Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.5e-169 599.4 290 100.0
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 7.3e-132 474.2 287 75.6
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.5e-126 455.3 284 73.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.5e-124 449.9 290 72.1
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.9e-124 449.5 286 72.4
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 2.5e-124 449.1 286 73.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.3e-124 448.7 287 71.4
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 5.6e-124 448.0 281 74.4
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 9.6e-124 447.2 286 72.0
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.3e-123 446.8 288 71.9
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.3e-123 446.8 288 71.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.6e-123 446.4 288 73.3
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.6e-123 446.4 288 72.9
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 3.6e-123 445.3 286 72.4
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 4.8e-123 444.9 286 72.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 6.2e-123 444.5 271 75.3
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.1e-122 443.7 288 71.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.1e-122 443.7 286 71.3
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.4e-122 443.4 285 71.6
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.4e-122 443.4 285 71.6
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.8e-122 443.0 287 71.1
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.8e-122 443.0 288 71.2
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.4e-122 442.6 286 70.3
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 3.1e-122 442.2 288 71.9
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 3.1e-122 442.2 284 71.8
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 3.1e-122 442.2 286 71.7
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 4.0e-122 441.8 288 71.9
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 4.0e-122 441.8 286 72.0
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 5.3e-122 441.4 288 71.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 5.3e-122 441.4 288 70.5
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 6.9e-122 441.0 288 70.5
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.9e-122 441.0 284 72.5
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 9.0e-122 440.7 288 71.5
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.2e-121 440.3 288 70.8
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.5e-121 439.9 286 71.3
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.5e-121 439.9 286 69.6
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.5e-121 439.9 288 71.2
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.6e-121 439.1 288 70.5
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.6e-121 439.1 288 72.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 4.5e-121 438.3 286 71.3
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 4.5e-121 438.3 288 70.5
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.5e-121 438.3 288 70.5
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.5e-121 438.3 288 70.5
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 4.5e-121 438.3 281 71.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 5.8e-121 438.0 286 72.4
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 7.6e-121 437.6 288 70.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.6e-121 437.6 288 70.8
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 9.9e-121 437.2 288 69.4
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.3e-120 436.8 290 69.3
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.7e-120 436.4 288 70.1
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.7e-120 436.4 288 70.1
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 1.7e-120 436.4 281 71.2
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.2e-120 436.0 288 70.5
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.2e-120 436.0 281 70.8
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.9e-120 435.6 286 70.3
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 4.9e-120 434.9 290 69.0
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.9e-120 434.9 290 69.0
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 6.4e-120 434.5 286 68.5
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 8.4e-120 434.1 288 69.8
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.1e-119 433.7 276 71.0
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.1e-119 433.7 286 69.9
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.4e-119 433.3 286 71.3
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.4e-119 433.3 286 68.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.4e-119 433.3 286 68.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.4e-119 433.3 286 69.2
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 1.4e-119 433.3 286 71.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.9e-119 433.0 286 68.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.9e-119 433.0 281 70.5
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.4e-119 432.6 287 68.3
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 2.4e-119 432.6 281 70.1
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.4e-119 432.6 287 70.4
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.4e-119 432.6 288 68.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 4.2e-119 431.8 288 70.1
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.2e-118 430.3 317 64.7
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.1e-118 429.5 288 67.7
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.7e-118 429.1 285 70.2
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 4.6e-118 428.3 286 67.8
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 6.0e-118 427.9 288 67.4
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 6.0e-118 427.9 288 67.4
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 6.0e-118 427.9 290 70.3
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.3e-117 426.8 286 70.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 3.0e-117 425.6 286 69.6
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.7e-117 424.5 290 68.3
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.5e-116 422.5 288 70.1
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.3e-116 422.2 288 67.4
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 3.3e-116 422.2 286 66.8
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 7.4e-116 421.0 286 69.9
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-115 420.2 286 66.4
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.6e-115 419.9 272 71.3
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.8e-115 419.1 286 66.1
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 3.7e-115 418.7 286 66.1
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 4.8e-115 418.3 286 68.9
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 8.1e-115 417.5 286 66.4
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.1e-114 417.2 273 72.9
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.4e-114 416.8 275 70.9
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 5.3e-114 414.8 286 66.4
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 5.3e-114 414.8 282 68.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 5.3e-114 414.8 273 71.1
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.0e-114 414.1 278 68.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 2.6e-113 412.5 287 66.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 4.5e-113 411.8 288 65.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 4.5e-113 411.8 288 65.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 5.8e-113 411.4 288 65.3
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 5.8e-113 411.4 288 65.3
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.2e-112 409.5 285 67.0
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 3.8e-112 408.7 286 65.4
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 4.9e-112 408.3 286 65.4
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.4e-112 407.5 290 64.8
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.5e-111 406.0 273 69.2
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 2.7e-110 402.5 311 62.7
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 8.7e-109 397.5 314 63.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 4.8e-107 391.7 288 65.6
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.8e-106 389.8 247 73.3
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 4.1e-106 388.7 288 62.2
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.5e-105 385.2 274 66.4
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.9e-104 382.5 288 64.2
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 5.0e-104 381.7 288 63.9
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 9.4e-95 350.9 223 74.4
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 9.4e-87 324.3 286 53.8
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 2.0e-84 316.6 188 79.3
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.7e-83 312.4 296 54.7
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.8e-83 312.0 292 54.8
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.2e-76 290.8 308 50.3
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.7e-75 285.8 184 73.4
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 3.5e-73 279.3 291 48.5
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 4.5e-73 278.9 183 74.3
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.5e-71 273.1 186 68.3
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.5e-71 273.1 173 73.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.8e-58 230.3 309 44.0
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.3e-47 193.0 164 58.5
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.7e-43 180.6 225 44.0
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.7e-43 179.5 225 44.0
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.1e-37 159.8 102 70.6
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-34 151.4 101 67.3
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.9e-34 150.6 102 65.7
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.3e-32 143.7 96 66.7
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.3e-23 112.8 75 66.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.1e-17 94.0 167 34.7
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 8.7e-16 88.6 96 47.9
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 2.3e-08 63.9 51 60.8


User provided reference genes

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