Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0359 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 5.1e-72 274.2 133 100.0
Os03g0331600 Oryza sativa ssp. japonica HOM05D005836 ORTHO05D007335 3.4e-52 208.4 132 72.0
Dinv28763 Davidia involucrata HOM05D005836 ORTHO05D007335 7.7e-52 207.2 130 72.3
MSTRG.17936 Avicennia marina HOM05D005836 ORTHO05D007335 6.5e-51 204.1 132 70.5
SalBow2G1106 Salvia bowleyana HOM05D005836 ORTHO05D007335 6.5e-51 204.1 132 71.2
SGA_v2.0_scaffold77G25345 Striga asiatica HOM05D005836 ORTHO05D007335 1.1e-50 203.4 130 71.5
Zm00001eb015790 Zea mays HOM05D005836 ORTHO05D007335 3.2e-50 201.8 132 68.9
Cc01_g15580 Coffea canephora HOM05D005836 ORTHO05D007335 4.2e-50 201.4 131 71.0
PGR119G1588 Punica granatum HOM05D005836 ORTHO05D007335 1.2e-49 199.9 130 71.5
Thecc.09G366400 Theobroma cacao HOM05D005836 ORTHO05D007335 2.1e-49 199.1 130 70.8
QL01p023477 Quercus lobata HOM05D005836 ORTHO05D007335 3.6e-49 198.4 130 70.0
QL01p023545 Quercus lobata HOM05D005836 ORTHO05D007335 3.6e-49 198.4 130 70.0
Sc03g0000150 Simmondsia chinensis HOM05D005836 ORTHO05D007335 3.6e-49 198.4 130 70.0
unitig_60.g25569 Utricularia gibba HOM05D005836 ORTHO05D007335 3.6e-49 198.4 132 68.2
unitig_0.g428 Utricularia gibba HOM05D000994 ORTHO05D007335 4.7e-49 198.0 132 68.9
Eucgr.L00742 Eucalyptus grandis HOM05D005836 ORTHO05D007335 6.1e-49 197.6 129 71.3
Migut.N00709 Erythranthe guttata HOM05D005836 ORTHO05D007335 7.9e-49 197.2 129 70.5
ATR1127G006 Amborella trichopoda HOM05D005836 ORTHO05D007335 1.0e-48 196.8 131 68.7
Cfa011862 Carpinus fangiana HOM05D005836 ORTHO05D007335 1.0e-48 196.8 130 70.0
Haze_24497 Corylus avellana HOM05D005836 ORTHO05D007335 1.0e-48 196.8 130 70.0
Duzib168G0065 Durio zibethinus HOM05D005836 ORTHO05D007335 1.0e-48 196.8 130 70.0
Nitab4.5_0002985g0050 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.4e-48 196.4 131 67.9
SEGI_40201 Sequoiadendron giganteum HOM05D005836 ORTHO05D007335 1.4e-48 196.4 131 68.7
Rhsim01G0245400 Rhododendron simsii HOM05D005836 ORTHO05D007335 1.8e-48 196.1 130 70.0
Sed0001744 Sechium edule HOM05D005836 ORTHO05D007335 1.8e-48 196.1 130 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3281 Anthoceros agrestis HOM05D005836 ORTHO05D007335 2.3e-48 195.7 127 69.3
Glyma.18G049400 Glycine max HOM05D005836 ORTHO05D007335 3.0e-48 195.3 130 70.0
Oeu023901.1 Olea europaea HOM05D005836 ORTHO05D007335 3.0e-48 195.3 132 66.7
Nitab4.5_0002641g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 3.9e-48 194.9 131 67.9
GSVIVG01024524001 Vitis vinifera HOM05D005836 ORTHO05D007335 5.1e-48 194.5 130 69.2
MELO3C019598.2 Cucumis melo HOM05D005836 ORTHO05D007335 6.7e-48 194.1 130 69.2
VMungo0540G1704 Vigna mungo HOM05D005836 ORTHO05D007335 6.7e-48 194.1 130 67.7
CSS0005992 Camellia sinensis var. sinensis HOM05D005836 ORTHO05D007335 8.8e-48 193.7 130 67.7
Ca_15089_v3 Cicer arietinum L. HOM05D005836 ORTHO05D007335 8.8e-48 193.7 130 70.0
