Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 2.4e-137 492.3 269 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 2.3e-34 150.2 287 43.9
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 1.5e-33 147.5 269 39.0
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 5.5e-33 145.6 261 40.2
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 2.8e-32 143.3 267 40.1
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 3.6e-32 142.9 258 39.1
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 4.7e-32 142.5 270 38.5
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 8.0e-32 141.7 265 39.6
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.0e-31 141.4 276 37.3
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 1.0e-31 141.4 307 38.4
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 2.3e-31 140.2 280 38.9
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 3.0e-31 139.8 278 38.1
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 3.0e-31 139.8 282 37.9
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 4.0e-31 139.4 282 39.0
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 4.0e-31 139.4 253 39.1
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 5.2e-31 139.0 290 35.9
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 5.2e-31 139.0 268 39.6
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 5.2e-31 139.0 273 38.8
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 6.8e-31 138.7 280 40.4
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 6.8e-31 138.7 267 41.2
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 6.8e-31 138.7 284 38.0
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 8.8e-31 138.3 283 36.7
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 8.8e-31 138.3 291 39.2
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 1.2e-30 137.9 277 39.4
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.2e-30 137.9 269 39.8
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 1.5e-30 137.5 248 40.3
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 1.5e-30 137.5 245 40.4
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.5e-30 137.5 247 42.9
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 1.5e-30 137.5 247 42.9
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 1.5e-30 137.5 276 39.5
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 2.0e-30 137.1 287 36.6
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 2.0e-30 137.1 282 39.0
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 2.0e-30 137.1 252 42.5
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 3.4e-30 136.3 264 39.0
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 5.7e-30 135.6 263 38.0
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 5.7e-30 135.6 250 40.4
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 7.5e-30 135.2 260 39.6
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 9.8e-30 134.8 269 38.3
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 2.2e-29 133.7 267 37.8
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 2.2e-29 133.7 255 40.0
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 2.8e-29 133.3 243 41.2
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 2.8e-29 133.3 243 41.2
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 2.8e-29 133.3 287 37.3
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 2.8e-29 133.3 240 41.2
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 4.9e-29 132.5 259 40.5
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 4.9e-29 132.5 249 38.2
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 8.3e-29 131.7 248 39.1
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 8.3e-29 131.7 244 39.3
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 1.1e-28 131.3 295 37.6
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 1.1e-28 131.3 241 39.4
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 1.4e-28 131.0 253 41.1
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 1.8e-28 130.6 241 39.0
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 1.8e-28 130.6 273 38.5
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.8e-28 130.6 284 41.5
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 3.1e-28 129.8 241 39.4
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 3.1e-28 129.8 300 36.7
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 4.1e-28 129.4 245 39.6
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 5.4e-28 129.0 271 38.4
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 5.4e-28 129.0 265 39.6
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 5.4e-28 129.0 255 39.6
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 5.4e-28 129.0 282 37.6
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 5.4e-28 129.0 256 38.3
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 7.0e-28 128.6 260 38.1
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 7.0e-28 128.6 256 37.9
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 7.0e-28 128.6 256 37.9
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 7.0e-28 128.6 292 38.7
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 9.2e-28 128.3 268 35.8
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 1.2e-27 127.9 243 37.4
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 1.2e-27 127.9 293 36.9
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 1.2e-27 127.9 262 38.9
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 3.5e-27 126.3 289 35.6
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 4.5e-27 125.9 278 36.7
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 4.5e-27 125.9 289 38.4
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 4.5e-27 125.9 256 43.4
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 4.5e-27 125.9 257 38.1
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 4.5e-27 125.9 267 38.6
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 5.9e-27 125.6 249 41.0
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 7.8e-27 125.2 280 35.0
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 1.0e-26 124.8 258 37.6
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 1.0e-26 124.8 242 36.0
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.0e-26 124.8 276 35.9
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.0e-26 124.8 276 35.9
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.3e-26 124.4 237 37.1
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.3e-26 124.4 283 36.7
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.7e-26 124.0 281 36.3
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 2.3e-26 123.6 205 42.9
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 2.9e-26 123.2 265 36.2
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 2.9e-26 123.2 267 37.5
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 2.9e-26 123.2 269 38.7
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 5.0e-26 122.5 176 46.6
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 5.0e-26 122.5 273 37.4
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 5.0e-26 122.5 273 37.0
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 5.0e-26 122.5 281 34.9
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 6.6e-26 122.1 278 36.3
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 1.1e-25 121.3 241 37.3
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 1.1e-25 121.3 253 36.8
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.1e-25 121.3 273 37.4
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.1e-25 121.3 274 36.5
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.9e-25 120.6 279 35.8
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 1.9e-25 120.6 277 38.3
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.5e-25 120.2 261 39.5
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 3.3e-25 119.8 264 36.4
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 3.3e-25 119.8 280 34.6
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 4.3e-25 119.4 259 37.1
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 4.3e-25 119.4 275 34.5
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 7.3e-25 118.6 264 34.5
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 1.6e-24 117.5 276 36.6
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 1.6e-24 117.5 262 37.4
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 2.1e-24 117.1 245 35.9
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 2.8e-24 116.7 281 36.3
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 4.7e-24 115.9 258 37.2
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 1.0e-23 114.8 173 42.8
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.4e-23 114.4 275 37.8
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 1.4e-23 114.4 275 34.5
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 4.0e-23 112.8 174 49.4
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 1.5e-22 110.9 242 35.1
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 3.4e-22 109.8 254 35.8
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 3.4e-22 109.8 281 34.9
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 9.8e-22 108.2 190 41.6
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 4.9e-21 105.9 246 37.8
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 6.4e-21 105.5 253 33.6
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 1.4e-20 104.4 211 37.9
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 1.8e-20 104.0 272 34.9
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 3.2e-20 103.2 269 34.9
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 1.0e-18 98.2 220 39.5
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 6.6e-18 95.5 241 34.4
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 1.1e-17 94.7 269 38.7
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 1.6e-16 90.9 165 41.2
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 2.1e-16 90.5 285 34.0
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 4.0e-15 86.3 307 30.0
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 1.5e-14 84.3 101 46.5
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 1.1e-12 78.2 220 35.5
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 6.6e-10 68.9 101 41.6
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 6.6e-10 68.9 79 45.6
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 1.5e-09 67.8 130 36.9
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 2.1e-08 63.9 129 38.0


User provided reference genes

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