0e-19 103.2 166 38.0
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 1.3e-19 102.8 117 42.7
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.7e-19 102.4 134 42.5
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.7e-19 102.4 117 47.9
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.3e-19 102.1 117 43.6
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 2.3e-19 102.1 116 41.4
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 3.0e-19 101.7 117 44.4
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 3.9e-19 101.3 118 45.8
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 3.9e-19 101.3 146 37.0
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 3.9e-19 101.3 166 38.0
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 5.1e-19 100.9 159 34.6
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 5.1e-19 100.9 118 41.5
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 5.1e-19 100.9 128 39.8
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 5.1e-19 100.9 125 38.4
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 6.6e-19 100.5 130 36.9
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 8.7e-19 100.1 169 35.5
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 1.1e-18 99.8 123 39.8
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 1.1e-18 99.8 124 38.7
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 1.5e-18 99.4 123 39.8
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.5e-18 99.4 183 36.1
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 1.9e-18 99.0 121 37.2
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 1.9e-18 99.0 117 45.3
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.5e-18 98.6 153 35.9
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 2.5e-18 98.6 134 41.0
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 5.6e-18 97.4 117 42.7
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 7.3e-18 97.1 143 38.5
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 7.3e-18 97.1 122 40.2
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 9.6e-18 96.7 124 40.3
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 9.6e-18 96.7 163 35.0
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 9.6e-18 96.7 130 37.7
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 1.3e-17 96.3 118 43.2
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.6e-17 95.9 124 39.5
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 2.1e-17 95.5 130 36.9
SMO367G1269 Selaginella moellendorffii HOM05D056781 ORTHO05D038368 2.1e-17 95.5 582 23.4
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 2.8e-17 95.1 103 50.5
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.6e-17 94.7 92 50.0
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 3.6e-17 94.7 118 37.3
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 3.6e-17 94.7 134 36.6
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 4.8e-17 94.4 123 37.4
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 8.1e-17 93.6 118 40.7
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 1.4e-16 92.8 118 44.1
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 1.4e-16 92.8 130 38.5
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.8e-16 92.4 132 39.4
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 4.0e-16 91.3 117 40.2
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 5.3e-16 90.9 140 35.7
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 5.3e-16 90.9 116 39.7
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 5.3e-16 90.9 117 41.0
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 6.9e-16 90.5 117 42.7
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 9.0e-16 90.1 117 41.0
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.2e-15 89.7 137 35.0
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.5e-15 89.4 140 37.9
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 2.6e-15 88.6 117 38.5
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 4.5e-15 87.8 117 39.3
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 4.5e-15 87.8 117 38.5
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 7.6e-15 87.0 106 37.7
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.3e-14 86.3 186 33.9
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.7e-14 85.9 132 34.8
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 2.2e-14 85.5 96 44.8
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 3.8e-14 84.7 95 41.1
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 1.4e-13 82.8 116 37.9
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 3.2e-13 81.6 116 37.1
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 3.2e-13 81.6 116 37.1
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 5.4e-13 80.9 116 36.2
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 5.4e-13 80.9 116 36.2
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 5.4e-13 80.9 116 36.2
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 5.4e-13 80.9 116 36.2
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 7.1e-13 80.5 104 39.4
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 7.1e-13 80.5 95 40.0
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 9.3e-13 80.1 105 40.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.2e-12 79.7 83 45.8
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 6.0e-12 77.4 98 40.8
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-10 71.6 140 32.1
SMO364G0658 Selaginella moellendorffii HOM05D030171 ORTHO05D031204 3.3e-10 71.6 215 27.9
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 4.3e-10 71.2 102 38.2
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 1.3e-09 69.7 103 38.8
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-09 68.9 88 42.0
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.1e-09 68.9 155 31.0
AagrBONN_evm.TU.Sc2ySwM_368.925 Anthoceros agrestis HOM05D030171 ORTHO05D031204 1.1e-08 66.6 214 25.7
SMO112G0120 Selaginella moellendorffii HOM05D030171 ORTHO05D031204 2.0e-07 62.4 150 34.7
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 4.5e-07 61.2 68 44.1
AagrBONN_evm.TU.Sc2ySwM_368.942 Anthoceros agrestis HOM05D030171 ORTHO05D005138 1.0e-06 60.1 179 30.2
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.7e-06 59.3 90 38.9


User provided reference genes

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