Glyma.11G201500 Glycine max HOM05D005836 ORTHO05D007335 8.8e-48 193.7 130 69.2
Solyc06g007760.4 Solanum lycopersicum HOM05D005836 ORTHO05D007335 8.8e-48 193.7 131 66.4
Sopen06g002640 Solanum pennellii HOM05D005836 ORTHO05D007335 8.8e-48 193.7 131 66.4
Gohir.D03G146100 Gossypium hirsutum HOM05D005836 ORTHO05D007335 1.1e-47 193.4 130 68.5
Actinidia34513 Actinidia chinensis HOM05D005836 ORTHO05D007335 1.5e-47 193.0 130 66.9
Lalb_Chr17g0345731 Lupinus albus HOM05D005836 ORTHO05D007335 1.5e-47 193.0 131 68.7
MD03G1046500 Malus domestica HOM05D005836 ORTHO05D007335 1.5e-47 193.0 131 67.9
CDE07G0908 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 2.0e-47 192.6 130 68.5
THA.LOC104809827 Tarenaya hassleriana HOM05D005836 ORTHO05D007335 2.0e-47 192.6 129 69.8
CiPaw.13G059700 Carya illinoinensis HOM05D005836 ORTHO05D007335 2.6e-47 192.2 130 67.7
Gohir.A03G022600 Gossypium hirsutum HOM05D005836 ORTHO05D007335 2.6e-47 192.2 130 67.7
MD11G1049300 Malus domestica HOM05D005836 ORTHO05D007335 2.6e-47 192.2 130 68.5
Mapoly0086s0004 Marchantia polymorpha HOM05D005836 ORTHO05D007335 2.6e-47 192.2 132 65.9
Phvul.006G082200 Phaseolus vulgaris HOM05D005836 ORTHO05D007335 2.6e-47 192.2 130 68.5
Peaxi162Scf00372g00716 Petunia axillaris HOM05D005836 ORTHO05D007335 3.3e-47 191.8 131 67.2
Potri.013G161000 Populus trichocarpa HOM05D005836 ORTHO05D007335 3.3e-47 191.8 129 67.4
Thhalv10014671m.g Eutrema salsugineum HOM05D005836 ORTHO05D007335 4.4e-47 191.4 129 69.8
HanXRQChr01g0013111 Helianthus annuus HOM05D005836 ORTHO05D007335 4.4e-47 191.4 131 67.2
TPR.G13816 Trifolium pratense HOM05D005836 ORTHO05D007335 5.7e-47 191.0 128 68.0
RcHm_v2.0_Chr5g0074011 Rosa chinensis HOM05D005836 ORTHO05D007335 7.4e-47 190.7 130 67.7
vmacro14659 Vaccinium macrocarpon HOM05D005836 ORTHO05D007335 9.7e-47 190.3 130 66.9
CAN.G869.16 Capsicum annuum HOM05D005836 ORTHO05D007335 1.3e-46 189.9 131 67.2
Sp6g19910 Schrenkiella parvula HOM05D005836 ORTHO05D007335 1.3e-46 189.9 129 69.0
Atru.chr10.2368 Acer truncatum HOM05D005836 ORTHO05D007335 1.7e-46 189.5 129 68.2
Ciclev10002134m.g Citrus clementina HOM05D005836 ORTHO05D007335 1.7e-46 189.5 129 69.0
Lalb_Chr10g0103941 Lupinus albus HOM05D005836 ORTHO05D007335 1.7e-46 189.5 131 68.7
Manes.18G122400 Manihot esculenta HOM05D005836 ORTHO05D007335 1.7e-46 189.5 128 68.8
PGSC0003DMG400020645 Solanum tuberosum HOM05D005836 ORTHO05D007335 1.7e-46 189.5 131 64.9
CsaV3_6G013260 Cucumis sativus L. HOM05D005836 ORTHO05D007335 2.2e-46 189.1 130 66.9
CARHR272060 Cardamine hirsuta HOM05D005836 ORTHO05D007335 2.8e-46 188.7 129 69.8
FvH4_3g41200 Fragaria vesca HOM05D005836 ORTHO05D007335 2.8e-46 188.7 131 66.4
Aqoxy2G00686 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 3.7e-46 188.3 129 67.4
Lsat_1_v5_gn_5_176900 Lactuca sativa HOM05D005836 ORTHO05D007335 3.7e-46 188.3 131 65.6
Hund16557 Selenicereus undatus HOM05D005836 ORTHO05D007335 3.7e-46 188.3 125 69.6
FAN16G0502 Fragaria x ananassa HOM05D005836 ORTHO05D007335 4.8e-46 188.0 130 66.9
