Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 8.7e-54 213.4 108 100.0
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 9.1e-19 97.1 85 51.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 2.0e-18 95.9 80 52.5
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.6e-18 95.5 82 50.0
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 2.6e-18 95.5 79 53.2
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 4.5e-18 94.7 82 51.2
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 7.7e-18 94.0 101 45.5
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 7.7e-18 94.0 79 53.2
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 7.7e-18 94.0 79 51.9
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.3e-17 93.2 79 50.6
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.3e-17 93.2 79 51.9
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 1.3e-17 93.2 79 50.6
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 1.7e-17 92.8 79 53.2
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.7e-17 92.8 78 51.3
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.7e-17 92.8 78 52.6
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.2e-17 92.4 79 50.6
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 2.9e-17 92.0 83 48.2
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 2.9e-17 92.0 82 47.6
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 2.9e-17 92.0 79 49.4
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 2.9e-17 92.0 80 47.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 2.9e-17 92.0 85 45.9
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 3.8e-17 91.7 79 50.6
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 3.8e-17 91.7 79 50.6
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 3.8e-17 91.7 79 50.6
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 6.5e-17 90.9 78 51.3
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 8.5e-17 90.5 98 48.0
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 8.5e-17 90.5 80 48.8
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 8.5e-17 90.5 81 48.1
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-16 90.1 85 45.9
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-16 90.1 85 45.9
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 1.1e-16 90.1 79 51.9
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 1.1e-16 90.1 79 50.6
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.1e-16 90.1 74 52.7
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.1e-16 90.1 79 49.4
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.4e-16 89.7 83 49.4
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 1.4e-16 89.7 79 50.6
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.4e-16 89.7 98 43.9
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.4e-16 89.7 84 47.6
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 1.9e-16 89.4 95 46.3
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 1.9e-16 89.4 79 49.4
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 2.5e-16 89.0 78 48.7
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.5e-16 89.0 83 48.2
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 2.5e-16 89.0 79 49.4
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 3.2e-16 88.6 79 48.1
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 3.2e-16 88.6 84 47.6
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 3.2e-16 88.6 79 49.4
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 4.2e-16 88.2 79 49.4
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 4.2e-16 88.2 89 43.8
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 4.2e-16 88.2 89 43.8
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 4.2e-16 88.2 79 48.1
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.5e-16 87.8 74 52.7
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 5.5e-16 87.8 79 49.4
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 5.5e-16 87.8 79 49.4
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 5.5e-16 87.8 79 49.4
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 5.5e-16 87.8 79 49.4
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 7.2e-16 87.4 85 45.9
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 7.2e-16 87.4 85 45.9
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 7.2e-16 87.4 79 48.1
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 9.4e-16 87.0 73 52.1
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 9.4e-16 87.0 74 51.4
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 1.2e-15 86.7 74 51.4
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.2e-15 86.7 78 50.0
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.2e-15 86.7 74 52.7
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.6e-15 86.3 79 49.4
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.6e-15 86.3 78 48.7
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 2.1e-15 85.9 74 48.6
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 2.1e-15 85.9 79 48.1
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 2.7e-15 85.5 79 46.8
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 3.6e-15 85.1 85 44.7
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 3.6e-15 85.1 73 52.1
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 3.6e-15 85.1 73 52.1
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 4.7e-15 84.7 89 42.7
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 6.1e-15 84.3 74 48.6
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 8.0e-15 84.0 79 45.6
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.0e-14 83.6 74 51.4
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.0e-14 83.6 75 50.7
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.4e-14 83.2 69 50.7
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 1.4e-14 83.2 80 45.0
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 1.4e-14 83.2 80 45.0
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 1.4e-14 83.2 89 43.8
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.8e-14 82.8 81 45.7
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 3.0e-14 82.0 79 45.6
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 6.7e-14 80.9 72 50.0
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 1.5e-13 79.7 72 48.6
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.5e-13 79.7 72 48.6
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.5e-13 79.7 72 48.6
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 1.5e-13 79.7 72 48.6
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.5e-13 79.7 72 48.6
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.5e-13 79.7 74 48.6
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 2.0e-13 79.3 72 48.6
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 2.0e-13 79.3 74 45.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 2.6e-13 79.0 74 44.6
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 3.3e-13 78.6 72 48.6
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 4.4e-13 78.2 72 47.2
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 7.4e-13 77.4 72 47.2
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 7.4e-13 77.4 72 47.2
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 9.7e-13 77.0 72 47.2
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 9.7e-13 77.0 72 47.2
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.7e-12 76.3 73 45.2
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 3.7e-12 75.1 73 46.6
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 4.8e-12 74.7 87 43.7
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 1.4e-11 73.2 73 45.2
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 5.0e-09 64.7 108 34.3
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 1.1e-08 63.5 79 40.5
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 2.7e-07 58.9 73 42.5
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 4.0e-06 55.1 48 50.0


User provided reference genes

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