Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0275 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 3.9e-154 548.1 272 100.0
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 6.6e-37 158.7 274 44.5
SMO014G0008 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 2.4e-31 140.2 93 80.6
SMO249G0001 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 2.4e-31 140.2 93 80.6
SMO304G0102 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 2.4e-31 140.2 93 80.6
SMO304G0117 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 2.4e-31 140.2 93 80.6
SMO304G0136 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 2.4e-31 140.2 93 80.6
SMO014G0013 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 5.6e-12 75.9 57 68.4
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.9e-08 63.5 50 54.0
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.9e-08 63.5 61 47.5
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 3.8e-08 63.2 79 41.8
SMO304G0135 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 1.1e-07 61.6 52 59.6
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.4e-07 61.2 67 40.3
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.4e-07 61.2 67 40.3
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 2.4e-07 60.5 79 36.7
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 3.2e-07 60.1 61 42.6
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 5.5e-07 59.3 76 36.8
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 7.1e-07 58.9 80 35.0
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 7.1e-07 58.9 67 40.3
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 9.3e-07 58.5 79 38.0
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 9.3e-07 58.5 85 36.5
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 9.3e-07 58.5 67 38.8
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 9.3e-07 58.5 61 39.3
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 9.3e-07 58.5 50 44.0
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 9.3e-07 58.5 79 39.2
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 1.2e-06 58.2 83 37.3
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.2e-06 58.2 50 48.0
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 1.2e-06 58.2 50 48.0
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 1.2e-06 58.2 54 44.4
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 1.6e-06 57.8 74 39.2
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 1.6e-06 57.8 50 46.0
VMungo1080G1023 Vigna mungo HOM05D000764 ORTHO05D004953 1.6e-06 57.8 67 37.3
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.1e-06 57.4 58 41.4
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 2.1e-06 57.4 67 38.8
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 2.1e-06 57.4 50 46.0
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 2.1e-06 57.4 67 38.8
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 2.1e-06 57.4 67 37.3
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.1e-06 57.4 50 46.0
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 2.1e-06 57.4 76 35.5
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 2.7e-06 57.0 61 41.0
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 2.7e-06 57.0 61 41.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 2.7e-06 57.0 61 39.3
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 2.7e-06 57.0 79 39.2
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 2.7e-06 57.0 80 36.2
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 2.7e-06 57.0 61 39.3
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 2.7e-06 57.0 67 38.8
Aqoxy6G02541 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 3.5e-06 56.6 50 42.0
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 3.5e-06 56.6 50 44.0
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 3.5e-06 56.6 67 38.8
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 3.5e-06 56.6 67 38.8
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 3.5e-06 56.6 66 40.9
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 3.5e-06 56.6 51 43.1
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 4.6e-06 56.2 79 35.4
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 4.6e-06 56.2 61 39.3
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 4.6e-06 56.2 61 39.3
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 4.6e-06 56.2 61 39.3
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 4.6e-06 56.2 61 39.3
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 4.6e-06 56.2 67 37.3
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 4.6e-06 56.2 67 37.3
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 4.6e-06 56.2 44 52.3
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 4.6e-06 56.2 67 37.3
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 4.6e-06 56.2 67 37.3
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 4.6e-06 56.2 67 37.3
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 4.6e-06 56.2 79 35.4
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 4.6e-06 56.2 108 32.4
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 6.0e-06 55.8 79 36.7
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 6.0e-06 55.8 44 52.3
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 7.9e-06 55.5 50 42.0
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 7.9e-06 55.5 50 42.0
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 7.9e-06 55.5 61 41.0
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 7.9e-06 55.5 61 41.0
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 7.9e-06 55.5 73 35.6
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 7.9e-06 55.5 50 44.0
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 7.9e-06 55.5 66 37.9


User provided reference genes

Program Settings