FAN21G0342 Fragaria x ananassa HOM05D005836 ORTHO05D007335 4.8e-46 188.0 130 66.9
TWI31G0503 Tripterygium wilfordii HOM05D005836 ORTHO05D007335 4.8e-46 188.0 128 68.0
ClCG02G018930 Citrullus lanatus HOM05D005836 ORTHO05D007335 6.3e-46 187.6 130 67.7
Sabra13G0128800 Salix brachista HOM05D005836 ORTHO05D007335 6.3e-46 187.6 129 66.7
Peaxi162Scf00293g00715 Petunia axillaris HOM05D005836 ORTHO05D007335 8.2e-46 187.2 131 65.6
CANSAT54G2930 Cannabis sativa HOM05D005836 ORTHO05D007335 1.1e-45 186.8 130 66.9
Medtr3g062920 Medicago truncatula HOM05D005836 ORTHO05D007335 1.4e-45 186.4 129 65.9
TAR633G1361 Trochodendron aralioides HOM05D005836 ORTHO05D007335 1.4e-45 186.4 130 65.4
Aa31LG11G40 Aethionema arabicum HOM05D005836 ORTHO05D007335 2.4e-45 185.7 129 68.2
arahy.Tifrunner.gnm1.ann1.JICC5Y Arachis hypogaea HOM05D005836 ORTHO05D007335 2.4e-45 185.7 129 67.4
COL.COLO4_11235 Corchorus olitorius HOM05D005836 ORTHO05D007335 4.1e-45 184.9 130 66.9
Hma1.2p1_0161F.1_g071980 Hydrangea macrophylla HOM05D005836 ORTHO05D007335 4.1e-45 184.9 130 63.8
PSO339G6500 Papaver somniferum HOM05D005836 ORTHO05D007335 4.1e-45 184.9 129 65.9
arahy.Tifrunner.gnm1.ann1.IJ2DEQ Arachis hypogaea HOM05D005836 ORTHO05D007335 5.3e-45 184.5 129 67.4
arahy.Tifrunner.gnm1.ann1.R5IFJT Arachis hypogaea HOM05D005836 ORTHO05D007335 5.3e-45 184.5 129 67.4
DCAR_018590 Daucus carota HOM05D005836 ORTHO05D007335 5.3e-45 184.5 129 65.9
A03p12350 Brassica napus HOM05D000347 ORTHO05D001997 7.0e-45 184.1 129 67.4
BraA03t10547Z Brassica rapa HOM05D000347 ORTHO05D001997 7.0e-45 184.1 129 67.4
Lj1C109T5 Lonicera japonica HOM05D005836 ORTHO05D007335 7.0e-45 184.1 130 64.6
Psat5g146440 Pisum sativum HOM05D005836 ORTHO05D007335 7.0e-45 184.1 129 65.1
PSO384G1899 Papaver somniferum HOM05D005836 ORTHO05D007335 1.2e-44 183.3 129 65.1
BcaB01g04482 Brassica carinata HOM05D005836 ORTHO05D007335 1.5e-44 183.0 131 66.4
ECA248G3143 Erigeron canadensis HOM05D005836 ORTHO05D007335 1.5e-44 183.0 129 65.9
C03p14500 Brassica napus HOM05D000347 ORTHO05D001997 2.0e-44 182.6 126 69.0
Lj6g0005555 Lotus japonicus HOM05D005836 ORTHO05D007335 2.0e-44 182.6 130 64.6
Carub.0008s1879 Capsella rubella HOM05D005836 ORTHO05D007335 2.6e-44 182.2 128 68.0
AL8G34350 Arabidopsis lyrata HOM05D005836 ORTHO05D007335 4.5e-44 181.4 129 66.7
AT5G58250 Arabidopsis thaliana HOM05D005836 ORTHO05D007335 4.5e-44 181.4 129 66.7
MBI15_g05585_MAGBIO Magnolia biondii HOM05D005836 ORTHO05D007335 5.9e-44 181.0 119 69.7
AUR62027208 Chenopodium quinoa HOM05D005836 ORTHO05D007335 7.7e-44 180.6 127 66.1
Nn5g26758 Nelumbo nucifera HOM05D005836 ORTHO05D007335 7.7e-44 180.6 156 57.7
AUR62003260 Chenopodium quinoa HOM05D005836 ORTHO05D007335 1.0e-43 180.3 126 67.5
BcaB01g04547 Brassica carinata HOM05D005836 ORTHO05D007335 1.3e-43 179.9 126 67.5
BolC3t13893H Brassica oleracea HOM05D000347 ORTHO05D001997 1.3e-43 179.9 126 67.5
Pp3c13_24050 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.3e-43 179.9 130 64.6
BraA10t43628Z Brassica rapa HOM05D005836 ORTHO05D007335 1.7e-43 179.5 129 66.7
EL10As13g24050 Beta vulgaris HOM05D005836 ORTHO05D007335 2.2e-43 179.1 124 66.9
BcaB01g04542 Brassica carinata HOM05D005836 ORTHO05D007335 2.9e-43 178.7 129 65.9
A10p15970 Brassica napus HOM05D000347 ORTHO05D001997 3.8e-43 178.3 129 65.9
BcaC04g19899 Brassica carinata HOM05D005836 ORTHO05D007335 8.5e-43 177.2 129 65.1
C09p50080 Brassica napus HOM05D000347 ORTHO05D001997 8.5e-43 177.2 129 65.1
BolC9t57862H Brassica oleracea HOM05D005836 ORTHO05D007335 8.5e-43 177.2 129 65.1
Nitab4.5_0000195g0180 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.1e-42 176.8 131 64.1
Pp3c4_20840 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.4e-42 176.4 127 63.0
Pp3c4_20850 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.4e-42 176.4 127 63.0
Pp3c3_13470 Physcomitrium patens HOM05D005836 ORTHO05D007335 3.2e-42 175.3 130 63.1
Manes.02G210261 Manihot esculenta HOM05D005836 ORTHO05D007335 4.7e-41 171.4 129 65.1
SGA_v2.0_scaffold77G25340 Striga asiatica HOM05D005836 ORTHO05D007335 5.2e-40 167.9 136 61.8
Oeu020454.1 Olea europaea HOM05D005836 ORTHO05D007335 2.6e-39 165.6 123 62.6
Nitab4.5_0002399g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.7e-38 162.9 126 62.7
Ah.02g126180 Amaranthus hybridus HOM05D002324 ORTHO05D002380 3.1e-37 158.7 115 65.2
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.2e-28 130.2 83 75.9
Cre12.g490500 Chlamydomonas reinhardtii HOM05D005836 ORTHO05D007335 1.5e-26 123.2 132 48.5
Manes.15G179716 Manihot esculenta HOM05D005836 ORTHO05D007335 1.0e-24 117.1 75 74.7
Manes.15G179664 Manihot esculenta HOM05D005836 ORTHO05D007335 2.3e-24 115.9 74 75.7
MCO04G442 Micromonas commoda HOM05D005836 ORTHO05D007335 8.8e-24 114.0 120 47.5
Prupe.6G037800 Prunus persica HOM05D005836 ORTHO05D007335 2.6e-23 112.5 74 73.0
PRCOL_00000331 Prasinoderma coloniale HOM05D005836 ORTHO05D007335 2.2e-22 109.4 142 41.5
Peaxi162Scf00372g00721 Petunia axillaris HOM05D005836 ORTHO05D007335 9.1e-21 104.0 118 45.8
Manes.15G176000 Manihot esculenta HOM05D005836 ORTHO05D007335 1.0e-16 90.5 59 71.2
HanXRQChr11g0338221 Helianthus annuus HOM05D005836 ORTHO05D007335 2.8e-14 82.4 56 60.7
SMO173G0022 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 8.3e-14 80.9 45 80.0
CAN.G297.11 Capsicum annuum HOM05D005836 ORTHO05D000001 2.7e-12 75.9 49 63.3
Cpa.g.sc2.251 Carica papaya HOM05D005836 ORTHO05D007335 7.8e-12 74.3 54 57.4
SGA_v2.0_scaffold120G33007 Striga asiatica HOM05D002254 ORTHO05D007410 1.5e-10 70.1 51 56.9
Aqoxy392s001 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 2.5e-10 69.3 47 70.2
CAN.G297.12 Capsicum annuum HOM05D005836 ORTHO05D000001 8.0e-09 64.3 55 63.6
Actinidia23823 Actinidia chinensis HOM05D005836 ORTHO05D007335 1.5e-07 60.1 39 74.4
HPP92_024987 Vanilla planifolia HOM05D005836 ORTHO05D007335 2.9e-06 55.8 74 43.2


User provided reference genes

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